RNA–Protein interactions for RNA: ENST00000331497.3

NGRN-201, Transcript of neugrin, neurite outgrowth associated, humanhuman

TSL 1 (best)

Gene NGRN, Length 2,784 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NGRN-201ENST00000331497 NISCHQ9Y2I1 1504 aa30.1■■■□□ 2.41
NGRN-201ENST00000331497 HRCP23327 699 aa26.53■■□□□ 1.84
NGRN-201ENST00000331497 PPARGC1BQ86YN6 1023 aaKnown RBP26.27■■□□□ 1.8
NGRN-201ENST00000331497 PCGF6Q9BYE7 350 aa26.03■■□□□ 1.76
NGRN-201ENST00000331497 PELP1Q8IZL8 1130 aaKnown RBP25.84■■□□□ 1.73
NGRN-201ENST00000331497 SHROOM4Q9ULL8 1493 aa25.82■■□□□ 1.72
NGRN-201ENST00000331497 SUPT5HO00267 1087 aaKnown RBP25.82■■□□□ 1.72
NGRN-201ENST00000331497 MYO15BQ96JP2 1530 aa25.63■■□□□ 1.69
NGRN-201ENST00000331497 CCDC180Q9P1Z9 1646 aa25.6■■□□□ 1.69
NGRN-201ENST00000331497 DCAF8L2P0C7V8 631 aa25.4■■□□□ 1.66
NGRN-201ENST00000331497 SCAF1Q9H7N4 1312 aaKnown RBP25.4■■□□□ 1.66
NGRN-201ENST00000331497 ZCCHC6Q5VYS8 1495 aaKnown RBP25.36■■□□□ 1.65
NGRN-201ENST00000331497 CHIC1Q5VXU3 224 aa25.31■■□□□ 1.64
NGRN-201ENST00000331497 LOC105371045A0A1W2PR82 267 aa24.96■■□□□ 1.59
NGRN-201ENST00000331497 DCAF1Q9Y4B6 1507 aa24.88■■□□□ 1.57
NGRN-201ENST00000331497 TRIM26Q12899 539 aaPredicted RBP24.87■■□□□ 1.57
NGRN-201ENST00000331497 MYT1Q01538 1121 aa24.81■■□□□ 1.56
NGRN-201ENST00000331497 ZEB1P37275 1124 aaPredicted RBP24.64■■□□□ 1.53
NGRN-201ENST00000331497 NEUROD1Q13562 356 aa24.6■■□□□ 1.53
NGRN-201ENST00000331497 ACIN1Q9UKV3 1341 aaKnown RBP24.57■■□□□ 1.52
NGRN-201ENST00000331497 GTF3C3Q9Y5Q9 886 aa24.51■■□□□ 1.51
NGRN-201ENST00000331497 ABCC9O60706 1549 aa24.44■■□□□ 1.5
NGRN-201ENST00000331497 SCRIBQ14160 1630 aa24.2■■□□□ 1.47
NGRN-201ENST00000331497 CENPBP07199 599 aaPredicted RBP24.16■■□□□ 1.46
NGRN-201ENST00000331497 EHMT2Q96KQ7 1210 aa24.09■■□□□ 1.45
NGRN-201ENST00000331497 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.03■■□□□ 1.44
NGRN-201ENST00000331497 DIEXFQ68CQ4 756 aaKnown RBP24.03■■□□□ 1.44
NGRN-201ENST00000331497 FAM9AQ8IZU1 332 aaPredicted RBP23.97■■□□□ 1.43
NGRN-201ENST00000331497 YTHDC1Q96MU7 727 aaKnown RBP23.93■■□□□ 1.42
NGRN-201ENST00000331497 CCER1Q8TC90 406 aaPredicted RBP23.91■■□□□ 1.42
NGRN-201ENST00000331497 NACADO15069 1562 aa23.83■■□□□ 1.41
NGRN-201ENST00000331497 RSF1Q96T23 1441 aaPredicted RBP23.74■■□□□ 1.39
NGRN-201ENST00000331497 CECR2Q9BXF3 1484 aa23.67■■□□□ 1.38
NGRN-201ENST00000331497 TRIM41Q8WV44 630 aa23.67■■□□□ 1.38
NGRN-201ENST00000331497 BCL11AQ9H165 835 aa23.58■■□□□ 1.37
NGRN-201ENST00000331497 RB1CC1Q8TDY2 1594 aa23.57■■□□□ 1.36
NGRN-201ENST00000331497 TTBK1Q5TCY1 1321 aaPredicted RBP23.56■■□□□ 1.36
NGRN-201ENST00000331497 MROH2BQ7Z745 1585 aa23.48■■□□□ 1.35
NGRN-201ENST00000331497 MIER1Q8N108 512 aa23.44■■□□□ 1.34
NGRN-201ENST00000331497 ZNF316A6NFI3 1004 aaPredicted RBP23.41■■□□□ 1.34
NGRN-201ENST00000331497 PABPN1Q86U42 306 aaKnown RBP eCLIP23.4■■□□□ 1.34
NGRN-201ENST00000331497 WIZO95785 1651 aa23.31■■□□□ 1.32
NGRN-201ENST00000331497 ANP32EQ9BTT0 268 aa23.31■■□□□ 1.32
NGRN-201ENST00000331497 UNC13AQ9UPW8 1703 aa23.26■■□□□ 1.31
NGRN-201ENST00000331497 CSRNP3Q8WYN3 585 aa23.21■■□□□ 1.31
NGRN-201ENST00000331497 SUPT16HQ9Y5B9 1047 aaKnown RBP23.18■■□□□ 1.3
NGRN-201ENST00000331497 TSHZ2Q9NRE2 1034 aa23.17■■□□□ 1.3
NGRN-201ENST00000331497 BAZ1AQ9NRL2 1556 aaPredicted RBP23.1■■□□□ 1.29
NGRN-201ENST00000331497 BICRAQ9NZM4 1560 aa23.06■■□□□ 1.28
NGRN-201ENST00000331497 SMARCA4P51532 1647 aa23■■□□□ 1.27
NGRN-201ENST00000331497 BCANQ96GW7 911 aa22.89■■□□□ 1.25
NGRN-201ENST00000331497 HNRNPUL2Q1KMD3 747 aaKnown RBP22.84■■□□□ 1.25
NGRN-201ENST00000331497 CCDC88BA6NC98 1476 aa22.83■■□□□ 1.25
NGRN-201ENST00000331497 TOP2AP11388 1531 aaKnown RBP22.82■■□□□ 1.24
NGRN-201ENST00000331497 PRKCSHP14314 528 aaPredicted RBP22.82■■□□□ 1.24
NGRN-201ENST00000331497 CLSPNQ9HAW4 1339 aa22.76■■□□□ 1.23
NGRN-201ENST00000331497 SMARCA2P51531 1590 aa22.74■■□□□ 1.23
NGRN-201ENST00000331497 ABCC8Q09428 1581 aa22.72■■□□□ 1.23
NGRN-201ENST00000331497 EIF4G1Q04637 1599 aaKnown RBP22.71■■□□□ 1.23
NGRN-201ENST00000331497 CEP162Q5TB80 1403 aa22.66■■□□□ 1.22
NGRN-201ENST00000331497 WRNQ14191 1432 aaPredicted RBP eCLIP22.65■■□□□ 1.22
NGRN-201ENST00000331497 RBM19Q9Y4C8 960 aaKnown RBP22.59■■□□□ 1.21
NGRN-201ENST00000331497 KCNH8Q96L42 1107 aa22.58■■□□□ 1.21
NGRN-201ENST00000331497 ATAD2BQ9ULI0 1458 aa22.57■■□□□ 1.2
NGRN-201ENST00000331497 FKBP8Q14318 412 aa22.57■■□□□ 1.2
NGRN-201ENST00000331497 ITGAEP38570 1179 aa22.51■■□□□ 1.19
NGRN-201ENST00000331497 UBTFP17480 764 aaKnown RBP22.5■■□□□ 1.19
NGRN-201ENST00000331497 PEG3Q9GZU2 1588 aa22.49■■□□□ 1.19
NGRN-201ENST00000331497 MSH5O43196 834 aa22.47■■□□□ 1.19
NGRN-201ENST00000331497 BAZ1BQ9UIG0 1483 aaKnown RBP22.47■■□□□ 1.19
NGRN-201ENST00000331497 SOGA1O94964 1423 aa22.44■■□□□ 1.18
NGRN-201ENST00000331497 RUSC2Q8N2Y8 1516 aa22.38■■□□□ 1.17
NGRN-201ENST00000331497 TNIKQ9UKE5 1360 aa22.35■■□□□ 1.17
NGRN-201ENST00000331497 ERICH6Q7L0X2 663 aa22.27■■□□□ 1.16
NGRN-201ENST00000331497 NEFLP07196 543 aa22.26■■□□□ 1.15
NGRN-201ENST00000331497 SYNJ1O43426 1573 aa22.21■■□□□ 1.15
NGRN-201ENST00000331497 RANGAP1P46060 587 aaPredicted RBP22.21■■□□□ 1.15
NGRN-201ENST00000331497 ANO8Q9HCE9 1232 aaPredicted RBP22.19■■□□□ 1.14
NGRN-201ENST00000331497 TRIM52Q96A61 297 aa22.18■■□□□ 1.14
NGRN-201ENST00000331497 DHX57Q6P158 1386 aaKnown RBP22.17■■□□□ 1.14
NGRN-201ENST00000331497 DEKP35659 375 aaKnown RBP22.14■■□□□ 1.14
NGRN-201ENST00000331497 NCAPD3P42695 1498 aa22.14■■□□□ 1.13
NGRN-201ENST00000331497 APLP2Q06481 763 aa22.12■■□□□ 1.13
NGRN-201ENST00000331497 DDX10Q13206 875 aaKnown RBP22.08■■□□□ 1.12
NGRN-201ENST00000331497 IRX6P78412 446 aaPredicted RBP22.06■■□□□ 1.12
NGRN-201ENST00000331497 HMGXB3Q12766 1538 aa22.03■■□□□ 1.12
NGRN-201ENST00000331497 GOLGA3Q08378 1498 aa22.03■■□□□ 1.12
NGRN-201ENST00000331497 FANCIQ9NVI1 1328 aa22.03■■□□□ 1.12
NGRN-201ENST00000331497 CLIP1P30622 1438 aa21.98■■□□□ 1.11
NGRN-201ENST00000331497 NBR1Q14596 966 aa21.97■■□□□ 1.11
NGRN-201ENST00000331497 CDK11AQ9UQ88 783 aaPredicted RBP21.96■■□□□ 1.11
NGRN-201ENST00000331497 SALL2Q9Y467 1007 aaPredicted RBP21.95■■□□□ 1.1
NGRN-201ENST00000331497 EEA1Q15075 1411 aa21.94■■□□□ 1.1
NGRN-201ENST00000331497 HIRIP3Q9BW71 556 aaPredicted RBP21.94■■□□□ 1.1
NGRN-201ENST00000331497 CCDC136Q96JN2 1154 aa21.93■■□□□ 1.1
NGRN-201ENST00000331497 VPS8Q8N3P4 1428 aa21.92■■□□□ 1.1
NGRN-201ENST00000331497 CC2D2AQ9P2K1 1620 aa21.89■■□□□ 1.09
NGRN-201ENST00000331497 CFTRP13569 1480 aa21.88■■□□□ 1.09
NGRN-201ENST00000331497 TOP2BQ02880 1626 aa21.87■■□□□ 1.09
NGRN-201ENST00000331497 RAPGEF2Q9Y4G8 1499 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms