RNA–Protein interactions for RNA: ENST00000522491.1

NDST1-206, Transcript of N-deacetylase and N-sulfotransferase 1, humanhuman

TSL 2

Gene NDST1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDST1-206ENST00000522491 NISCHQ9Y2I1 1504 aa50.65■■■■■ 5.7
NDST1-206ENST00000522491 CCDC180Q9P1Z9 1646 aa44.99■■■■■ 4.79
NDST1-206ENST00000522491 ABCC9O60706 1549 aa43.97■■■■■ 4.63
NDST1-206ENST00000522491 RB1CC1Q8TDY2 1594 aa42.31■■■■■ 4.36
NDST1-206ENST00000522491 DCAF8L2P0C7V8 631 aa42.3■■■■■ 4.36
NDST1-206ENST00000522491 NACADO15069 1562 aa42.29■■■■■ 4.36
NDST1-206ENST00000522491 ZCCHC6Q5VYS8 1495 aaKnown RBP42.2■■■■■ 4.35
NDST1-206ENST00000522491 MYO15BQ96JP2 1530 aa42.05■■■■■ 4.32
NDST1-206ENST00000522491 DCAF1Q9Y4B6 1507 aa41.9■■■■■ 4.3
NDST1-206ENST00000522491 UNC13AQ9UPW8 1703 aa41.38■■■■■ 4.22
NDST1-206ENST00000522491 PABPN1Q86U42 306 aaKnown RBP eCLIP41.12■■■■■ 4.17
NDST1-206ENST00000522491 SCRIBQ14160 1630 aa41.07■■■■■ 4.16
NDST1-206ENST00000522491 BICRAQ9NZM4 1560 aa41.06■■■■■ 4.16
NDST1-206ENST00000522491 SHROOM4Q9ULL8 1493 aa40.59■■■■■ 4.09
NDST1-206ENST00000522491 DNAJC5BQ9UF47 199 aa40.33■■■■■ 4.05
NDST1-206ENST00000522491 EIF4G1Q04637 1599 aaKnown RBP39.96■■■■□ 3.99
NDST1-206ENST00000522491 CC2D2AQ9P2K1 1620 aa39.79■■■■□ 3.96
NDST1-206ENST00000522491 CECR2Q9BXF3 1484 aa39.49■■■■□ 3.91
NDST1-206ENST00000522491 SMARCA4P51532 1647 aa39.29■■■■□ 3.88
NDST1-206ENST00000522491 BAZ1AQ9NRL2 1556 aaPredicted RBP39.25■■■■□ 3.87
NDST1-206ENST00000522491 ATAD2BQ9ULI0 1458 aa39.06■■■■□ 3.84
NDST1-206ENST00000522491 MROH2BQ7Z745 1585 aa39.04■■■■□ 3.84
NDST1-206ENST00000522491 NCAPD3P42695 1498 aa39.03■■■■□ 3.84
NDST1-206ENST00000522491 SMARCA2P51531 1590 aa39■■■■□ 3.83
NDST1-206ENST00000522491 PEG3Q9GZU2 1588 aa38.91■■■■□ 3.82
NDST1-206ENST00000522491 HMGXB3Q12766 1538 aa38.84■■■■□ 3.81
NDST1-206ENST00000522491 BAZ1BQ9UIG0 1483 aaKnown RBP38.74■■■■□ 3.79
NDST1-206ENST00000522491 WIZO95785 1651 aa38.63■■■■□ 3.77
NDST1-206ENST00000522491 RSF1Q96T23 1441 aaPredicted RBP38.63■■■■□ 3.77
NDST1-206ENST00000522491 TOP2AP11388 1531 aaKnown RBP38.21■■■■□ 3.71
NDST1-206ENST00000522491 NESP48681 1621 aa38.09■■■■□ 3.69
NDST1-206ENST00000522491 LAMC3Q9Y6N6 1575 aa37.98■■■■□ 3.67
NDST1-206ENST00000522491 CADPSQ9ULU8 1353 aa37.89■■■■□ 3.66
NDST1-206ENST00000522491 ERCC6Q03468 1493 aa37.89■■■■□ 3.66
NDST1-206ENST00000522491 CCDC88BA6NC98 1476 aa37.78■■■■□ 3.64
NDST1-206ENST00000522491 PDS5BQ9NTI5 1447 aa37.72■■■■□ 3.63
NDST1-206ENST00000522491 SUPT5HO00267 1087 aaKnown RBP37.7■■■■□ 3.63
NDST1-206ENST00000522491 CFTRP13569 1480 aa37.68■■■■□ 3.62
NDST1-206ENST00000522491 KIF21AQ7Z4S6 1674 aa37.63■■■■□ 3.62
NDST1-206ENST00000522491 THOC2Q8NI27 1593 aaKnown RBP37.48■■■■□ 3.59
NDST1-206ENST00000522491 CUX2O14529 1486 aa37.45■■■■□ 3.59
NDST1-206ENST00000522491 FANCD2Q9BXW9 1451 aa37.45■■■■□ 3.59
NDST1-206ENST00000522491 PRDM2Q13029 1718 aa37.4■■■■□ 3.58
NDST1-206ENST00000522491 CEP164Q9UPV0 1460 aa37.39■■■■□ 3.58
NDST1-206ENST00000522491 MRC2Q9UBG0 1479 aa37.33■■■■□ 3.57
NDST1-206ENST00000522491 WDR62O43379 1518 aa37.21■■■■□ 3.55
NDST1-206ENST00000522491 URB2Q14146 1524 aaKnown RBP37.09■■■■□ 3.53
NDST1-206ENST00000522491 TOPBP1Q92547 1522 aa36.87■■■■□ 3.49
NDST1-206ENST00000522491 ABCC8Q09428 1581 aa36.86■■■■□ 3.49
NDST1-206ENST00000522491 DNMBPQ6XZF7 1577 aa36.83■■■■□ 3.49
NDST1-206ENST00000522491 CUX1P39880 1505 aa36.63■■■■□ 3.45
NDST1-206ENST00000522491 IFT140Q96RY7 1462 aa36.61■■■■□ 3.45
NDST1-206ENST00000522491 POLA1P09884 1462 aaPredicted RBP36.56■■■■□ 3.44
NDST1-206ENST00000522491 FGD5Q6ZNL6 1462 aa36.49■■■■□ 3.43
NDST1-206ENST00000522491 TARBP1Q13395 1621 aaKnown RBP36.47■■■■□ 3.43
NDST1-206ENST00000522491 ZNF608Q9ULD9 1512 aaPredicted RBP36.46■■■■□ 3.43
NDST1-206ENST00000522491 SOGA1O94964 1423 aa36.42■■■■□ 3.42
NDST1-206ENST00000522491 RAD54L2Q9Y4B4 1467 aa36.41■■■■□ 3.42
NDST1-206ENST00000522491 WRNQ14191 1432 aaPredicted RBP eCLIP36.41■■■■□ 3.42
NDST1-206ENST00000522491 SYNJ1O43426 1573 aa36.32■■■■□ 3.41
NDST1-206ENST00000522491 TOP2BQ02880 1626 aa36.32■■■■□ 3.4
NDST1-206ENST00000522491 BIVM-ERCC5R4GMW8 1640 aa36.32■■■■□ 3.4
NDST1-206ENST00000522491 EIF4G3O43432 1585 aaKnown RBP36.31■■■■□ 3.4
NDST1-206ENST00000522491 AQRO60306 1485 aaKnown RBP eCLIP36.26■■■■□ 3.47e-9■■■■■ 34.8
NDST1-206ENST00000522491 DNAJC5Q9H3Z4 198 aa36.26■■■■□ 3.4
NDST1-206ENST00000522491 TDRD9Q8NDG6 1382 aaKnown RBP36.21■■■■□ 3.39
NDST1-206ENST00000522491 WDR97A6NE52 1622 aa36.18■■■■□ 3.38
NDST1-206ENST00000522491 ABCA10Q8WWZ4 1543 aa36.13■■■■□ 3.37
NDST1-206ENST00000522491 GAPVD1Q14C86 1478 aa35.99■■■■□ 3.35
NDST1-206ENST00000522491 ABCA5Q8WWZ7 1642 aa35.98■■■■□ 3.35
NDST1-206ENST00000522491 GRIN2BQ13224 1484 aa35.98■■■■□ 3.35
NDST1-206ENST00000522491 OSCARQ8IYS5 282 aa35.94■■■■□ 3.34
NDST1-206ENST00000522491 SNAPC4Q5SXM2 1469 aa35.92■■■■□ 3.34
NDST1-206ENST00000522491 PBRM1Q86U86 1689 aa35.91■■■■□ 3.34
NDST1-206ENST00000522491 MAGI1Q96QZ7 1491 aaPredicted RBP35.87■■■■□ 3.33
NDST1-206ENST00000522491 CHD1O14646 1710 aa35.85■■■■□ 3.33
NDST1-206ENST00000522491 FBLN2P98095 1184 aa35.81■■■■□ 3.32
NDST1-206ENST00000522491 SYNJ2O15056 1496 aa35.73■■■■□ 3.31
NDST1-206ENST00000522491 CHMP7Q8WUX9 453 aaPredicted RBP35.72■■■■□ 3.31
NDST1-206ENST00000522491 ERICH3Q5RHP9 1530 aa35.7■■■■□ 3.31
NDST1-206ENST00000522491 KIF27Q86VH2 1401 aa35.64■■■■□ 3.3
NDST1-206ENST00000522491 ADAMTS12P58397 1594 aa35.63■■■■□ 3.29
NDST1-206ENST00000522491 TRIM41Q8WV44 630 aa35.6■■■■□ 3.29
NDST1-206ENST00000522491 FHAD1B1AJZ9 1412 aa35.57■■■■□ 3.29
NDST1-206ENST00000522491 GRIN2AQ12879 1464 aa35.52■■■■□ 3.28
NDST1-206ENST00000522491 IGF1RP08069 1367 aa35.51■■■■□ 3.27
NDST1-206ENST00000522491 CLASP1Q7Z460 1538 aa35.46■■■■□ 3.27
NDST1-206ENST00000522491 CUL7Q14999 1698 aa35.39■■■■□ 3.26
NDST1-206ENST00000522491 NUP160Q12769 1436 aa35.36■■■■□ 3.25
NDST1-206ENST00000522491 RUSC2Q8N2Y8 1516 aa35.36■■■■□ 3.25
NDST1-206ENST00000522491 ARHGEF11O15085 1522 aa35.35■■■■□ 3.25
NDST1-206ENST00000522491 RIMBP3CA6NJZ7 1639 aa35.35■■■■□ 3.25
NDST1-206ENST00000522491 RIMBP3BA6NNM3 1639 aa35.35■■■■□ 3.25
NDST1-206ENST00000522491 RIMBP3Q9UFD9 1639 aa35.35■■■■□ 3.25
NDST1-206ENST00000522491 CEP170Q5SW79 1584 aa35.34■■■■□ 3.25
NDST1-206ENST00000522491 CARMIL1Q5VZK9 1371 aa35.29■■■■□ 3.24
NDST1-206ENST00000522491 CHIC1Q5VXU3 224 aa35.22■■■■□ 3.23
NDST1-206ENST00000522491 SHROOM2Q13796 1616 aa35.08■■■■□ 3.21
NDST1-206ENST00000522491 RAPGEF2Q9Y4G8 1499 aa35.08■■■■□ 3.21
NDST1-206ENST00000522491 ARAP1Q96P48 1450 aa35.07■■■■□ 3.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms