RNA–Protein interactions for RNA: ENST00000470363.5

HLA-C-206, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,279 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-206ENST00000470363 NISCHQ9Y2I1 1504 aa28.81■■■□□ 2.2
HLA-C-206ENST00000470363 CCDC180Q9P1Z9 1646 aa25.73■■□□□ 1.71
HLA-C-206ENST00000470363 ABCC9O60706 1549 aa25.72■■□□□ 1.71
HLA-C-206ENST00000470363 RB1CC1Q8TDY2 1594 aa24.48■■□□□ 1.51
HLA-C-206ENST00000470363 NACADO15069 1562 aa24.37■■□□□ 1.49
HLA-C-206ENST00000470363 DNAJC5BQ9UF47 199 aa24.23■■□□□ 1.47
HLA-C-206ENST00000470363 DCAF8L2P0C7V8 631 aa24.22■■□□□ 1.47
HLA-C-206ENST00000470363 MYO15BQ96JP2 1530 aa24.13■■□□□ 1.45
HLA-C-206ENST00000470363 PABPN1Q86U42 306 aaKnown RBP eCLIP24.01■■□□□ 1.43
HLA-C-206ENST00000470363 UNC13AQ9UPW8 1703 aa23.89■■□□□ 1.41
HLA-C-206ENST00000470363 ZCCHC6Q5VYS8 1495 aaKnown RBP23.88■■□□□ 1.41
HLA-C-206ENST00000470363 BICRAQ9NZM4 1560 aa23.85■■□□□ 1.41
HLA-C-206ENST00000470363 DCAF1Q9Y4B6 1507 aa23.83■■□□□ 1.41
HLA-C-206ENST00000470363 SHROOM4Q9ULL8 1493 aa23.5■■□□□ 1.35
HLA-C-206ENST00000470363 SCRIBQ14160 1630 aa23.44■■□□□ 1.34
HLA-C-206ENST00000470363 CC2D2AQ9P2K1 1620 aa23.23■■□□□ 1.31
HLA-C-206ENST00000470363 EIF4G1Q04637 1599 aaKnown RBP23.21■■□□□ 1.31
HLA-C-206ENST00000470363 CECR2Q9BXF3 1484 aa23.17■■□□□ 1.3
HLA-C-206ENST00000470363 NCAPD3P42695 1498 aa22.57■■□□□ 1.2
HLA-C-206ENST00000470363 ATAD2BQ9ULI0 1458 aa22.49■■□□□ 1.19
HLA-C-206ENST00000470363 SMARCA4P51532 1647 aa22.4■■□□□ 1.18
HLA-C-206ENST00000470363 SMARCA2P51531 1590 aa22.35■■□□□ 1.17
HLA-C-206ENST00000470363 HMGXB3Q12766 1538 aa22.33■■□□□ 1.17
HLA-C-206ENST00000470363 BAZ1AQ9NRL2 1556 aaPredicted RBP22.31■■□□□ 1.16
HLA-C-206ENST00000470363 PEG3Q9GZU2 1588 aa22.25■■□□□ 1.15
HLA-C-206ENST00000470363 MROH2BQ7Z745 1585 aa22.21■■□□□ 1.15
HLA-C-206ENST00000470363 BAZ1BQ9UIG0 1483 aaKnown RBP22.2■■□□□ 1.14
HLA-C-206ENST00000470363 DNAJC5Q9H3Z4 198 aa22.16■■□□□ 1.14
HLA-C-206ENST00000470363 CUX2O14529 1486 aa22.15■■□□□ 1.14
HLA-C-206ENST00000470363 NESP48681 1621 aa22.14■■□□□ 1.14
HLA-C-206ENST00000470363 ERCC6Q03468 1493 aa22.14■■□□□ 1.13
HLA-C-206ENST00000470363 LAMC3Q9Y6N6 1575 aa21.96■■□□□ 1.11
HLA-C-206ENST00000470363 WIZO95785 1651 aa21.88■■□□□ 1.09
HLA-C-206ENST00000470363 CADPSQ9ULU8 1353 aa21.87■■□□□ 1.09
HLA-C-206ENST00000470363 THOC2Q8NI27 1593 aaKnown RBP21.87■■□□□ 1.09
HLA-C-206ENST00000470363 PDS5BQ9NTI5 1447 aa21.85■■□□□ 1.09
HLA-C-206ENST00000470363 RSF1Q96T23 1441 aaPredicted RBP21.8■■□□□ 1.08
HLA-C-206ENST00000470363 KIF21AQ7Z4S6 1674 aa21.76■■□□□ 1.07
HLA-C-206ENST00000470363 MRC2Q9UBG0 1479 aa21.64■■□□□ 1.06
HLA-C-206ENST00000470363 CFTRP13569 1480 aa21.64■■□□□ 1.05
HLA-C-206ENST00000470363 TOP2AP11388 1531 aaKnown RBP21.62■■□□□ 1.05
HLA-C-206ENST00000470363 WDR62O43379 1518 aa21.6■■□□□ 1.05
HLA-C-206ENST00000470363 FANCD2Q9BXW9 1451 aa21.58■■□□□ 1.04
HLA-C-206ENST00000470363 CEP164Q9UPV0 1460 aa21.55■■□□□ 1.04
HLA-C-206ENST00000470363 CCDC88BA6NC98 1476 aa21.44■■□□□ 1.02
HLA-C-206ENST00000470363 URB2Q14146 1524 aaKnown RBP21.41■■□□□ 1.02
HLA-C-206ENST00000470363 PRDM2Q13029 1718 aa21.24■□□□□ 0.99
HLA-C-206ENST00000470363 OSCARQ8IYS5 282 aa21.19■□□□□ 0.98
HLA-C-206ENST00000470363 TOPBP1Q92547 1522 aa21.18■□□□□ 0.98
HLA-C-206ENST00000470363 IFT140Q96RY7 1462 aa21.15■□□□□ 0.98
HLA-C-206ENST00000470363 ZNF608Q9ULD9 1512 aaPredicted RBP21.14■□□□□ 0.98
HLA-C-206ENST00000470363 ABCC8Q09428 1581 aa21.12■□□□□ 0.97
HLA-C-206ENST00000470363 TRIM41Q8WV44 630 aa21.09■□□□□ 0.97
HLA-C-206ENST00000470363 DNMBPQ6XZF7 1577 aa21.06■□□□□ 0.96
HLA-C-206ENST00000470363 TARBP1Q13395 1621 aaKnown RBP20.99■□□□□ 0.95
HLA-C-206ENST00000470363 POLA1P09884 1462 aaPredicted RBP20.97■□□□□ 0.95
HLA-C-206ENST00000470363 AQRO60306 1485 aaKnown RBP eCLIP20.96■□□□□ 0.95
HLA-C-206ENST00000470363 EIF4G3O43432 1585 aaKnown RBP20.94■□□□□ 0.94
HLA-C-206ENST00000470363 RAD54L2Q9Y4B4 1467 aa20.9■□□□□ 0.94
HLA-C-206ENST00000470363 SOGA1O94964 1423 aa20.88■□□□□ 0.93
HLA-C-206ENST00000470363 TDRD9Q8NDG6 1382 aaKnown RBP20.85■□□□□ 0.93
HLA-C-206ENST00000470363 CUX1P39880 1505 aa20.84■□□□□ 0.93
HLA-C-206ENST00000470363 RIMBP3CA6NJZ7 1639 aa20.83■□□□□ 0.93
HLA-C-206ENST00000470363 RIMBP3BA6NNM3 1639 aa20.83■□□□□ 0.93
HLA-C-206ENST00000470363 RIMBP3Q9UFD9 1639 aa20.83■□□□□ 0.93
HLA-C-206ENST00000470363 FGD5Q6ZNL6 1462 aa20.82■□□□□ 0.92
HLA-C-206ENST00000470363 ARHGEF11O15085 1522 aa20.8■□□□□ 0.92
HLA-C-206ENST00000470363 SUPT5HO00267 1087 aaKnown RBP20.79■□□□□ 0.92
HLA-C-206ENST00000470363 FBLN2P98095 1184 aa20.74■□□□□ 0.91
HLA-C-206ENST00000470363 WDR97A6NE52 1622 aa20.74■□□□□ 0.91
HLA-C-206ENST00000470363 CHD1O14646 1710 aa20.73■□□□□ 0.91
HLA-C-206ENST00000470363 SNAPC4Q5SXM2 1469 aa20.7■□□□□ 0.9
HLA-C-206ENST00000470363 CYB5RLQ6IPT4 315 aa20.67■□□□□ 0.9
HLA-C-206ENST00000470363 GRIN2BQ13224 1484 aa20.67■□□□□ 0.9
HLA-C-206ENST00000470363 MAGI1Q96QZ7 1491 aaPredicted RBP20.66■□□□□ 0.9
HLA-C-206ENST00000470363 ABCA10Q8WWZ4 1543 aa20.63■□□□□ 0.89
HLA-C-206ENST00000470363 CHMP7Q8WUX9 453 aaPredicted RBP20.63■□□□□ 0.89
HLA-C-206ENST00000470363 ARAP1Q96P48 1450 aa20.62■□□□□ 0.89
HLA-C-206ENST00000470363 CLASP1Q7Z460 1538 aa20.61■□□□□ 0.89
HLA-C-206ENST00000470363 GAPVD1Q14C86 1478 aa20.61■□□□□ 0.89
HLA-C-206ENST00000470363 SYNJ2O15056 1496 aa20.6■□□□□ 0.89
HLA-C-206ENST00000470363 AEBP2Q6ZN18 517 aaPredicted RBP20.59■□□□□ 0.89
HLA-C-206ENST00000470363 ABCA5Q8WWZ7 1642 aa20.54■□□□□ 0.88
HLA-C-206ENST00000470363 WRNQ14191 1432 aaPredicted RBP eCLIP20.53■□□□□ 0.88
HLA-C-206ENST00000470363 SYNJ1O43426 1573 aa20.52■□□□□ 0.88
HLA-C-206ENST00000470363 TOP2BQ02880 1626 aa20.49■□□□□ 0.87
HLA-C-206ENST00000470363 PBRM1Q86U86 1689 aa20.49■□□□□ 0.87
HLA-C-206ENST00000470363 BIVM-ERCC5R4GMW8 1640 aa20.47■□□□□ 0.87
HLA-C-206ENST00000470363 GRIN2AQ12879 1464 aa20.41■□□□□ 0.86
HLA-C-206ENST00000470363 NUP160Q12769 1436 aa20.38■□□□□ 0.85
HLA-C-206ENST00000470363 ADAMTS12P58397 1594 aa20.37■□□□□ 0.85
HLA-C-206ENST00000470363 FHAD1B1AJZ9 1412 aa20.36■□□□□ 0.85
HLA-C-206ENST00000470363 TRHP20396 242 aaPredicted RBP20.35■□□□□ 0.85
HLA-C-206ENST00000470363 ERICH3Q5RHP9 1530 aa20.34■□□□□ 0.85
HLA-C-206ENST00000470363 CEP170Q5SW79 1584 aa20.32■□□□□ 0.84
HLA-C-206ENST00000470363 ERCC6L2Q5T890 1561 aa20.29■□□□□ 0.84
HLA-C-206ENST00000470363 SHROOM2Q13796 1616 aa20.24■□□□□ 0.83
HLA-C-206ENST00000470363 IGF1RP08069 1367 aa20.2■□□□□ 0.82
HLA-C-206ENST00000470363 JPH4Q96JJ6 628 aa20.19■□□□□ 0.82
HLA-C-206ENST00000470363 PRG4Q92954 1404 aaPredicted RBP20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms