RNA–Protein interactions for RNA: ENST00000462970.5

PSMD4-208, Transcript of proteasome 26S subunit, non-ATPase 4, humanhuman

TSL 5

Gene PSMD4, Length 900 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4-208ENST00000462970 NISCHQ9Y2I1 1504 aa23.16■■□□□ 1.3
PSMD4-208ENST00000462970 CCDC180Q9P1Z9 1646 aa20.61■□□□□ 0.89
PSMD4-208ENST00000462970 ABCC9O60706 1549 aa20.22■□□□□ 0.83
PSMD4-208ENST00000462970 DCAF8L2P0C7V8 631 aa19.52■□□□□ 0.72
PSMD4-208ENST00000462970 RB1CC1Q8TDY2 1594 aa19.41■□□□□ 0.7
PSMD4-208ENST00000462970 NACADO15069 1562 aa19.35■□□□□ 0.69
PSMD4-208ENST00000462970 ZCCHC6Q5VYS8 1495 aaKnown RBP19.28■□□□□ 0.68
PSMD4-208ENST00000462970 MYO15BQ96JP2 1530 aa19.15■□□□□ 0.66
PSMD4-208ENST00000462970 DCAF1Q9Y4B6 1507 aa19.1■□□□□ 0.65
PSMD4-208ENST00000462970 UNC13AQ9UPW8 1703 aa19.03■□□□□ 0.64
PSMD4-208ENST00000462970 DNAJC5BQ9UF47 199 aa18.99■□□□□ 0.63
PSMD4-208ENST00000462970 PABPN1Q86U42 306 aaKnown RBP eCLIP18.91■□□□□ 0.62
PSMD4-208ENST00000462970 SCRIBQ14160 1630 aa18.89■□□□□ 0.62
PSMD4-208ENST00000462970 BICRAQ9NZM4 1560 aa18.79■□□□□ 0.6
PSMD4-208ENST00000462970 SHROOM4Q9ULL8 1493 aa18.52■□□□□ 0.56
PSMD4-208ENST00000462970 EIF4G1Q04637 1599 aaKnown RBP18.31■□□□□ 0.52
PSMD4-208ENST00000462970 CC2D2AQ9P2K1 1620 aa18.27■□□□□ 0.51
PSMD4-208ENST00000462970 CECR2Q9BXF3 1484 aa18.15■□□□□ 0.5
PSMD4-208ENST00000462970 CHIC1Q5VXU3 224 aa18.15■□□□□ 0.5
PSMD4-208ENST00000462970 AEBP2Q6ZN18 517 aaPredicted RBP18.15■□□□□ 0.5
PSMD4-208ENST00000462970 SMARCA4P51532 1647 aa18.01■□□□□ 0.47
PSMD4-208ENST00000462970 BAZ1AQ9NRL2 1556 aaPredicted RBP17.97■□□□□ 0.47
PSMD4-208ENST00000462970 MROH2BQ7Z745 1585 aa17.88■□□□□ 0.45
PSMD4-208ENST00000462970 ATAD2BQ9ULI0 1458 aa17.87■□□□□ 0.45
PSMD4-208ENST00000462970 SMARCA2P51531 1590 aa17.87■□□□□ 0.45
PSMD4-208ENST00000462970 NCAPD3P42695 1498 aa17.82■□□□□ 0.44
PSMD4-208ENST00000462970 BAZ1BQ9UIG0 1483 aaKnown RBP17.77■□□□□ 0.44
PSMD4-208ENST00000462970 HMGXB3Q12766 1538 aa17.76■□□□□ 0.43
PSMD4-208ENST00000462970 PEG3Q9GZU2 1588 aa17.74■□□□□ 0.43
PSMD4-208ENST00000462970 WIZO95785 1651 aa17.74■□□□□ 0.43
PSMD4-208ENST00000462970 RSF1Q96T23 1441 aaPredicted RBP17.65■□□□□ 0.42
PSMD4-208ENST00000462970 TOP2AP11388 1531 aaKnown RBP17.5■□□□□ 0.39
PSMD4-208ENST00000462970 NESP48681 1621 aa17.49■□□□□ 0.39
PSMD4-208ENST00000462970 ERCC6Q03468 1493 aa17.44■□□□□ 0.38
PSMD4-208ENST00000462970 LAMC3Q9Y6N6 1575 aa17.4■□□□□ 0.38
PSMD4-208ENST00000462970 SUPT5HO00267 1087 aaKnown RBP17.36■□□□□ 0.37
PSMD4-208ENST00000462970 CADPSQ9ULU8 1353 aa17.33■□□□□ 0.36
PSMD4-208ENST00000462970 DNAJC5Q9H3Z4 198 aa17.32■□□□□ 0.36
PSMD4-208ENST00000462970 KIF21AQ7Z4S6 1674 aa17.32■□□□□ 0.36
PSMD4-208ENST00000462970 CCDC88BA6NC98 1476 aa17.3■□□□□ 0.36
PSMD4-208ENST00000462970 PDS5BQ9NTI5 1447 aa17.29■□□□□ 0.36
PSMD4-208ENST00000462970 CUX2O14529 1486 aa17.27■□□□□ 0.36
PSMD4-208ENST00000462970 CFTRP13569 1480 aa17.21■□□□□ 0.35
PSMD4-208ENST00000462970 PRDM2Q13029 1718 aa17.19■□□□□ 0.34
PSMD4-208ENST00000462970 THOC2Q8NI27 1593 aaKnown RBP17.19■□□□□ 0.34
PSMD4-208ENST00000462970 FANCD2Q9BXW9 1451 aa17.18■□□□□ 0.34
PSMD4-208ENST00000462970 CEP164Q9UPV0 1460 aa17.16■□□□□ 0.34
PSMD4-208ENST00000462970 MRC2Q9UBG0 1479 aa17.12■□□□□ 0.33
PSMD4-208ENST00000462970 WDR62O43379 1518 aa17.03■□□□□ 0.32
PSMD4-208ENST00000462970 URB2Q14146 1524 aaKnown RBP17■□□□□ 0.31
PSMD4-208ENST00000462970 TOPBP1Q92547 1522 aa16.9■□□□□ 0.3
PSMD4-208ENST00000462970 DNMBPQ6XZF7 1577 aa16.89■□□□□ 0.29
PSMD4-208ENST00000462970 ABCC8Q09428 1581 aa16.86■□□□□ 0.29
PSMD4-208ENST00000462970 CUX1P39880 1505 aa16.78■□□□□ 0.28
PSMD4-208ENST00000462970 IFT140Q96RY7 1462 aa16.78■□□□□ 0.28
PSMD4-208ENST00000462970 POLA1P09884 1462 aaPredicted RBP16.74■□□□□ 0.27
PSMD4-208ENST00000462970 FGD5Q6ZNL6 1462 aa16.73■□□□□ 0.27
PSMD4-208ENST00000462970 ZNF608Q9ULD9 1512 aaPredicted RBP16.72■□□□□ 0.27
PSMD4-208ENST00000462970 RAD54L2Q9Y4B4 1467 aa16.71■□□□□ 0.27
PSMD4-208ENST00000462970 TARBP1Q13395 1621 aaKnown RBP16.7■□□□□ 0.26
PSMD4-208ENST00000462970 SOGA1O94964 1423 aa16.7■□□□□ 0.26
PSMD4-208ENST00000462970 TRIM41Q8WV44 630 aa16.68■□□□□ 0.26
PSMD4-208ENST00000462970 WRNQ14191 1432 aaPredicted RBP eCLIP16.68■□□□□ 0.26
PSMD4-208ENST00000462970 EIF4G3O43432 1585 aaKnown RBP16.68■□□□□ 0.26
PSMD4-208ENST00000462970 SYNJ1O43426 1573 aa16.65■□□□□ 0.26
PSMD4-208ENST00000462970 AQRO60306 1485 aaKnown RBP eCLIP16.64■□□□□ 0.253e-7■■■■□ 21.2
PSMD4-208ENST00000462970 BIVM-ERCC5R4GMW8 1640 aa16.63■□□□□ 0.25
PSMD4-208ENST00000462970 TOP2BQ02880 1626 aa16.63■□□□□ 0.25
PSMD4-208ENST00000462970 TDRD9Q8NDG6 1382 aaKnown RBP16.63■□□□□ 0.25
PSMD4-208ENST00000462970 OSCARQ8IYS5 282 aa16.59■□□□□ 0.25
PSMD4-208ENST00000462970 WDR97A6NE52 1622 aa16.58■□□□□ 0.24
PSMD4-208ENST00000462970 FBLN2P98095 1184 aa16.53■□□□□ 0.24
PSMD4-208ENST00000462970 ABCA10Q8WWZ4 1543 aa16.53■□□□□ 0.24
PSMD4-208ENST00000462970 PBRM1Q86U86 1689 aa16.52■□□□□ 0.23
PSMD4-208ENST00000462970 CHD1O14646 1710 aa16.51■□□□□ 0.23
PSMD4-208ENST00000462970 GAPVD1Q14C86 1478 aa16.5■□□□□ 0.23
PSMD4-208ENST00000462970 GRIN2BQ13224 1484 aa16.49■□□□□ 0.23
PSMD4-208ENST00000462970 SNAPC4Q5SXM2 1469 aa16.49■□□□□ 0.23
PSMD4-208ENST00000462970 ABCA5Q8WWZ7 1642 aa16.48■□□□□ 0.23
PSMD4-208ENST00000462970 MAGI1Q96QZ7 1491 aaPredicted RBP16.43■□□□□ 0.22
PSMD4-208ENST00000462970 CHMP7Q8WUX9 453 aaPredicted RBP16.42■□□□□ 0.22
PSMD4-208ENST00000462970 SYNJ2O15056 1496 aa16.37■□□□□ 0.21
PSMD4-208ENST00000462970 ADAMTS12P58397 1594 aa16.34■□□□□ 0.21
PSMD4-208ENST00000462970 KIF27Q86VH2 1401 aa16.33■□□□□ 0.2
PSMD4-208ENST00000462970 ERICH3Q5RHP9 1530 aa16.33■□□□□ 0.2
PSMD4-208ENST00000462970 RIMBP3CA6NJZ7 1639 aa16.3■□□□□ 0.2
PSMD4-208ENST00000462970 RIMBP3BA6NNM3 1639 aa16.3■□□□□ 0.2
PSMD4-208ENST00000462970 RIMBP3Q9UFD9 1639 aa16.3■□□□□ 0.2
PSMD4-208ENST00000462970 FHAD1B1AJZ9 1412 aa16.29■□□□□ 0.2
PSMD4-208ENST00000462970 ARHGEF11O15085 1522 aa16.28■□□□□ 0.2
PSMD4-208ENST00000462970 GRIN2AQ12879 1464 aa16.28■□□□□ 0.2
PSMD4-208ENST00000462970 CYB5RLQ6IPT4 315 aa16.27■□□□□ 0.2
PSMD4-208ENST00000462970 CLASP1Q7Z460 1538 aa16.24■□□□□ 0.19
PSMD4-208ENST00000462970 CUL7Q14999 1698 aa16.24■□□□□ 0.19
PSMD4-208ENST00000462970 IGF1RP08069 1367 aa16.23■□□□□ 0.19
PSMD4-208ENST00000462970 CEP170Q5SW79 1584 aa16.21■□□□□ 0.19
PSMD4-208ENST00000462970 RUSC2Q8N2Y8 1516 aa16.2■□□□□ 0.18
PSMD4-208ENST00000462970 CARMIL1Q5VZK9 1371 aa16.16■□□□□ 0.18
PSMD4-208ENST00000462970 NUP160Q12769 1436 aa16.16■□□□□ 0.18
PSMD4-208ENST00000462970 ARAP1Q96P48 1450 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 136.5 ms