RNA–Protein interactions for RNA: ENST00000264933.8

PDCD6-201, Transcript of programmed cell death 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDCD6, Length 1,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-201ENST00000264933 NISCHQ9Y2I1 1504 aa32.12■■■□□ 2.73
PDCD6-201ENST00000264933 CCDC180Q9P1Z9 1646 aa28.5■■■□□ 2.15
PDCD6-201ENST00000264933 ABCC9O60706 1549 aa28.47■■■□□ 2.15
PDCD6-201ENST00000264933 RB1CC1Q8TDY2 1594 aa27.08■■□□□ 1.93
PDCD6-201ENST00000264933 NACADO15069 1562 aa26.93■■□□□ 1.9
PDCD6-201ENST00000264933 ZCCHC6Q5VYS8 1495 aaKnown RBP26.82■■□□□ 1.88
PDCD6-201ENST00000264933 DNAJC5BQ9UF47 199 aa26.72■■□□□ 1.87
PDCD6-201ENST00000264933 DCAF8L2P0C7V8 631 aa26.71■■□□□ 1.87
PDCD6-201ENST00000264933 MYO15BQ96JP2 1530 aa26.62■■□□□ 1.85
PDCD6-201ENST00000264933 DCAF1Q9Y4B6 1507 aa26.6■■□□□ 1.85
PDCD6-201ENST00000264933 PABPN1Q86U42 306 aaKnown RBP eCLIP26.51■■□□□ 1.83
PDCD6-201ENST00000264933 UNC13AQ9UPW8 1703 aa26.5■■□□□ 1.83
PDCD6-201ENST00000264933 BICRAQ9NZM4 1560 aa26.39■■□□□ 1.82
PDCD6-201ENST00000264933 SCRIBQ14160 1630 aa25.99■■□□□ 1.75
PDCD6-201ENST00000264933 SHROOM4Q9ULL8 1493 aa25.98■■□□□ 1.75
PDCD6-201ENST00000264933 CC2D2AQ9P2K1 1620 aa25.72■■□□□ 1.71
PDCD6-201ENST00000264933 EIF4G1Q04637 1599 aaKnown RBP25.69■■□□□ 1.7
PDCD6-201ENST00000264933 CECR2Q9BXF3 1484 aa25.63■■□□□ 1.69
PDCD6-201ENST00000264933 NCAPD3P42695 1498 aa24.9■■□□□ 1.58
PDCD6-201ENST00000264933 SMARCA4P51532 1647 aa24.86■■□□□ 1.57
PDCD6-201ENST00000264933 ATAD2BQ9ULI0 1458 aa24.83■■□□□ 1.57
PDCD6-201ENST00000264933 BAZ1AQ9NRL2 1556 aaPredicted RBP24.83■■□□□ 1.57
PDCD6-201ENST00000264933 MROH2BQ7Z745 1585 aa24.79■■□□□ 1.56
PDCD6-201ENST00000264933 SMARCA2P51531 1590 aa24.71■■□□□ 1.55
PDCD6-201ENST00000264933 HMGXB3Q12766 1538 aa24.71■■□□□ 1.55
PDCD6-201ENST00000264933 PEG3Q9GZU2 1588 aa24.63■■□□□ 1.53
PDCD6-201ENST00000264933 RSF1Q96T23 1441 aaPredicted RBP24.61■■□□□ 1.53
PDCD6-201ENST00000264933 WIZO95785 1651 aa24.56■■□□□ 1.52
PDCD6-201ENST00000264933 BAZ1BQ9UIG0 1483 aaKnown RBP24.55■■□□□ 1.52
PDCD6-201ENST00000264933 ERCC6Q03468 1493 aa24.51■■□□□ 1.51
PDCD6-201ENST00000264933 NESP48681 1621 aa24.5■■□□□ 1.51
PDCD6-201ENST00000264933 CUX2O14529 1486 aa24.5■■□□□ 1.51
PDCD6-201ENST00000264933 DNAJC5Q9H3Z4 198 aa24.43■■□□□ 1.5
PDCD6-201ENST00000264933 LAMC3Q9Y6N6 1575 aa24.29■■□□□ 1.48
PDCD6-201ENST00000264933 TOP2AP11388 1531 aaKnown RBP24.25■■□□□ 1.47
PDCD6-201ENST00000264933 THOC2Q8NI27 1593 aaKnown RBP24.25■■□□□ 1.47
PDCD6-201ENST00000264933 SUPT5HO00267 1087 aaKnown RBP24.16■■□□□ 1.46
PDCD6-201ENST00000264933 KIF21AQ7Z4S6 1674 aa24.14■■□□□ 1.45
PDCD6-201ENST00000264933 CADPSQ9ULU8 1353 aa24.13■■□□□ 1.45
PDCD6-201ENST00000264933 PDS5BQ9NTI5 1447 aa24.12■■□□□ 1.45
PDCD6-201ENST00000264933 CCDC88BA6NC98 1476 aa24■■□□□ 1.43
PDCD6-201ENST00000264933 MRC2Q9UBG0 1479 aa23.95■■□□□ 1.42
PDCD6-201ENST00000264933 AEBP2Q6ZN18 517 aaPredicted RBP23.93■■□□□ 1.42
PDCD6-201ENST00000264933 WDR62O43379 1518 aa23.92■■□□□ 1.42
PDCD6-201ENST00000264933 CFTRP13569 1480 aa23.89■■□□□ 1.42
PDCD6-201ENST00000264933 FANCD2Q9BXW9 1451 aa23.85■■□□□ 1.41
PDCD6-201ENST00000264933 CEP164Q9UPV0 1460 aa23.85■■□□□ 1.41
PDCD6-201ENST00000264933 PRDM2Q13029 1718 aa23.7■■□□□ 1.39
PDCD6-201ENST00000264933 URB2Q14146 1524 aaKnown RBP23.69■■□□□ 1.38
PDCD6-201ENST00000264933 TOPBP1Q92547 1522 aa23.42■■□□□ 1.34
PDCD6-201ENST00000264933 ZNF608Q9ULD9 1512 aaPredicted RBP23.39■■□□□ 1.34
PDCD6-201ENST00000264933 IFT140Q96RY7 1462 aa23.38■■□□□ 1.33
PDCD6-201ENST00000264933 OSCARQ8IYS5 282 aa23.34■■□□□ 1.33
PDCD6-201ENST00000264933 TRIM41Q8WV44 630 aa23.32■■□□□ 1.32
PDCD6-201ENST00000264933 DNMBPQ6XZF7 1577 aa23.31■■□□□ 1.32
PDCD6-201ENST00000264933 ABCC8Q09428 1581 aa23.3■■□□□ 1.32
PDCD6-201ENST00000264933 EIF4G3O43432 1585 aaKnown RBP23.23■■□□□ 1.31
PDCD6-201ENST00000264933 CUX1P39880 1505 aa23.22■■□□□ 1.31
PDCD6-201ENST00000264933 TARBP1Q13395 1621 aaKnown RBP23.22■■□□□ 1.31
PDCD6-201ENST00000264933 POLA1P09884 1462 aaPredicted RBP23.19■■□□□ 1.3
PDCD6-201ENST00000264933 AQRO60306 1485 aaKnown RBP eCLIP23.15■■□□□ 1.31e-6■■■■□ 25.2
PDCD6-201ENST00000264933 WRNQ14191 1432 aaPredicted RBP eCLIP23.14■■□□□ 1.295e-6■■■■■ 33.4
PDCD6-201ENST00000264933 SYNJ1O43426 1573 aa23.13■■□□□ 1.29
PDCD6-201ENST00000264933 BIVM-ERCC5R4GMW8 1640 aa23.12■■□□□ 1.29
PDCD6-201ENST00000264933 RAD54L2Q9Y4B4 1467 aa23.11■■□□□ 1.29
PDCD6-201ENST00000264933 TOP2BQ02880 1626 aa23.1■■□□□ 1.29
PDCD6-201ENST00000264933 RIMBP3CA6NJZ7 1639 aa23.08■■□□□ 1.29
PDCD6-201ENST00000264933 RIMBP3BA6NNM3 1639 aa23.08■■□□□ 1.29
PDCD6-201ENST00000264933 RIMBP3Q9UFD9 1639 aa23.08■■□□□ 1.29
PDCD6-201ENST00000264933 FGD5Q6ZNL6 1462 aa23.05■■□□□ 1.28
PDCD6-201ENST00000264933 SOGA1O94964 1423 aa23.04■■□□□ 1.28
PDCD6-201ENST00000264933 ARHGEF11O15085 1522 aa23.03■■□□□ 1.28
PDCD6-201ENST00000264933 TDRD9Q8NDG6 1382 aaKnown RBP23.01■■□□□ 1.27
PDCD6-201ENST00000264933 CHD1O14646 1710 aa23.01■■□□□ 1.27
PDCD6-201ENST00000264933 WDR97A6NE52 1622 aa22.93■■□□□ 1.26
PDCD6-201ENST00000264933 SNAPC4Q5SXM2 1469 aa22.92■■□□□ 1.26
PDCD6-201ENST00000264933 FBLN2P98095 1184 aa22.89■■□□□ 1.25
PDCD6-201ENST00000264933 ABCA10Q8WWZ4 1543 aa22.86■■□□□ 1.25
PDCD6-201ENST00000264933 GRIN2BQ13224 1484 aa22.85■■□□□ 1.25
PDCD6-201ENST00000264933 MAGI1Q96QZ7 1491 aaPredicted RBP22.85■■□□□ 1.25
PDCD6-201ENST00000264933 ARAP1Q96P48 1450 aa22.84■■□□□ 1.25
PDCD6-201ENST00000264933 CHIC1Q5VXU3 224 aa22.82■■□□□ 1.24
PDCD6-201ENST00000264933 CLASP1Q7Z460 1538 aa22.82■■□□□ 1.24
PDCD6-201ENST00000264933 CYB5RLQ6IPT4 315 aa22.8■■□□□ 1.24
PDCD6-201ENST00000264933 SYNJ2O15056 1496 aa22.77■■□□□ 1.24
PDCD6-201ENST00000264933 GAPVD1Q14C86 1478 aa22.77■■□□□ 1.24
PDCD6-201ENST00000264933 ABCA5Q8WWZ7 1642 aa22.76■■□□□ 1.23
PDCD6-201ENST00000264933 CHMP7Q8WUX9 453 aaPredicted RBP22.75■■□□□ 1.23
PDCD6-201ENST00000264933 PBRM1Q86U86 1689 aa22.74■■□□□ 1.23
PDCD6-201ENST00000264933 RUSC2Q8N2Y8 1516 aa22.63■■□□□ 1.21
PDCD6-201ENST00000264933 KIF27Q86VH2 1401 aa22.6■■□□□ 1.21
PDCD6-201ENST00000264933 ADAMTS12P58397 1594 aa22.58■■□□□ 1.2
PDCD6-201ENST00000264933 ERICH3Q5RHP9 1530 aa22.57■■□□□ 1.2
PDCD6-201ENST00000264933 GRIN2AQ12879 1464 aa22.57■■□□□ 1.2
PDCD6-201ENST00000264933 IGF1RP08069 1367 aa22.55■■□□□ 1.2
PDCD6-201ENST00000264933 NUP160Q12769 1436 aa22.52■■□□□ 1.2
PDCD6-201ENST00000264933 CEP170Q5SW79 1584 aa22.51■■□□□ 1.19
PDCD6-201ENST00000264933 FHAD1B1AJZ9 1412 aa22.48■■□□□ 1.19
PDCD6-201ENST00000264933 ERCC6L2Q5T890 1561 aa22.48■■□□□ 1.19
PDCD6-201ENST00000264933 TRHP20396 242 aaPredicted RBP22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms