RNA–Protein interactions for RNA: ENST00000512466.1

PDCD6-209, Transcript of programmed cell death 6, humanhuman

TSL 2

Gene PDCD6, Length 3,763 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-209ENST00000512466 NISCHQ9Y2I1 1504 aa21.08■□□□□ 0.97
PDCD6-209ENST00000512466 SHROOM4Q9ULL8 1493 aa18.45■□□□□ 0.54
PDCD6-209ENST00000512466 SUPT5HO00267 1087 aaKnown RBP18.42■□□□□ 0.54
PDCD6-209ENST00000512466 DCAF8L2P0C7V8 631 aa18.36■□□□□ 0.53
PDCD6-209ENST00000512466 CCDC180Q9P1Z9 1646 aa18.2■□□□□ 0.5
PDCD6-209ENST00000512466 ABCC9O60706 1549 aa17.85■□□□□ 0.45
PDCD6-209ENST00000512466 PCGF6Q9BYE7 350 aa17.7■□□□□ 0.42
PDCD6-209ENST00000512466 ZCCHC6Q5VYS8 1495 aaKnown RBP17.59■□□□□ 0.41
PDCD6-209ENST00000512466 EHMT2Q96KQ7 1210 aa17.58■□□□□ 0.4
PDCD6-209ENST00000512466 PPARGC1BQ86YN6 1023 aaKnown RBP17.4■□□□□ 0.38
PDCD6-209ENST00000512466 HRCP23327 699 aa17.29■□□□□ 0.36
PDCD6-209ENST00000512466 CHIC1Q5VXU3 224 aa17.28■□□□□ 0.36
PDCD6-209ENST00000512466 LOC105371045A0A1W2PR82 267 aa17.28■□□□□ 0.36
PDCD6-209ENST00000512466 FAM9AQ8IZU1 332 aaPredicted RBP17.25■□□□□ 0.35
PDCD6-209ENST00000512466 DCAF1Q9Y4B6 1507 aa17.24■□□□□ 0.35
PDCD6-209ENST00000512466 NACADO15069 1562 aa17.19■□□□□ 0.34
PDCD6-209ENST00000512466 RB1CC1Q8TDY2 1594 aa17.14■□□□□ 0.33
PDCD6-209ENST00000512466 MYO15BQ96JP2 1530 aa17.06■□□□□ 0.32
PDCD6-209ENST00000512466 SCRIBQ14160 1630 aa17.03■□□□□ 0.32
PDCD6-209ENST00000512466 PABPN1Q86U42 306 aaKnown RBP eCLIP17.01■□□□□ 0.31
PDCD6-209ENST00000512466 TTBK1Q5TCY1 1321 aaPredicted RBP16.99■□□□□ 0.31
PDCD6-209ENST00000512466 TRIM41Q8WV44 630 aa16.83■□□□□ 0.28
PDCD6-209ENST00000512466 PELP1Q8IZL8 1130 aaKnown RBP16.82■□□□□ 0.28
PDCD6-209ENST00000512466 TRIM26Q12899 539 aaPredicted RBP16.78■□□□□ 0.28
PDCD6-209ENST00000512466 CCER1Q8TC90 406 aaPredicted RBP16.58■□□□□ 0.24
PDCD6-209ENST00000512466 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.51■□□□□ 0.23
PDCD6-209ENST00000512466 ZEB1P37275 1124 aaPredicted RBP16.51■□□□□ 0.23
PDCD6-209ENST00000512466 CECR2Q9BXF3 1484 aa16.47■□□□□ 0.23
PDCD6-209ENST00000512466 RANGAP1P46060 587 aaPredicted RBP16.45■□□□□ 0.22
PDCD6-209ENST00000512466 YTHDC1Q96MU7 727 aaKnown RBP16.42■□□□□ 0.22
PDCD6-209ENST00000512466 RSF1Q96T23 1441 aaPredicted RBP16.4■□□□□ 0.22
PDCD6-209ENST00000512466 UNC13AQ9UPW8 1703 aa16.37■□□□□ 0.21
PDCD6-209ENST00000512466 BICRAQ9NZM4 1560 aa16.37■□□□□ 0.21
PDCD6-209ENST00000512466 BAZ1AQ9NRL2 1556 aaPredicted RBP16.34■□□□□ 0.21
PDCD6-209ENST00000512466 MROH2BQ7Z745 1585 aa16.3■□□□□ 0.2
PDCD6-209ENST00000512466 UBTFP17480 764 aaKnown RBP16.26■□□□□ 0.19
PDCD6-209ENST00000512466 SCAF1Q9H7N4 1312 aaKnown RBP16.25■□□□□ 0.19
PDCD6-209ENST00000512466 MYT1Q01538 1121 aa16.23■□□□□ 0.19
PDCD6-209ENST00000512466 CENPBP07199 599 aaPredicted RBP16.2■□□□□ 0.18
PDCD6-209ENST00000512466 SMARCA4P51532 1647 aa16.16■□□□□ 0.18
PDCD6-209ENST00000512466 DIEXFQ68CQ4 756 aaKnown RBP16.16■□□□□ 0.18
PDCD6-209ENST00000512466 GTF3C3Q9Y5Q9 886 aa16.14■□□□□ 0.17
PDCD6-209ENST00000512466 HNRNPUL2Q1KMD3 747 aaKnown RBP16.13■□□□□ 0.17
PDCD6-209ENST00000512466 WIZO95785 1651 aa16.11■□□□□ 0.17
PDCD6-209ENST00000512466 BAZ1BQ9UIG0 1483 aaKnown RBP16.1■□□□□ 0.17
PDCD6-209ENST00000512466 EIF4G1Q04637 1599 aaKnown RBP16.07■□□□□ 0.16
PDCD6-209ENST00000512466 NEUROD1Q13562 356 aa16.07■□□□□ 0.16
PDCD6-209ENST00000512466 APLP2Q06481 763 aa16.06■□□□□ 0.16
PDCD6-209ENST00000512466 ATAD2BQ9ULI0 1458 aa16.06■□□□□ 0.16
PDCD6-209ENST00000512466 SMARCA2P51531 1590 aa16.05■□□□□ 0.16
PDCD6-209ENST00000512466 ACIN1Q9UKV3 1341 aaKnown RBP16.01■□□□□ 0.15
PDCD6-209ENST00000512466 TOP2AP11388 1531 aaKnown RBP15.95■□□□□ 0.14
PDCD6-209ENST00000512466 NCAPD3P42695 1498 aa15.91■□□□□ 0.14
PDCD6-209ENST00000512466 CCDC88BA6NC98 1476 aa15.9■□□□□ 0.14
PDCD6-209ENST00000512466 CC2D2AQ9P2K1 1620 aa15.88■□□□□ 0.13
PDCD6-209ENST00000512466 ITGAEP38570 1179 aa15.87■□□□□ 0.13
PDCD6-209ENST00000512466 DNAJC5BQ9UF47 199 aa15.8■□□□□ 0.12
PDCD6-209ENST00000512466 PEG3Q9GZU2 1588 aa15.8■□□□□ 0.12
PDCD6-209ENST00000512466 ZNF316A6NFI3 1004 aaPredicted RBP15.78■□□□□ 0.12
PDCD6-209ENST00000512466 HMGXB3Q12766 1538 aa15.76■□□□□ 0.11
PDCD6-209ENST00000512466 ATP1B4Q9UN42 357 aaPredicted RBP15.75■□□□□ 0.11
PDCD6-209ENST00000512466 MIER1Q8N108 512 aa15.71■□□□□ 0.1
PDCD6-209ENST00000512466 CSRNP3Q8WYN3 585 aa15.69■□□□□ 0.1
PDCD6-209ENST00000512466 CADPSQ9ULU8 1353 aa15.67■□□□□ 0.1
PDCD6-209ENST00000512466 BCANQ96GW7 911 aa15.62■□□□□ 0.09
PDCD6-209ENST00000512466 WRNQ14191 1432 aaPredicted RBP eCLIP15.58■□□□□ 0.089e-6■■■■■ 50.1
PDCD6-209ENST00000512466 ABCC8Q09428 1581 aa15.52■□□□□ 0.08
PDCD6-209ENST00000512466 PDS5BQ9NTI5 1447 aa15.52■□□□□ 0.08
PDCD6-209ENST00000512466 CFTRP13569 1480 aa15.52■□□□□ 0.08
PDCD6-209ENST00000512466 CEP162Q5TB80 1403 aa15.5■□□□□ 0.07
PDCD6-209ENST00000512466 NESP48681 1621 aa15.48■□□□□ 0.07
PDCD6-209ENST00000512466 SOGA1O94964 1423 aa15.48■□□□□ 0.07
PDCD6-209ENST00000512466 ERCC6Q03468 1493 aa15.46■□□□□ 0.07
PDCD6-209ENST00000512466 FANCD2Q9BXW9 1451 aa15.46■□□□□ 0.06
PDCD6-209ENST00000512466 CNGB1Q14028 1251 aaPredicted RBP15.41■□□□□ 0.06
PDCD6-209ENST00000512466 CEP164Q9UPV0 1460 aa15.4■□□□□ 0.06
PDCD6-209ENST00000512466 HIRIP3Q9BW71 556 aaPredicted RBP15.38■□□□□ 0.05
PDCD6-209ENST00000512466 FAM50AQ14320 339 aaKnown RBP15.36■□□□□ 0.05
PDCD6-209ENST00000512466 LAMC3Q9Y6N6 1575 aa15.34■□□□□ 0.05
PDCD6-209ENST00000512466 NEFLP07196 543 aa15.34■□□□□ 0.05
PDCD6-209ENST00000512466 P3H3Q8IVL6 736 aa15.34■□□□□ 0.05
PDCD6-209ENST00000512466 RUSC2Q8N2Y8 1516 aa15.32■□□□□ 0.04
PDCD6-209ENST00000512466 BCL11AQ9H165 835 aa15.31■□□□□ 0.04
PDCD6-209ENST00000512466 DDX10Q13206 875 aaKnown RBP15.29■□□□□ 0.04
PDCD6-209ENST00000512466 TNIKQ9UKE5 1360 aa15.28■□□□□ 0.04
PDCD6-209ENST00000512466 CLIP1P30622 1438 aa15.27■□□□□ 0.04
PDCD6-209ENST00000512466 EEA1Q15075 1411 aa15.27■□□□□ 0.03
PDCD6-209ENST00000512466 KIF27Q86VH2 1401 aa15.26■□□□□ 0.03
PDCD6-209ENST00000512466 ERICH6Q7L0X2 663 aa15.26■□□□□ 0.03
PDCD6-209ENST00000512466 SYNJ1O43426 1573 aa15.25■□□□□ 0.03
PDCD6-209ENST00000512466 FKBP8Q14318 412 aa15.24■□□□□ 0.03
PDCD6-209ENST00000512466 TRIM52Q96A61 297 aa15.24■□□□□ 0.03
PDCD6-209ENST00000512466 CUX2O14529 1486 aa15.24■□□□□ 0.03
PDCD6-209ENST00000512466 CUX1P39880 1505 aa15.23■□□□□ 0.03
PDCD6-209ENST00000512466 FBLN2P98095 1184 aa15.21■□□□□ 0.03
PDCD6-209ENST00000512466 FGD5Q6ZNL6 1462 aa15.21■□□□□ 0.03
PDCD6-209ENST00000512466 KCNH8Q96L42 1107 aa15.2■□□□□ 0.02
PDCD6-209ENST00000512466 TDRD9Q8NDG6 1382 aaKnown RBP15.19■□□□□ 0.02
PDCD6-209ENST00000512466 TOPBP1Q92547 1522 aa15.18■□□□□ 0.02
PDCD6-209ENST00000512466 TOP2BQ02880 1626 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms