RNA–Protein interactions for RNA: ENST00000505221.5

PDCD6-202, Transcript of programmed cell death 6, humanhuman

TSL 3 BASIC

Gene PDCD6, Length 672 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-202ENST00000505221 NISCHQ9Y2I1 1504 aa37.26■■■■□ 3.56
PDCD6-202ENST00000505221 CCDC180Q9P1Z9 1646 aa32.81■■■□□ 2.84
PDCD6-202ENST00000505221 ABCC9O60706 1549 aa31.75■■■□□ 2.67
PDCD6-202ENST00000505221 DCAF8L2P0C7V8 631 aa31.2■■■□□ 2.59
PDCD6-202ENST00000505221 ZCCHC6Q5VYS8 1495 aaKnown RBP31.11■■■□□ 2.57
PDCD6-202ENST00000505221 DCAF1Q9Y4B6 1507 aa30.83■■■□□ 2.53
PDCD6-202ENST00000505221 NACADO15069 1562 aa30.83■■■□□ 2.53
PDCD6-202ENST00000505221 MYO15BQ96JP2 1530 aa30.78■■■□□ 2.52
PDCD6-202ENST00000505221 RB1CC1Q8TDY2 1594 aa30.74■■■□□ 2.51
PDCD6-202ENST00000505221 SCRIBQ14160 1630 aa30.04■■■□□ 2.4
PDCD6-202ENST00000505221 SHROOM4Q9ULL8 1493 aa29.87■■■□□ 2.37
PDCD6-202ENST00000505221 UNC13AQ9UPW8 1703 aa29.86■■■□□ 2.37
PDCD6-202ENST00000505221 PABPN1Q86U42 306 aaKnown RBP eCLIP29.85■■■□□ 2.37
PDCD6-202ENST00000505221 BICRAQ9NZM4 1560 aa29.69■■■□□ 2.34
PDCD6-202ENST00000505221 CECR2Q9BXF3 1484 aa28.97■■■□□ 2.23
PDCD6-202ENST00000505221 EIF4G1Q04637 1599 aaKnown RBP28.92■■■□□ 2.22
PDCD6-202ENST00000505221 BAZ1AQ9NRL2 1556 aaPredicted RBP28.86■■■□□ 2.21
PDCD6-202ENST00000505221 SMARCA4P51532 1647 aa28.76■■■□□ 2.2
PDCD6-202ENST00000505221 MROH2BQ7Z745 1585 aa28.71■■■□□ 2.19
PDCD6-202ENST00000505221 DNAJC5BQ9UF47 199 aa28.68■■■□□ 2.18
PDCD6-202ENST00000505221 CC2D2AQ9P2K1 1620 aa28.68■■■□□ 2.18
PDCD6-202ENST00000505221 RSF1Q96T23 1441 aaPredicted RBP28.62■■■□□ 2.17
PDCD6-202ENST00000505221 ATAD2BQ9ULI0 1458 aa28.54■■■□□ 2.16
PDCD6-202ENST00000505221 SMARCA2P51531 1590 aa28.54■■■□□ 2.16
PDCD6-202ENST00000505221 NCAPD3P42695 1498 aa28.46■■■□□ 2.15
PDCD6-202ENST00000505221 SUPT5HO00267 1087 aaKnown RBP28.45■■■□□ 2.14
PDCD6-202ENST00000505221 PEG3Q9GZU2 1588 aa28.45■■■□□ 2.14
PDCD6-202ENST00000505221 WIZO95785 1651 aa28.4■■■□□ 2.14
PDCD6-202ENST00000505221 BAZ1BQ9UIG0 1483 aaKnown RBP28.36■■■□□ 2.13
PDCD6-202ENST00000505221 HMGXB3Q12766 1538 aa28.3■■■□□ 2.12
PDCD6-202ENST00000505221 TOP2AP11388 1531 aaKnown RBP28.15■■■□□ 2.1
PDCD6-202ENST00000505221 CCDC88BA6NC98 1476 aa27.88■■■□□ 2.05
PDCD6-202ENST00000505221 CADPSQ9ULU8 1353 aa27.71■■■□□ 2.03
PDCD6-202ENST00000505221 LAMC3Q9Y6N6 1575 aa27.6■■■□□ 2.01
PDCD6-202ENST00000505221 CFTRP13569 1480 aa27.59■■■□□ 2.01
PDCD6-202ENST00000505221 NESP48681 1621 aa27.58■■■□□ 2.01
PDCD6-202ENST00000505221 PDS5BQ9NTI5 1447 aa27.5■■□□□ 1.99
PDCD6-202ENST00000505221 ERCC6Q03468 1493 aa27.39■■□□□ 1.98
PDCD6-202ENST00000505221 FANCD2Q9BXW9 1451 aa27.35■■□□□ 1.97
PDCD6-202ENST00000505221 CEP164Q9UPV0 1460 aa27.27■■□□□ 1.96
PDCD6-202ENST00000505221 PRDM2Q13029 1718 aa27.27■■□□□ 1.96
PDCD6-202ENST00000505221 KIF21AQ7Z4S6 1674 aa27.18■■□□□ 1.94
PDCD6-202ENST00000505221 MRC2Q9UBG0 1479 aa27.11■■□□□ 1.93
PDCD6-202ENST00000505221 ABCC8Q09428 1581 aa27.05■■□□□ 1.92
PDCD6-202ENST00000505221 WRNQ14191 1432 aaPredicted RBP eCLIP27.01■■□□□ 1.915e-6■■■■■ 33.4
PDCD6-202ENST00000505221 URB2Q14146 1524 aaKnown RBP26.99■■□□□ 1.91
PDCD6-202ENST00000505221 THOC2Q8NI27 1593 aaKnown RBP26.97■■□□□ 1.91
PDCD6-202ENST00000505221 WDR62O43379 1518 aa26.94■■□□□ 1.9
PDCD6-202ENST00000505221 TOPBP1Q92547 1522 aa26.94■■□□□ 1.9
PDCD6-202ENST00000505221 DNMBPQ6XZF7 1577 aa26.93■■□□□ 1.9
PDCD6-202ENST00000505221 CUX1P39880 1505 aa26.9■■□□□ 1.9
PDCD6-202ENST00000505221 TRIM41Q8WV44 630 aa26.87■■□□□ 1.89
PDCD6-202ENST00000505221 CUX2O14529 1486 aa26.84■■□□□ 1.89
PDCD6-202ENST00000505221 TOP2BQ02880 1626 aa26.8■■□□□ 1.88
PDCD6-202ENST00000505221 CHIC1Q5VXU3 224 aa26.8■■□□□ 1.88
PDCD6-202ENST00000505221 SYNJ1O43426 1573 aa26.8■■□□□ 1.88
PDCD6-202ENST00000505221 FGD5Q6ZNL6 1462 aa26.76■■□□□ 1.87
PDCD6-202ENST00000505221 BIVM-ERCC5R4GMW8 1640 aa26.75■■□□□ 1.87
PDCD6-202ENST00000505221 SOGA1O94964 1423 aa26.74■■□□□ 1.87
PDCD6-202ENST00000505221 POLA1P09884 1462 aaPredicted RBP26.74■■□□□ 1.87
PDCD6-202ENST00000505221 IFT140Q96RY7 1462 aa26.68■■□□□ 1.86
PDCD6-202ENST00000505221 RAD54L2Q9Y4B4 1467 aa26.65■■□□□ 1.86
PDCD6-202ENST00000505221 TARBP1Q13395 1621 aaKnown RBP26.54■■□□□ 1.84
PDCD6-202ENST00000505221 ABCA10Q8WWZ4 1543 aa26.53■■□□□ 1.84
PDCD6-202ENST00000505221 TDRD9Q8NDG6 1382 aaKnown RBP26.52■■□□□ 1.84
PDCD6-202ENST00000505221 ZNF608Q9ULD9 1512 aaPredicted RBP26.47■■□□□ 1.83
PDCD6-202ENST00000505221 AQRO60306 1485 aaKnown RBP eCLIP26.44■■□□□ 1.821e-6■■■■□ 25.2
PDCD6-202ENST00000505221 KIF27Q86VH2 1401 aa26.44■■□□□ 1.82
PDCD6-202ENST00000505221 GAPVD1Q14C86 1478 aa26.4■■□□□ 1.82
PDCD6-202ENST00000505221 WDR97A6NE52 1622 aa26.39■■□□□ 1.81
PDCD6-202ENST00000505221 EIF4G3O43432 1585 aaKnown RBP26.33■■□□□ 1.81
PDCD6-202ENST00000505221 GRIN2BQ13224 1484 aa26.32■■□□□ 1.8
PDCD6-202ENST00000505221 ABCA5Q8WWZ7 1642 aa26.29■■□□□ 1.8
PDCD6-202ENST00000505221 FAM9AQ8IZU1 332 aaPredicted RBP26.29■■□□□ 1.8
PDCD6-202ENST00000505221 EEA1Q15075 1411 aa26.28■■□□□ 1.8
PDCD6-202ENST00000505221 RUSC2Q8N2Y8 1516 aa26.26■■□□□ 1.79
PDCD6-202ENST00000505221 IGF1RP08069 1367 aa26.25■■□□□ 1.79
PDCD6-202ENST00000505221 CSRNP3Q8WYN3 585 aa26.23■■□□□ 1.79
PDCD6-202ENST00000505221 ERICH3Q5RHP9 1530 aa26.22■■□□□ 1.79
PDCD6-202ENST00000505221 SNAPC4Q5SXM2 1469 aa26.18■■□□□ 1.78
PDCD6-202ENST00000505221 FBLN2P98095 1184 aa26.18■■□□□ 1.78
PDCD6-202ENST00000505221 MAGI1Q96QZ7 1491 aaPredicted RBP26.17■■□□□ 1.78
PDCD6-202ENST00000505221 CHMP7Q8WUX9 453 aaPredicted RBP26.17■■□□□ 1.78
PDCD6-202ENST00000505221 PBRM1Q86U86 1689 aa26.17■■□□□ 1.78
PDCD6-202ENST00000505221 CARMIL1Q5VZK9 1371 aa26.14■■□□□ 1.78
PDCD6-202ENST00000505221 FHAD1B1AJZ9 1412 aa26.13■■□□□ 1.77
PDCD6-202ENST00000505221 SYNJ2O15056 1496 aa26.07■■□□□ 1.76
PDCD6-202ENST00000505221 CUL7Q14999 1698 aa26.05■■□□□ 1.76
PDCD6-202ENST00000505221 ADAMTS12P58397 1594 aa26.02■■□□□ 1.76
PDCD6-202ENST00000505221 RAPGEF2Q9Y4G8 1499 aa26■■□□□ 1.75
PDCD6-202ENST00000505221 OSCARQ8IYS5 282 aa25.98■■□□□ 1.75
PDCD6-202ENST00000505221 PRXQ9BXM0 1461 aa25.98■■□□□ 1.75
PDCD6-202ENST00000505221 GRIN2AQ12879 1464 aa25.95■■□□□ 1.74
PDCD6-202ENST00000505221 EHMT2Q96KQ7 1210 aa25.92■■□□□ 1.74
PDCD6-202ENST00000505221 CHD1O14646 1710 aa25.88■■□□□ 1.73
PDCD6-202ENST00000505221 UBTFP17480 764 aaKnown RBP25.87■■□□□ 1.73
PDCD6-202ENST00000505221 KIF21BO75037 1637 aa25.85■■□□□ 1.73
PDCD6-202ENST00000505221 GOLGA3Q08378 1498 aa25.82■■□□□ 1.72
PDCD6-202ENST00000505221 NUP160Q12769 1436 aa25.8■■□□□ 1.72
PDCD6-202ENST00000505221 CEP170Q5SW79 1584 aa25.73■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms