RNA–Protein interactions for RNA: ENST00000547281.5

CDK4-204, Transcript of cyclin dependent kinase 4, humanhuman

TSL 3

Gene CDK4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-204ENST00000547281 NISCHQ9Y2I1 1504 aa39.87■■■■□ 3.97
CDK4-204ENST00000547281 CCDC180Q9P1Z9 1646 aa35.57■■■■□ 3.28
CDK4-204ENST00000547281 ABCC9O60706 1549 aa35.55■■■■□ 3.28
CDK4-204ENST00000547281 DCAF8L2P0C7V8 631 aa33.87■■■■□ 3.01
CDK4-204ENST00000547281 RB1CC1Q8TDY2 1594 aa33.86■■■■□ 3.01
CDK4-204ENST00000547281 NACADO15069 1562 aa33.67■■■□□ 2.98
CDK4-204ENST00000547281 PABPN1Q86U42 306 aaKnown RBP eCLIP33.24■■■□□ 2.91
CDK4-204ENST00000547281 MYO15BQ96JP2 1530 aa33.23■■■□□ 2.91
CDK4-204ENST00000547281 DNAJC5BQ9UF47 199 aa33.2■■■□□ 2.91
CDK4-204ENST00000547281 ZCCHC6Q5VYS8 1495 aaKnown RBP33.05■■■□□ 2.88
CDK4-204ENST00000547281 UNC13AQ9UPW8 1703 aa32.95■■■□□ 2.87
CDK4-204ENST00000547281 DCAF1Q9Y4B6 1507 aa32.89■■■□□ 2.86
CDK4-204ENST00000547281 BICRAQ9NZM4 1560 aa32.79■■■□□ 2.84
CDK4-204ENST00000547281 SCRIBQ14160 1630 aa32.53■■■□□ 2.8
CDK4-204ENST00000547281 SHROOM4Q9ULL8 1493 aa32.38■■■□□ 2.77
CDK4-204ENST00000547281 CC2D2AQ9P2K1 1620 aa32.04■■■□□ 2.72
CDK4-204ENST00000547281 EIF4G1Q04637 1599 aaKnown RBP32.02■■■□□ 2.72
CDK4-204ENST00000547281 CECR2Q9BXF3 1484 aa31.99■■■□□ 2.71
CDK4-204ENST00000547281 NCAPD3P42695 1498 aa31.12■■■□□ 2.57
CDK4-204ENST00000547281 ATAD2BQ9ULI0 1458 aa31.05■■■□□ 2.56
CDK4-204ENST00000547281 SMARCA4P51532 1647 aa31.01■■■□□ 2.55
CDK4-204ENST00000547281 SMARCA2P51531 1590 aa30.96■■■□□ 2.55
CDK4-204ENST00000547281 BAZ1AQ9NRL2 1556 aaPredicted RBP30.93■■■□□ 2.54
CDK4-204ENST00000547281 HMGXB3Q12766 1538 aa30.83■■■□□ 2.53
CDK4-204ENST00000547281 BAZ1BQ9UIG0 1483 aaKnown RBP30.79■■■□□ 2.52
CDK4-204ENST00000547281 MROH2BQ7Z745 1585 aa30.73■■■□□ 2.51
CDK4-204ENST00000547281 ERCC6Q03468 1493 aa30.71■■■□□ 2.51
CDK4-204ENST00000547281 PEG3Q9GZU2 1588 aa30.67■■■□□ 2.5
CDK4-204ENST00000547281 NESP48681 1621 aa30.57■■■□□ 2.48
CDK4-204ENST00000547281 CUX2O14529 1486 aa30.49■■■□□ 2.47
CDK4-204ENST00000547281 DNAJC5Q9H3Z4 198 aa30.35■■■□□ 2.45
CDK4-204ENST00000547281 WIZO95785 1651 aa30.35■■■□□ 2.45
CDK4-204ENST00000547281 LAMC3Q9Y6N6 1575 aa30.34■■■□□ 2.45
CDK4-204ENST00000547281 PDS5BQ9NTI5 1447 aa30.27■■■□□ 2.44
CDK4-204ENST00000547281 CADPSQ9ULU8 1353 aa30.24■■■□□ 2.43
CDK4-204ENST00000547281 RSF1Q96T23 1441 aaPredicted RBP30.22■■■□□ 2.43
CDK4-204ENST00000547281 THOC2Q8NI27 1593 aaKnown RBP30.09■■■□□ 2.41
CDK4-204ENST00000547281 KIF21AQ7Z4S6 1674 aa30.07■■■□□ 2.41
CDK4-204ENST00000547281 TOP2AP11388 1531 aaKnown RBP29.97■■■□□ 2.39
CDK4-204ENST00000547281 MRC2Q9UBG0 1479 aa29.93■■■□□ 2.38
CDK4-204ENST00000547281 CFTRP13569 1480 aa29.87■■■□□ 2.37
CDK4-204ENST00000547281 FANCD2Q9BXW9 1451 aa29.87■■■□□ 2.37
CDK4-204ENST00000547281 CEP164Q9UPV0 1460 aa29.87■■■□□ 2.37
CDK4-204ENST00000547281 WDR62O43379 1518 aa29.78■■■□□ 2.36
CDK4-204ENST00000547281 CCDC88BA6NC98 1476 aa29.71■■■□□ 2.35
CDK4-204ENST00000547281 URB2Q14146 1524 aaKnown RBP29.56■■■□□ 2.32
CDK4-204ENST00000547281 PRDM2Q13029 1718 aa29.43■■■□□ 2.3
CDK4-204ENST00000547281 OSCARQ8IYS5 282 aa29.31■■■□□ 2.28
CDK4-204ENST00000547281 TOPBP1Q92547 1522 aa29.3■■■□□ 2.28
CDK4-204ENST00000547281 ABCC8Q09428 1581 aa29.28■■■□□ 2.28
CDK4-204ENST00000547281 IFT140Q96RY7 1462 aa29.26■■■□□ 2.27
CDK4-204ENST00000547281 SUPT5HO00267 1087 aaKnown RBP29.24■■■□□ 2.27
CDK4-204ENST00000547281 TRIM41Q8WV44 630 aa29.2■■■□□ 2.26
CDK4-204ENST00000547281 ZNF608Q9ULD9 1512 aaPredicted RBP29.19■■■□□ 2.26
CDK4-204ENST00000547281 DNMBPQ6XZF7 1577 aa29.17■■■□□ 2.26
CDK4-204ENST00000547281 AQRO60306 1485 aaKnown RBP eCLIP29.01■■■□□ 2.239e-10■■■■■ 41.2
CDK4-204ENST00000547281 POLA1P09884 1462 aaPredicted RBP29■■■□□ 2.23
CDK4-204ENST00000547281 SOGA1O94964 1423 aa28.97■■■□□ 2.23
CDK4-204ENST00000547281 EIF4G3O43432 1585 aaKnown RBP28.96■■■□□ 2.23
CDK4-204ENST00000547281 TARBP1Q13395 1621 aaKnown RBP28.95■■■□□ 2.23
CDK4-204ENST00000547281 RAD54L2Q9Y4B4 1467 aa28.94■■■□□ 2.22
CDK4-204ENST00000547281 FBLN2P98095 1184 aa28.92■■■□□ 2.22
CDK4-204ENST00000547281 TDRD9Q8NDG6 1382 aaKnown RBP28.9■■■□□ 2.22
CDK4-204ENST00000547281 FGD5Q6ZNL6 1462 aa28.87■■■□□ 2.21
CDK4-204ENST00000547281 CUX1P39880 1505 aa28.85■■■□□ 2.21
CDK4-204ENST00000547281 CHMP7Q8WUX9 453 aaPredicted RBP28.71■■■□□ 2.19
CDK4-204ENST00000547281 RIMBP3CA6NJZ7 1639 aa28.7■■■□□ 2.19
CDK4-204ENST00000547281 RIMBP3BA6NNM3 1639 aa28.7■■■□□ 2.19
CDK4-204ENST00000547281 RIMBP3Q9UFD9 1639 aa28.7■■■□□ 2.19
CDK4-204ENST00000547281 CHD1O14646 1710 aa28.69■■■□□ 2.18
CDK4-204ENST00000547281 ARHGEF11O15085 1522 aa28.67■■■□□ 2.18
CDK4-204ENST00000547281 SNAPC4Q5SXM2 1469 aa28.66■■■□□ 2.18
CDK4-204ENST00000547281 WDR97A6NE52 1622 aa28.65■■■□□ 2.18
CDK4-204ENST00000547281 GRIN2BQ13224 1484 aa28.64■■■□□ 2.17
CDK4-204ENST00000547281 CYB5RLQ6IPT4 315 aa28.63■■■□□ 2.17
CDK4-204ENST00000547281 MAGI1Q96QZ7 1491 aaPredicted RBP28.59■■■□□ 2.17
CDK4-204ENST00000547281 GAPVD1Q14C86 1478 aa28.58■■■□□ 2.17
CDK4-204ENST00000547281 WRNQ14191 1432 aaPredicted RBP eCLIP28.55■■■□□ 2.16
CDK4-204ENST00000547281 ABCA10Q8WWZ4 1543 aa28.53■■■□□ 2.16
CDK4-204ENST00000547281 SYNJ2O15056 1496 aa28.5■■■□□ 2.15
CDK4-204ENST00000547281 SYNJ1O43426 1573 aa28.45■■■□□ 2.14
CDK4-204ENST00000547281 TOP2BQ02880 1626 aa28.42■■■□□ 2.14
CDK4-204ENST00000547281 PBRM1Q86U86 1689 aa28.42■■■□□ 2.14
CDK4-204ENST00000547281 ARAP1Q96P48 1450 aa28.4■■■□□ 2.14
CDK4-204ENST00000547281 ABCA5Q8WWZ7 1642 aa28.4■■■□□ 2.14
CDK4-204ENST00000547281 BIVM-ERCC5R4GMW8 1640 aa28.38■■■□□ 2.13
CDK4-204ENST00000547281 CLASP1Q7Z460 1538 aa28.38■■■□□ 2.13
CDK4-204ENST00000547281 TRHP20396 242 aaPredicted RBP28.29■■■□□ 2.12
CDK4-204ENST00000547281 GRIN2AQ12879 1464 aa28.24■■■□□ 2.11
CDK4-204ENST00000547281 FHAD1B1AJZ9 1412 aa28.23■■■□□ 2.11
CDK4-204ENST00000547281 ADAMTS12P58397 1594 aa28.19■■■□□ 2.1
CDK4-204ENST00000547281 ERICH3Q5RHP9 1530 aa28.18■■■□□ 2.1
CDK4-204ENST00000547281 NUP160Q12769 1436 aa28.12■■■□□ 2.09
CDK4-204ENST00000547281 CEP170Q5SW79 1584 aa28.08■■■□□ 2.09
CDK4-204ENST00000547281 JPH4Q96JJ6 628 aa28■■■□□ 2.07
CDK4-204ENST00000547281 KIF27Q86VH2 1401 aa28■■■□□ 2.07
CDK4-204ENST00000547281 ERCC6L2Q5T890 1561 aa27.99■■■□□ 2.07
CDK4-204ENST00000547281 IGF1RP08069 1367 aa27.97■■■□□ 2.07
CDK4-204ENST00000547281 PRG4Q92954 1404 aaPredicted RBP27.92■■■□□ 2.06
CDK4-204ENST00000547281 SHROOM2Q13796 1616 aa27.89■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms