RNA–Protein interactions for RNA: ENST00000430407.1

RCC1-209, Transcript of regulator of chromosome condensation 1, humanhuman

TSL 5

Gene RCC1, Length 1,121 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-209ENST00000430407 NISCHQ9Y2I1 1504 aa43.43■■■■■ 4.54
RCC1-209ENST00000430407 ABCC9O60706 1549 aa39.12■■■■□ 3.85
RCC1-209ENST00000430407 CCDC180Q9P1Z9 1646 aa38.94■■■■□ 3.82
RCC1-209ENST00000430407 RB1CC1Q8TDY2 1594 aa37.2■■■■□ 3.55
RCC1-209ENST00000430407 DCAF8L2P0C7V8 631 aa36.91■■■■□ 3.5
RCC1-209ENST00000430407 NACADO15069 1562 aa36.91■■■■□ 3.5
RCC1-209ENST00000430407 DNAJC5BQ9UF47 199 aa36.7■■■■□ 3.47
RCC1-209ENST00000430407 PABPN1Q86U42 306 aaKnown RBP eCLIP36.46■■■■□ 3.43
RCC1-209ENST00000430407 MYO15BQ96JP2 1530 aa36.36■■■■□ 3.41
RCC1-209ENST00000430407 UNC13AQ9UPW8 1703 aa36.14■■■■□ 3.38
RCC1-209ENST00000430407 BICRAQ9NZM4 1560 aa35.99■■■■□ 3.35
RCC1-209ENST00000430407 ZCCHC6Q5VYS8 1495 aaKnown RBP35.96■■■■□ 3.35
RCC1-209ENST00000430407 DCAF1Q9Y4B6 1507 aa35.86■■■■□ 3.33
RCC1-209ENST00000430407 SHROOM4Q9ULL8 1493 aa35.62■■■■□ 3.29
RCC1-209ENST00000430407 SCRIBQ14160 1630 aa35.53■■■■□ 3.28
RCC1-209ENST00000430407 CC2D2AQ9P2K1 1620 aa35.27■■■■□ 3.24
RCC1-209ENST00000430407 CECR2Q9BXF3 1484 aa35.26■■■■□ 3.23
RCC1-209ENST00000430407 EIF4G1Q04637 1599 aaKnown RBP35.19■■■■□ 3.22
RCC1-209ENST00000430407 NCAPD3P42695 1498 aa34.08■■■■□ 3.05
RCC1-209ENST00000430407 ATAD2BQ9ULI0 1458 aa33.95■■■■□ 3.03
RCC1-209ENST00000430407 SMARCA2P51531 1590 aa33.89■■■■□ 3.02
RCC1-209ENST00000430407 ERCC6Q03468 1493 aa33.86■■■■□ 3.01
RCC1-209ENST00000430407 SMARCA4P51532 1647 aa33.86■■■■□ 3.01
RCC1-209ENST00000430407 DNAJC5Q9H3Z4 198 aa33.85■■■■□ 3.01
RCC1-209ENST00000430407 HMGXB3Q12766 1538 aa33.79■■■■□ 3
RCC1-209ENST00000430407 CUX2O14529 1486 aa33.76■■■□□ 2.99
RCC1-209ENST00000430407 BAZ1AQ9NRL2 1556 aaPredicted RBP33.75■■■□□ 2.99
RCC1-209ENST00000430407 BAZ1BQ9UIG0 1483 aaKnown RBP33.67■■■□□ 2.98
RCC1-209ENST00000430407 NESP48681 1621 aa33.53■■■□□ 2.96
RCC1-209ENST00000430407 PEG3Q9GZU2 1588 aa33.51■■■□□ 2.96
RCC1-209ENST00000430407 MROH2BQ7Z745 1585 aa33.44■■■□□ 2.94
RCC1-209ENST00000430407 LAMC3Q9Y6N6 1575 aa33.31■■■□□ 2.92
RCC1-209ENST00000430407 PDS5BQ9NTI5 1447 aa33.21■■■□□ 2.91
RCC1-209ENST00000430407 THOC2Q8NI27 1593 aaKnown RBP33.15■■■□□ 2.9
RCC1-209ENST00000430407 CADPSQ9ULU8 1353 aa33.09■■■□□ 2.89
RCC1-209ENST00000430407 KIF21AQ7Z4S6 1674 aa33.03■■■□□ 2.88
RCC1-209ENST00000430407 WIZO95785 1651 aa33.01■■■□□ 2.88
RCC1-209ENST00000430407 MRC2Q9UBG0 1479 aa32.87■■■□□ 2.85
RCC1-209ENST00000430407 RSF1Q96T23 1441 aaPredicted RBP32.77■■■□□ 2.84
RCC1-209ENST00000430407 CEP164Q9UPV0 1460 aa32.74■■■□□ 2.83
RCC1-209ENST00000430407 WDR62O43379 1518 aa32.73■■■□□ 2.83
RCC1-209ENST00000430407 FANCD2Q9BXW9 1451 aa32.69■■■□□ 2.82
RCC1-209ENST00000430407 CFTRP13569 1480 aa32.65■■■□□ 2.82
RCC1-209ENST00000430407 TOP2AP11388 1531 aaKnown RBP32.64■■■□□ 2.82
RCC1-209ENST00000430407 TRIM41Q8WV44 630 aa32.41■■■□□ 2.78
RCC1-209ENST00000430407 URB2Q14146 1524 aaKnown RBP32.36■■■□□ 2.77
RCC1-209ENST00000430407 OSCARQ8IYS5 282 aa32.3■■■□□ 2.76
RCC1-209ENST00000430407 CCDC88BA6NC98 1476 aa32.29■■■□□ 2.76
RCC1-209ENST00000430407 PRDM2Q13029 1718 aa32.17■■■□□ 2.74
RCC1-209ENST00000430407 IFT140Q96RY7 1462 aa32.1■■■□□ 2.73
RCC1-209ENST00000430407 ABCC8Q09428 1581 aa32.03■■■□□ 2.72
RCC1-209ENST00000430407 TOPBP1Q92547 1522 aa32.03■■■□□ 2.72
RCC1-209ENST00000430407 ZNF608Q9ULD9 1512 aaPredicted RBP31.99■■■□□ 2.71
RCC1-209ENST00000430407 DNMBPQ6XZF7 1577 aa31.9■■■□□ 2.7
RCC1-209ENST00000430407 EIF4G3O43432 1585 aaKnown RBP31.79■■■□□ 2.68
RCC1-209ENST00000430407 SUPT5HO00267 1087 aaKnown RBP31.76■■■□□ 2.67
RCC1-209ENST00000430407 AQRO60306 1485 aaKnown RBP eCLIP31.74■■■□□ 2.672e-9■■■■■ 47.5
RCC1-209ENST00000430407 RIMBP3CA6NJZ7 1639 aa31.71■■■□□ 2.67
RCC1-209ENST00000430407 RIMBP3BA6NNM3 1639 aa31.71■■■□□ 2.67
RCC1-209ENST00000430407 RIMBP3Q9UFD9 1639 aa31.71■■■□□ 2.67
RCC1-209ENST00000430407 POLA1P09884 1462 aaPredicted RBP31.71■■■□□ 2.67
RCC1-209ENST00000430407 FBLN2P98095 1184 aa31.69■■■□□ 2.66
RCC1-209ENST00000430407 TARBP1Q13395 1621 aaKnown RBP31.68■■■□□ 2.66
RCC1-209ENST00000430407 ARHGEF11O15085 1522 aa31.66■■■□□ 2.66
RCC1-209ENST00000430407 SOGA1O94964 1423 aa31.63■■■□□ 2.65
RCC1-209ENST00000430407 RAD54L2Q9Y4B4 1467 aa31.59■■■□□ 2.65
RCC1-209ENST00000430407 TDRD9Q8NDG6 1382 aaKnown RBP31.57■■■□□ 2.64
RCC1-209ENST00000430407 CYB5RLQ6IPT4 315 aa31.54■■■□□ 2.64
RCC1-209ENST00000430407 CHD1O14646 1710 aa31.52■■■□□ 2.64
RCC1-209ENST00000430407 FGD5Q6ZNL6 1462 aa31.51■■■□□ 2.63
RCC1-209ENST00000430407 CHMP7Q8WUX9 453 aaPredicted RBP31.43■■■□□ 2.62
RCC1-209ENST00000430407 CUX1P39880 1505 aa31.42■■■□□ 2.62
RCC1-209ENST00000430407 WDR97A6NE52 1622 aa31.42■■■□□ 2.62
RCC1-209ENST00000430407 SNAPC4Q5SXM2 1469 aa31.4■■■□□ 2.62
RCC1-209ENST00000430407 GRIN2BQ13224 1484 aa31.34■■■□□ 2.61
RCC1-209ENST00000430407 MAGI1Q96QZ7 1491 aaPredicted RBP31.33■■■□□ 2.61
RCC1-209ENST00000430407 ARAP1Q96P48 1450 aa31.32■■■□□ 2.6
RCC1-209ENST00000430407 TRHP20396 242 aaPredicted RBP31.29■■■□□ 2.6
RCC1-209ENST00000430407 SYNJ1O43426 1573 aa31.26■■■□□ 2.59
RCC1-209ENST00000430407 SYNJ2O15056 1496 aa31.24■■■□□ 2.59
RCC1-209ENST00000430407 GAPVD1Q14C86 1478 aa31.21■■■□□ 2.59
RCC1-209ENST00000430407 CLASP1Q7Z460 1538 aa31.19■■■□□ 2.58
RCC1-209ENST00000430407 ABCA10Q8WWZ4 1543 aa31.14■■■□□ 2.57
RCC1-209ENST00000430407 PBRM1Q86U86 1689 aa31.09■■■□□ 2.57
RCC1-209ENST00000430407 WRNQ14191 1432 aaPredicted RBP eCLIP31.08■■■□□ 2.57
RCC1-209ENST00000430407 ABCA5Q8WWZ7 1642 aa31.02■■■□□ 2.56
RCC1-209ENST00000430407 TOP2BQ02880 1626 aa30.91■■■□□ 2.54
RCC1-209ENST00000430407 GRIN2AQ12879 1464 aa30.91■■■□□ 2.54
RCC1-209ENST00000430407 BIVM-ERCC5R4GMW8 1640 aa30.87■■■□□ 2.53
RCC1-209ENST00000430407 FHAD1B1AJZ9 1412 aa30.83■■■□□ 2.53
RCC1-209ENST00000430407 ADAMTS12P58397 1594 aa30.83■■■□□ 2.53
RCC1-209ENST00000430407 NUP160Q12769 1436 aa30.79■■■□□ 2.52
RCC1-209ENST00000430407 ERICH3Q5RHP9 1530 aa30.76■■■□□ 2.51
RCC1-209ENST00000430407 CEP170Q5SW79 1584 aa30.75■■■□□ 2.51
RCC1-209ENST00000430407 ERCC6L2Q5T890 1561 aa30.68■■■□□ 2.5
RCC1-209ENST00000430407 SHROOM2Q13796 1616 aa30.59■■■□□ 2.49
RCC1-209ENST00000430407 PRG4Q92954 1404 aaPredicted RBP30.57■■■□□ 2.48
RCC1-209ENST00000430407 JPH4Q96JJ6 628 aa30.57■■■□□ 2.48
RCC1-209ENST00000430407 AEBP2Q6ZN18 517 aaPredicted RBP30.46■■■□□ 2.47
RCC1-209ENST00000430407 KIF27Q86VH2 1401 aa30.41■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms