RNA–Protein interactions for RNA: ENST00000549606.5

CDK4-206, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2 BASIC

Gene CDK4, Length 558 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-206ENST00000549606 NISCHQ9Y2I1 1504 aa39.15■■■■□ 3.86
CDK4-206ENST00000549606 CCDC180Q9P1Z9 1646 aa35.06■■■■□ 3.2
CDK4-206ENST00000549606 ABCC9O60706 1549 aa34.94■■■■□ 3.18
CDK4-206ENST00000549606 RB1CC1Q8TDY2 1594 aa33.31■■■□□ 2.92
CDK4-206ENST00000549606 NACADO15069 1562 aa33.1■■■□□ 2.89
CDK4-206ENST00000549606 DCAF8L2P0C7V8 631 aa33.09■■■□□ 2.89
CDK4-206ENST00000549606 MYO15BQ96JP2 1530 aa32.65■■■□□ 2.82
CDK4-206ENST00000549606 UNC13AQ9UPW8 1703 aa32.61■■■□□ 2.81
CDK4-206ENST00000549606 DNAJC5BQ9UF47 199 aa32.6■■■□□ 2.81
CDK4-206ENST00000549606 PABPN1Q86U42 306 aaKnown RBP eCLIP32.57■■■□□ 2.8
CDK4-206ENST00000549606 ZCCHC6Q5VYS8 1495 aaKnown RBP32.47■■■□□ 2.79
CDK4-206ENST00000549606 BICRAQ9NZM4 1560 aa32.32■■■□□ 2.76
CDK4-206ENST00000549606 DCAF1Q9Y4B6 1507 aa32.31■■■□□ 2.76
CDK4-206ENST00000549606 SCRIBQ14160 1630 aa32.01■■■□□ 2.72
CDK4-206ENST00000549606 SHROOM4Q9ULL8 1493 aa31.84■■■□□ 2.69
CDK4-206ENST00000549606 CC2D2AQ9P2K1 1620 aa31.57■■■□□ 2.64
CDK4-206ENST00000549606 EIF4G1Q04637 1599 aaKnown RBP31.52■■■□□ 2.64
CDK4-206ENST00000549606 CECR2Q9BXF3 1484 aa31.43■■■□□ 2.62
CDK4-206ENST00000549606 NCAPD3P42695 1498 aa30.54■■■□□ 2.48
CDK4-206ENST00000549606 SMARCA4P51532 1647 aa30.52■■■□□ 2.48
CDK4-206ENST00000549606 ATAD2BQ9ULI0 1458 aa30.49■■■□□ 2.47
CDK4-206ENST00000549606 SMARCA2P51531 1590 aa30.42■■■□□ 2.46
CDK4-206ENST00000549606 BAZ1AQ9NRL2 1556 aaPredicted RBP30.39■■■□□ 2.46
CDK4-206ENST00000549606 HMGXB3Q12766 1538 aa30.33■■■□□ 2.45
CDK4-206ENST00000549606 BAZ1BQ9UIG0 1483 aaKnown RBP30.23■■■□□ 2.43
CDK4-206ENST00000549606 MROH2BQ7Z745 1585 aa30.19■■■□□ 2.42
CDK4-206ENST00000549606 PEG3Q9GZU2 1588 aa30.18■■■□□ 2.42
CDK4-206ENST00000549606 ERCC6Q03468 1493 aa30.16■■■□□ 2.42
CDK4-206ENST00000549606 NESP48681 1621 aa30.06■■■□□ 2.4
CDK4-206ENST00000549606 CUX2O14529 1486 aa29.99■■■□□ 2.39
CDK4-206ENST00000549606 WIZO95785 1651 aa29.87■■■□□ 2.37
CDK4-206ENST00000549606 LAMC3Q9Y6N6 1575 aa29.86■■■□□ 2.37
CDK4-206ENST00000549606 DNAJC5Q9H3Z4 198 aa29.8■■■□□ 2.36
CDK4-206ENST00000549606 KIF21AQ7Z4S6 1674 aa29.71■■■□□ 2.35
CDK4-206ENST00000549606 THOC2Q8NI27 1593 aaKnown RBP29.69■■■□□ 2.34
CDK4-206ENST00000549606 PDS5BQ9NTI5 1447 aa29.67■■■□□ 2.34
CDK4-206ENST00000549606 CADPSQ9ULU8 1353 aa29.64■■■□□ 2.33
CDK4-206ENST00000549606 RSF1Q96T23 1441 aaPredicted RBP29.61■■■□□ 2.33
CDK4-206ENST00000549606 TOP2AP11388 1531 aaKnown RBP29.45■■■□□ 2.31
CDK4-206ENST00000549606 MRC2Q9UBG0 1479 aa29.4■■■□□ 2.3
CDK4-206ENST00000549606 CEP164Q9UPV0 1460 aa29.34■■■□□ 2.29
CDK4-206ENST00000549606 CFTRP13569 1480 aa29.33■■■□□ 2.29
CDK4-206ENST00000549606 WDR62O43379 1518 aa29.32■■■□□ 2.28
CDK4-206ENST00000549606 FANCD2Q9BXW9 1451 aa29.32■■■□□ 2.28
CDK4-206ENST00000549606 CCDC88BA6NC98 1476 aa29.14■■■□□ 2.26
CDK4-206ENST00000549606 PRDM2Q13029 1718 aa29.11■■■□□ 2.25
CDK4-206ENST00000549606 URB2Q14146 1524 aaKnown RBP29.06■■■□□ 2.24
CDK4-206ENST00000549606 TOPBP1Q92547 1522 aa28.78■■■□□ 2.2
CDK4-206ENST00000549606 IFT140Q96RY7 1462 aa28.73■■■□□ 2.19
CDK4-206ENST00000549606 ABCC8Q09428 1581 aa28.72■■■□□ 2.19
CDK4-206ENST00000549606 OSCARQ8IYS5 282 aa28.69■■■□□ 2.18
CDK4-206ENST00000549606 DNMBPQ6XZF7 1577 aa28.69■■■□□ 2.18
CDK4-206ENST00000549606 ZNF608Q9ULD9 1512 aaPredicted RBP28.69■■■□□ 2.18
CDK4-206ENST00000549606 TRIM41Q8WV44 630 aa28.64■■■□□ 2.18
CDK4-206ENST00000549606 EIF4G3O43432 1585 aaKnown RBP28.54■■■□□ 2.16
CDK4-206ENST00000549606 SUPT5HO00267 1087 aaKnown RBP28.52■■■□□ 2.16
CDK4-206ENST00000549606 TARBP1Q13395 1621 aaKnown RBP28.51■■■□□ 2.15
CDK4-206ENST00000549606 POLA1P09884 1462 aaPredicted RBP28.49■■■□□ 2.15
CDK4-206ENST00000549606 AQRO60306 1485 aaKnown RBP eCLIP28.46■■■□□ 2.159e-10■■■■■ 41.2
CDK4-206ENST00000549606 RAD54L2Q9Y4B4 1467 aa28.41■■■□□ 2.14
CDK4-206ENST00000549606 SOGA1O94964 1423 aa28.39■■■□□ 2.14
CDK4-206ENST00000549606 FGD5Q6ZNL6 1462 aa28.35■■■□□ 2.13
CDK4-206ENST00000549606 CUX1P39880 1505 aa28.35■■■□□ 2.13
CDK4-206ENST00000549606 CHD1O14646 1710 aa28.34■■■□□ 2.13
CDK4-206ENST00000549606 TDRD9Q8NDG6 1382 aaKnown RBP28.32■■■□□ 2.12
CDK4-206ENST00000549606 RIMBP3CA6NJZ7 1639 aa28.32■■■□□ 2.12
CDK4-206ENST00000549606 RIMBP3BA6NNM3 1639 aa28.32■■■□□ 2.12
CDK4-206ENST00000549606 RIMBP3Q9UFD9 1639 aa28.32■■■□□ 2.12
CDK4-206ENST00000549606 FBLN2P98095 1184 aa28.29■■■□□ 2.12
CDK4-206ENST00000549606 ARHGEF11O15085 1522 aa28.22■■■□□ 2.11
CDK4-206ENST00000549606 WDR97A6NE52 1622 aa28.21■■■□□ 2.11
CDK4-206ENST00000549606 SNAPC4Q5SXM2 1469 aa28.16■■■□□ 2.1
CDK4-206ENST00000549606 GRIN2BQ13224 1484 aa28.1■■■□□ 2.09
CDK4-206ENST00000549606 CHMP7Q8WUX9 453 aaPredicted RBP28.08■■■□□ 2.09
CDK4-206ENST00000549606 MAGI1Q96QZ7 1491 aaPredicted RBP28.08■■■□□ 2.09
CDK4-206ENST00000549606 PBRM1Q86U86 1689 aa28.06■■■□□ 2.08
CDK4-206ENST00000549606 GAPVD1Q14C86 1478 aa28.04■■■□□ 2.08
CDK4-206ENST00000549606 CYB5RLQ6IPT4 315 aa28.04■■■□□ 2.08
CDK4-206ENST00000549606 ABCA10Q8WWZ4 1543 aa28.02■■■□□ 2.08
CDK4-206ENST00000549606 SYNJ2O15056 1496 aa27.99■■■□□ 2.07
CDK4-206ENST00000549606 SYNJ1O43426 1573 aa27.99■■■□□ 2.07
CDK4-206ENST00000549606 ABCA5Q8WWZ7 1642 aa27.97■■■□□ 2.07
CDK4-206ENST00000549606 BIVM-ERCC5R4GMW8 1640 aa27.96■■■□□ 2.07
CDK4-206ENST00000549606 WRNQ14191 1432 aaPredicted RBP eCLIP27.95■■■□□ 2.07
CDK4-206ENST00000549606 CLASP1Q7Z460 1538 aa27.95■■■□□ 2.06
CDK4-206ENST00000549606 TOP2BQ02880 1626 aa27.94■■■□□ 2.06
CDK4-206ENST00000549606 ARAP1Q96P48 1450 aa27.94■■■□□ 2.06
CDK4-206ENST00000549606 ADAMTS12P58397 1594 aa27.75■■■□□ 2.03
CDK4-206ENST00000549606 GRIN2AQ12879 1464 aa27.75■■■□□ 2.03
CDK4-206ENST00000549606 TRHP20396 242 aaPredicted RBP27.71■■■□□ 2.03
CDK4-206ENST00000549606 FHAD1B1AJZ9 1412 aa27.67■■■□□ 2.02
CDK4-206ENST00000549606 ERICH3Q5RHP9 1530 aa27.67■■■□□ 2.02
CDK4-206ENST00000549606 CEP170Q5SW79 1584 aa27.65■■■□□ 2.02
CDK4-206ENST00000549606 NUP160Q12769 1436 aa27.61■■■□□ 2.01
CDK4-206ENST00000549606 ERCC6L2Q5T890 1561 aa27.56■■■□□ 2
CDK4-206ENST00000549606 SHROOM2Q13796 1616 aa27.49■■□□□ 1.99
CDK4-206ENST00000549606 KIF27Q86VH2 1401 aa27.41■■□□□ 1.98
CDK4-206ENST00000549606 JPH4Q96JJ6 628 aa27.38■■□□□ 1.97
CDK4-206ENST00000549606 PRG4Q92954 1404 aaPredicted RBP27.38■■□□□ 1.97
CDK4-206ENST00000549606 IGF1RP08069 1367 aa27.36■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms