RNA–Protein interactions for RNA: ENST00000312990.10

CDK4-202, Transcript of cyclin dependent kinase 4, humanhuman

TSL 1 (best) BASIC

Gene CDK4, Length 1,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-202ENST00000312990 NISCHQ9Y2I1 1504 aa44.16■■■■■ 4.66
CDK4-202ENST00000312990 CCDC180Q9P1Z9 1646 aa38.96■■■■□ 3.83
CDK4-202ENST00000312990 ABCC9O60706 1549 aa37.3■■■■□ 3.56
CDK4-202ENST00000312990 ZCCHC6Q5VYS8 1495 aaKnown RBP36.98■■■■□ 3.51
CDK4-202ENST00000312990 DCAF1Q9Y4B6 1507 aa36.56■■■■□ 3.44
CDK4-202ENST00000312990 DCAF8L2P0C7V8 631 aa36.48■■■■□ 3.43
CDK4-202ENST00000312990 MYO15BQ96JP2 1530 aa36.4■■■■□ 3.42
CDK4-202ENST00000312990 NACADO15069 1562 aa36.37■■■■□ 3.41
CDK4-202ENST00000312990 RB1CC1Q8TDY2 1594 aa36.22■■■■□ 3.39
CDK4-202ENST00000312990 UNC13AQ9UPW8 1703 aa35.63■■■■□ 3.29
CDK4-202ENST00000312990 SCRIBQ14160 1630 aa35.63■■■■□ 3.29
CDK4-202ENST00000312990 SHROOM4Q9ULL8 1493 aa35.38■■■■□ 3.25
CDK4-202ENST00000312990 BICRAQ9NZM4 1560 aa35.18■■■■□ 3.22
CDK4-202ENST00000312990 PABPN1Q86U42 306 aaKnown RBP eCLIP34.95■■■■□ 3.19
CDK4-202ENST00000312990 CECR2Q9BXF3 1484 aa34.34■■■■□ 3.09
CDK4-202ENST00000312990 BAZ1AQ9NRL2 1556 aaPredicted RBP34.16■■■■□ 3.06
CDK4-202ENST00000312990 EIF4G1Q04637 1599 aaKnown RBP34.15■■■■□ 3.06
CDK4-202ENST00000312990 SMARCA4P51532 1647 aa34.14■■■■□ 3.06
CDK4-202ENST00000312990 MROH2BQ7Z745 1585 aa34.08■■■■□ 3.05
CDK4-202ENST00000312990 RSF1Q96T23 1441 aaPredicted RBP33.94■■■■□ 3.02
CDK4-202ENST00000312990 CC2D2AQ9P2K1 1620 aa33.83■■■■□ 3.01
CDK4-202ENST00000312990 WIZO95785 1651 aa33.81■■■■□ 3
CDK4-202ENST00000312990 PEG3Q9GZU2 1588 aa33.78■■■■□ 3
CDK4-202ENST00000312990 ATAD2BQ9ULI0 1458 aa33.7■■■□□ 2.98
CDK4-202ENST00000312990 SMARCA2P51531 1590 aa33.69■■■□□ 2.98
CDK4-202ENST00000312990 SUPT5HO00267 1087 aaKnown RBP33.64■■■□□ 2.98
CDK4-202ENST00000312990 NCAPD3P42695 1498 aa33.52■■■□□ 2.96
CDK4-202ENST00000312990 DNAJC5BQ9UF47 199 aa33.51■■■□□ 2.95
CDK4-202ENST00000312990 HMGXB3Q12766 1538 aa33.48■■■□□ 2.95
CDK4-202ENST00000312990 BAZ1BQ9UIG0 1483 aaKnown RBP33.46■■■□□ 2.95
CDK4-202ENST00000312990 TOP2AP11388 1531 aaKnown RBP33.42■■■□□ 2.94
CDK4-202ENST00000312990 CCDC88BA6NC98 1476 aa33.02■■■□□ 2.88
CDK4-202ENST00000312990 CFTRP13569 1480 aa32.59■■■□□ 2.81
CDK4-202ENST00000312990 PRDM2Q13029 1718 aa32.59■■■□□ 2.81
CDK4-202ENST00000312990 CADPSQ9ULU8 1353 aa32.57■■■□□ 2.81
CDK4-202ENST00000312990 NESP48681 1621 aa32.56■■■□□ 2.8
CDK4-202ENST00000312990 LAMC3Q9Y6N6 1575 aa32.55■■■□□ 2.8
CDK4-202ENST00000312990 KIF21AQ7Z4S6 1674 aa32.29■■■□□ 2.76
CDK4-202ENST00000312990 FANCD2Q9BXW9 1451 aa32.24■■■□□ 2.75
CDK4-202ENST00000312990 PDS5BQ9NTI5 1447 aa32.24■■■□□ 2.75
CDK4-202ENST00000312990 ABCC8Q09428 1581 aa32.12■■■□□ 2.73
CDK4-202ENST00000312990 CEP164Q9UPV0 1460 aa32.12■■■□□ 2.73
CDK4-202ENST00000312990 ERCC6Q03468 1493 aa32.04■■■□□ 2.72
CDK4-202ENST00000312990 WRNQ14191 1432 aaPredicted RBP eCLIP31.96■■■□□ 2.71
CDK4-202ENST00000312990 SYNJ1O43426 1573 aa31.94■■■□□ 2.7
CDK4-202ENST00000312990 THOC2Q8NI27 1593 aaKnown RBP31.93■■■□□ 2.7
CDK4-202ENST00000312990 CUX1P39880 1505 aa31.92■■■□□ 2.7
CDK4-202ENST00000312990 URB2Q14146 1524 aaKnown RBP31.91■■■□□ 2.7
CDK4-202ENST00000312990 MRC2Q9UBG0 1479 aa31.9■■■□□ 2.7
CDK4-202ENST00000312990 BIVM-ERCC5R4GMW8 1640 aa31.89■■■□□ 2.7
CDK4-202ENST00000312990 CHIC1Q5VXU3 224 aa31.89■■■□□ 2.7
CDK4-202ENST00000312990 DNMBPQ6XZF7 1577 aa31.88■■■□□ 2.69
CDK4-202ENST00000312990 TOP2BQ02880 1626 aa31.87■■■□□ 2.69
CDK4-202ENST00000312990 TOPBP1Q92547 1522 aa31.84■■■□□ 2.69
CDK4-202ENST00000312990 WDR62O43379 1518 aa31.81■■■□□ 2.68
CDK4-202ENST00000312990 TRIM41Q8WV44 630 aa31.7■■■□□ 2.67
CDK4-202ENST00000312990 FGD5Q6ZNL6 1462 aa31.66■■■□□ 2.66
CDK4-202ENST00000312990 POLA1P09884 1462 aaPredicted RBP31.63■■■□□ 2.65
CDK4-202ENST00000312990 CUX2O14529 1486 aa31.52■■■□□ 2.64
CDK4-202ENST00000312990 RAD54L2Q9Y4B4 1467 aa31.48■■■□□ 2.63
CDK4-202ENST00000312990 TARBP1Q13395 1621 aaKnown RBP31.48■■■□□ 2.63
CDK4-202ENST00000312990 WDR97A6NE52 1622 aa31.47■■■□□ 2.63
CDK4-202ENST00000312990 SOGA1O94964 1423 aa31.44■■■□□ 2.62
CDK4-202ENST00000312990 IFT140Q96RY7 1462 aa31.39■■■□□ 2.62
CDK4-202ENST00000312990 ABCA10Q8WWZ4 1543 aa31.38■■■□□ 2.61
CDK4-202ENST00000312990 RUSC2Q8N2Y8 1516 aa31.26■■■□□ 2.59
CDK4-202ENST00000312990 ABCA5Q8WWZ7 1642 aa31.25■■■□□ 2.59
CDK4-202ENST00000312990 ZNF608Q9ULD9 1512 aaPredicted RBP31.25■■■□□ 2.59
CDK4-202ENST00000312990 EIF4G3O43432 1585 aaKnown RBP31.2■■■□□ 2.59
CDK4-202ENST00000312990 KIF27Q86VH2 1401 aa31.2■■■□□ 2.59
CDK4-202ENST00000312990 TDRD9Q8NDG6 1382 aaKnown RBP31.2■■■□□ 2.58
CDK4-202ENST00000312990 PBRM1Q86U86 1689 aa31.14■■■□□ 2.58
CDK4-202ENST00000312990 AQRO60306 1485 aaKnown RBP eCLIP31.14■■■□□ 2.589e-10■■■■■ 41.2
CDK4-202ENST00000312990 GAPVD1Q14C86 1478 aa31.13■■■□□ 2.57
CDK4-202ENST00000312990 EEA1Q15075 1411 aa31.12■■■□□ 2.57
CDK4-202ENST00000312990 FAM9AQ8IZU1 332 aaPredicted RBP31.07■■■□□ 2.56
CDK4-202ENST00000312990 ERICH3Q5RHP9 1530 aa31.02■■■□□ 2.56
CDK4-202ENST00000312990 GRIN2BQ13224 1484 aa31■■■□□ 2.55
CDK4-202ENST00000312990 IGF1RP08069 1367 aa30.99■■■□□ 2.55
CDK4-202ENST00000312990 CSRNP3Q8WYN3 585 aa30.95■■■□□ 2.55
CDK4-202ENST00000312990 CUL7Q14999 1698 aa30.94■■■□□ 2.54
CDK4-202ENST00000312990 ADAMTS12P58397 1594 aa30.88■■■□□ 2.53
CDK4-202ENST00000312990 SNAPC4Q5SXM2 1469 aa30.88■■■□□ 2.53
CDK4-202ENST00000312990 PRXQ9BXM0 1461 aa30.85■■■□□ 2.53
CDK4-202ENST00000312990 MAGI1Q96QZ7 1491 aaPredicted RBP30.85■■■□□ 2.53
CDK4-202ENST00000312990 KIF21BO75037 1637 aa30.84■■■□□ 2.53
CDK4-202ENST00000312990 CARMIL1Q5VZK9 1371 aa30.81■■■□□ 2.52
CDK4-202ENST00000312990 FHAD1B1AJZ9 1412 aa30.77■■■□□ 2.52
CDK4-202ENST00000312990 RAPGEF2Q9Y4G8 1499 aa30.73■■■□□ 2.51
CDK4-202ENST00000312990 SYNJ2O15056 1496 aa30.71■■■□□ 2.51
CDK4-202ENST00000312990 CHD1O14646 1710 aa30.71■■■□□ 2.51
CDK4-202ENST00000312990 GOLGA3Q08378 1498 aa30.66■■■□□ 2.5
CDK4-202ENST00000312990 GRIN2AQ12879 1464 aa30.64■■■□□ 2.49
CDK4-202ENST00000312990 EHMT2Q96KQ7 1210 aa30.63■■■□□ 2.49
CDK4-202ENST00000312990 LOC105371045A0A1W2PR82 267 aa30.6■■■□□ 2.49
CDK4-202ENST00000312990 CHMP7Q8WUX9 453 aaPredicted RBP30.57■■■□□ 2.48
CDK4-202ENST00000312990 CTTNBP2Q8WZ74 1663 aa30.55■■■□□ 2.48
CDK4-202ENST00000312990 FBLN2P98095 1184 aa30.55■■■□□ 2.48
CDK4-202ENST00000312990 CEP170Q5SW79 1584 aa30.5■■■□□ 2.47
CDK4-202ENST00000312990 NUP160Q12769 1436 aa30.46■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms