RNA–Protein interactions for RNA: ENST00000594198.1

EMP3-203, Transcript of epithelial membrane protein 3, humanhuman

TSL 2

Gene EMP3, Length 263 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EMP3-203ENST00000594198 NISCHQ9Y2I1 1504 aa24.51■■□□□ 1.51
EMP3-203ENST00000594198 ABCC9O60706 1549 aa23.94■■□□□ 1.42
EMP3-203ENST00000594198 DNAJC5BQ9UF47 199 aa23.85■■□□□ 1.41
EMP3-203ENST00000594198 DNAJC5Q9H3Z4 198 aa22.82■■□□□ 1.24
EMP3-203ENST00000594198 CCDC180Q9P1Z9 1646 aa22.39■■□□□ 1.18
EMP3-203ENST00000594198 PABPN1Q86U42 306 aaKnown RBP eCLIP22.19■■□□□ 1.14
EMP3-203ENST00000594198 RB1CC1Q8TDY2 1594 aa22.06■■□□□ 1.12
EMP3-203ENST00000594198 CECR2Q9BXF3 1484 aa21.69■■□□□ 1.06
EMP3-203ENST00000594198 NACADO15069 1562 aa21.61■■□□□ 1.05
EMP3-203ENST00000594198 BICRAQ9NZM4 1560 aa21.54■■□□□ 1.04
EMP3-203ENST00000594198 CC2D2AQ9P2K1 1620 aa21.47■■□□□ 1.03
EMP3-203ENST00000594198 UNC13AQ9UPW8 1703 aa21.44■■□□□ 1.02
EMP3-203ENST00000594198 DCAF8L2P0C7V8 631 aa21.44■■□□□ 1.02
EMP3-203ENST00000594198 TRIM41Q8WV44 630 aa21.23■□□□□ 0.99
EMP3-203ENST00000594198 CUX2O14529 1486 aa21.11■□□□□ 0.97
EMP3-203ENST00000594198 EIF4G1Q04637 1599 aaKnown RBP21.1■□□□□ 0.97
EMP3-203ENST00000594198 SHROOM4Q9ULL8 1493 aa21.01■□□□□ 0.95
EMP3-203ENST00000594198 MYO15BQ96JP2 1530 aa20.87■□□□□ 0.93
EMP3-203ENST00000594198 ERCC6Q03468 1493 aa20.7■□□□□ 0.9
EMP3-203ENST00000594198 SCRIBQ14160 1630 aa20.5■□□□□ 0.87
EMP3-203ENST00000594198 AEBP2Q6ZN18 517 aaPredicted RBP20.29■□□□□ 0.84
EMP3-203ENST00000594198 NESP48681 1621 aa20.2■□□□□ 0.82
EMP3-203ENST00000594198 THOC2Q8NI27 1593 aaKnown RBP20.12■□□□□ 0.81
EMP3-203ENST00000594198 DCAF1Q9Y4B6 1507 aa20.11■□□□□ 0.81
EMP3-203ENST00000594198 NCAPD3P42695 1498 aa20.07■□□□□ 0.8
EMP3-203ENST00000594198 OSCARQ8IYS5 282 aa20.07■□□□□ 0.8
EMP3-203ENST00000594198 ZCCHC6Q5VYS8 1495 aaKnown RBP19.99■□□□□ 0.79
EMP3-203ENST00000594198 TRHP20396 242 aaPredicted RBP19.9■□□□□ 0.78
EMP3-203ENST00000594198 SMARCA2P51531 1590 aa19.9■□□□□ 0.78
EMP3-203ENST00000594198 BAZ1AQ9NRL2 1556 aaPredicted RBP19.85■□□□□ 0.77
EMP3-203ENST00000594198 ATAD2BQ9ULI0 1458 aa19.81■□□□□ 0.76
EMP3-203ENST00000594198 RIMBP3CA6NJZ7 1639 aa19.79■□□□□ 0.76
EMP3-203ENST00000594198 RIMBP3BA6NNM3 1639 aa19.79■□□□□ 0.76
EMP3-203ENST00000594198 RIMBP3Q9UFD9 1639 aa19.79■□□□□ 0.76
EMP3-203ENST00000594198 ILDR1Q86SU0 546 aaPredicted RBP19.76■□□□□ 0.75
EMP3-203ENST00000594198 PDS5BQ9NTI5 1447 aa19.73■□□□□ 0.75
EMP3-203ENST00000594198 CYB5RLQ6IPT4 315 aa19.72■□□□□ 0.75
EMP3-203ENST00000594198 LAMC3Q9Y6N6 1575 aa19.7■□□□□ 0.74
EMP3-203ENST00000594198 KIF21AQ7Z4S6 1674 aa19.7■□□□□ 0.74
EMP3-203ENST00000594198 HMGXB3Q12766 1538 aa19.67■□□□□ 0.74
EMP3-203ENST00000594198 ARHGEF11O15085 1522 aa19.64■□□□□ 0.73
EMP3-203ENST00000594198 MRC2Q9UBG0 1479 aa19.6■□□□□ 0.73
EMP3-203ENST00000594198 WDR62O43379 1518 aa19.58■□□□□ 0.73
EMP3-203ENST00000594198 BAZ1BQ9UIG0 1483 aaKnown RBP19.48■□□□□ 0.71
EMP3-203ENST00000594198 CADPSQ9ULU8 1353 aa19.42■□□□□ 0.7
EMP3-203ENST00000594198 ARAP1Q96P48 1450 aa19.37■□□□□ 0.69
EMP3-203ENST00000594198 SMARCA4P51532 1647 aa19.33■□□□□ 0.69
EMP3-203ENST00000594198 CEP164Q9UPV0 1460 aa19.24■□□□□ 0.67
EMP3-203ENST00000594198 PEG3Q9GZU2 1588 aa19.17■□□□□ 0.66
EMP3-203ENST00000594198 FANCD2Q9BXW9 1451 aa19.15■□□□□ 0.66
EMP3-203ENST00000594198 ZNF608Q9ULD9 1512 aaPredicted RBP19.1■□□□□ 0.65
EMP3-203ENST00000594198 RSF1Q96T23 1441 aaPredicted RBP19.08■□□□□ 0.65
EMP3-203ENST00000594198 URB2Q14146 1524 aaKnown RBP19.08■□□□□ 0.64
EMP3-203ENST00000594198 KDM4FA0A1W2PPD8 638 aa18.97■□□□□ 0.63
EMP3-203ENST00000594198 FBLN2P98095 1184 aa18.96■□□□□ 0.63
EMP3-203ENST00000594198 IFT140Q96RY7 1462 aa18.93■□□□□ 0.62
EMP3-203ENST00000594198 MROH2BQ7Z745 1585 aa18.9■□□□□ 0.62
EMP3-203ENST00000594198 CFTRP13569 1480 aa18.87■□□□□ 0.61
EMP3-203ENST00000594198 CHD1O14646 1710 aa18.84■□□□□ 0.61
EMP3-203ENST00000594198 AQRO60306 1485 aaKnown RBP eCLIP18.79■□□□□ 0.62e-7■■■■□ 23.4
EMP3-203ENST00000594198 EIF4G3O43432 1585 aaKnown RBP18.78■□□□□ 0.6
EMP3-203ENST00000594198 FBXO41Q8TF61 875 aa18.71■□□□□ 0.59
EMP3-203ENST00000594198 CLASP1Q7Z460 1538 aa18.7■□□□□ 0.58
EMP3-203ENST00000594198 GAPVD1Q14C86 1478 aa18.67■□□□□ 0.58
EMP3-203ENST00000594198 TOPBP1Q92547 1522 aa18.62■□□□□ 0.57
EMP3-203ENST00000594198 LMTK3Q96Q04 1460 aa18.58■□□□□ 0.57
EMP3-203ENST00000594198 CHMP7Q8WUX9 453 aaPredicted RBP18.58■□□□□ 0.56
EMP3-203ENST00000594198 SOCS7O14512 581 aa18.55■□□□□ 0.56
EMP3-203ENST00000594198 ERCC6L2Q5T890 1561 aa18.55■□□□□ 0.56
EMP3-203ENST00000594198 WIZO95785 1651 aa18.54■□□□□ 0.56
EMP3-203ENST00000594198 TARBP1Q13395 1621 aaKnown RBP18.52■□□□□ 0.55
EMP3-203ENST00000594198 SYNJ1O43426 1573 aa18.51■□□□□ 0.55
EMP3-203ENST00000594198 HECW2Q9P2P5 1572 aa18.5■□□□□ 0.55
EMP3-203ENST00000594198 TDRD9Q8NDG6 1382 aaKnown RBP18.48■□□□□ 0.55
EMP3-203ENST00000594198 ILDR2Q71H61 639 aa18.48■□□□□ 0.55
EMP3-203ENST00000594198 SNAPC4Q5SXM2 1469 aa18.46■□□□□ 0.55
EMP3-203ENST00000594198 KIF13AQ9H1H9 1805 aa18.45■□□□□ 0.54
EMP3-203ENST00000594198 FAM69CQ0P6D2 419 aa18.45■□□□□ 0.54
EMP3-203ENST00000594198 ABCC8Q09428 1581 aa18.45■□□□□ 0.54
EMP3-203ENST00000594198 RAD54L2Q9Y4B4 1467 aa18.37■□□□□ 0.53
EMP3-203ENST00000594198 SYNJ2O15056 1496 aa18.36■□□□□ 0.53
EMP3-203ENST00000594198 DNMBPQ6XZF7 1577 aa18.36■□□□□ 0.53
EMP3-203ENST00000594198 ADGRL1O94910 1474 aa18.35■□□□□ 0.53
EMP3-203ENST00000594198 POLA1P09884 1462 aaPredicted RBP18.35■□□□□ 0.53
EMP3-203ENST00000594198 KDM6BO15054 1643 aa18.33■□□□□ 0.52
EMP3-203ENST00000594198 ABCC10Q5T3U5 1492 aa18.33■□□□□ 0.52
EMP3-203ENST00000594198 MAGI1Q96QZ7 1491 aaPredicted RBP18.33■□□□□ 0.52
EMP3-203ENST00000594198 SOGA1O94964 1423 aa18.3■□□□□ 0.52
EMP3-203ENST00000594198 PRDM2Q13029 1718 aa18.26■□□□□ 0.51
EMP3-203ENST00000594198 GRIN2BQ13224 1484 aa18.23■□□□□ 0.51
EMP3-203ENST00000594198 DISP3Q9P2K9 1392 aa18.23■□□□□ 0.51
EMP3-203ENST00000594198 TOP2AP11388 1531 aaKnown RBP18.19■□□□□ 0.5
EMP3-203ENST00000594198 CEP170Q5SW79 1584 aa18.16■□□□□ 0.5
EMP3-203ENST00000594198 DIP2BQ9P265 1576 aa18.14■□□□□ 0.49
EMP3-203ENST00000594198 NPM1P06748 294 aaKnown RBP eCLIP18.14■□□□□ 0.49
EMP3-203ENST00000594198 WDR97A6NE52 1622 aa18.12■□□□□ 0.49
EMP3-203ENST00000594198 CCDC88BA6NC98 1476 aa18.11■□□□□ 0.49
EMP3-203ENST00000594198 MAPKBP1O60336 1514 aa18.08■□□□□ 0.49
EMP3-203ENST00000594198 FGD5Q6ZNL6 1462 aa18.03■□□□□ 0.48
EMP3-203ENST00000594198 TSPOAP1O95153 1857 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms