RNA–Protein interactions for RNA: ENST00000550419.5

CDK4-207, Transcript of cyclin dependent kinase 4, humanhuman

TSL 3

Gene CDK4, Length 919 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-207ENST00000550419 NISCHQ9Y2I1 1504 aa42.27■■■■■ 4.36
CDK4-207ENST00000550419 CCDC180Q9P1Z9 1646 aa37.54■■■■□ 3.6
CDK4-207ENST00000550419 ABCC9O60706 1549 aa36.48■■■■□ 3.43
CDK4-207ENST00000550419 NACADO15069 1562 aa35.27■■■■□ 3.24
CDK4-207ENST00000550419 ZCCHC6Q5VYS8 1495 aaKnown RBP35.25■■■■□ 3.23
CDK4-207ENST00000550419 RB1CC1Q8TDY2 1594 aa35.25■■■■□ 3.23
CDK4-207ENST00000550419 MYO15BQ96JP2 1530 aa35.19■■■■□ 3.22
CDK4-207ENST00000550419 DCAF8L2P0C7V8 631 aa35.11■■■■□ 3.21
CDK4-207ENST00000550419 DCAF1Q9Y4B6 1507 aa35.06■■■■□ 3.2
CDK4-207ENST00000550419 UNC13AQ9UPW8 1703 aa34.36■■■■□ 3.09
CDK4-207ENST00000550419 BICRAQ9NZM4 1560 aa34.15■■■■□ 3.06
CDK4-207ENST00000550419 SCRIBQ14160 1630 aa34.15■■■■□ 3.06
CDK4-207ENST00000550419 PABPN1Q86U42 306 aaKnown RBP eCLIP34.09■■■■□ 3.05
CDK4-207ENST00000550419 SHROOM4Q9ULL8 1493 aa33.94■■■■□ 3.02
CDK4-207ENST00000550419 DNAJC5BQ9UF47 199 aa33.36■■■□□ 2.93
CDK4-207ENST00000550419 EIF4G1Q04637 1599 aaKnown RBP33.24■■■□□ 2.91
CDK4-207ENST00000550419 CC2D2AQ9P2K1 1620 aa33.04■■■□□ 2.88
CDK4-207ENST00000550419 CECR2Q9BXF3 1484 aa32.86■■■□□ 2.85
CDK4-207ENST00000550419 BAZ1AQ9NRL2 1556 aaPredicted RBP32.76■■■□□ 2.84
CDK4-207ENST00000550419 SMARCA4P51532 1647 aa32.74■■■□□ 2.83
CDK4-207ENST00000550419 NCAPD3P42695 1498 aa32.56■■■□□ 2.8
CDK4-207ENST00000550419 ATAD2BQ9ULI0 1458 aa32.54■■■□□ 2.8
CDK4-207ENST00000550419 SMARCA2P51531 1590 aa32.54■■■□□ 2.8
CDK4-207ENST00000550419 MROH2BQ7Z745 1585 aa32.53■■■□□ 2.8
CDK4-207ENST00000550419 PEG3Q9GZU2 1588 aa32.5■■■□□ 2.79
CDK4-207ENST00000550419 HMGXB3Q12766 1538 aa32.4■■■□□ 2.78
CDK4-207ENST00000550419 BAZ1BQ9UIG0 1483 aaKnown RBP32.27■■■□□ 2.76
CDK4-207ENST00000550419 RSF1Q96T23 1441 aaPredicted RBP32.25■■■□□ 2.75
CDK4-207ENST00000550419 WIZO95785 1651 aa32.16■■■□□ 2.74
CDK4-207ENST00000550419 TOP2AP11388 1531 aaKnown RBP31.9■■■□□ 2.7
CDK4-207ENST00000550419 LAMC3Q9Y6N6 1575 aa31.64■■■□□ 2.66
CDK4-207ENST00000550419 NESP48681 1621 aa31.61■■■□□ 2.65
CDK4-207ENST00000550419 CADPSQ9ULU8 1353 aa31.58■■■□□ 2.65
CDK4-207ENST00000550419 CCDC88BA6NC98 1476 aa31.5■■■□□ 2.63
CDK4-207ENST00000550419 ERCC6Q03468 1493 aa31.46■■■□□ 2.63
CDK4-207ENST00000550419 CFTRP13569 1480 aa31.44■■■□□ 2.62
CDK4-207ENST00000550419 PDS5BQ9NTI5 1447 aa31.43■■■□□ 2.62
CDK4-207ENST00000550419 SUPT5HO00267 1087 aaKnown RBP31.43■■■□□ 2.62
CDK4-207ENST00000550419 KIF21AQ7Z4S6 1674 aa31.24■■■□□ 2.59
CDK4-207ENST00000550419 FANCD2Q9BXW9 1451 aa31.19■■■□□ 2.58
CDK4-207ENST00000550419 PRDM2Q13029 1718 aa31.16■■■□□ 2.58
CDK4-207ENST00000550419 CUX2O14529 1486 aa31.15■■■□□ 2.58
CDK4-207ENST00000550419 THOC2Q8NI27 1593 aaKnown RBP31.15■■■□□ 2.58
CDK4-207ENST00000550419 CEP164Q9UPV0 1460 aa31.14■■■□□ 2.58
CDK4-207ENST00000550419 MRC2Q9UBG0 1479 aa31.08■■■□□ 2.57
CDK4-207ENST00000550419 WDR62O43379 1518 aa30.98■■■□□ 2.55
CDK4-207ENST00000550419 URB2Q14146 1524 aaKnown RBP30.86■■■□□ 2.53
CDK4-207ENST00000550419 ABCC8Q09428 1581 aa30.79■■■□□ 2.52
CDK4-207ENST00000550419 TOPBP1Q92547 1522 aa30.71■■■□□ 2.51
CDK4-207ENST00000550419 DNMBPQ6XZF7 1577 aa30.7■■■□□ 2.5
CDK4-207ENST00000550419 CUX1P39880 1505 aa30.52■■■□□ 2.48
CDK4-207ENST00000550419 IFT140Q96RY7 1462 aa30.5■■■□□ 2.47
CDK4-207ENST00000550419 POLA1P09884 1462 aaPredicted RBP30.46■■■□□ 2.47
CDK4-207ENST00000550419 WRNQ14191 1432 aaPredicted RBP eCLIP30.39■■■□□ 2.46
CDK4-207ENST00000550419 FGD5Q6ZNL6 1462 aa30.39■■■□□ 2.46
CDK4-207ENST00000550419 TARBP1Q13395 1621 aaKnown RBP30.38■■■□□ 2.45
CDK4-207ENST00000550419 DNAJC5Q9H3Z4 198 aa30.35■■■□□ 2.45
CDK4-207ENST00000550419 SOGA1O94964 1423 aa30.34■■■□□ 2.45
CDK4-207ENST00000550419 TOP2BQ02880 1626 aa30.33■■■□□ 2.45
CDK4-207ENST00000550419 BIVM-ERCC5R4GMW8 1640 aa30.32■■■□□ 2.44
CDK4-207ENST00000550419 ZNF608Q9ULD9 1512 aaPredicted RBP30.29■■■□□ 2.44
CDK4-207ENST00000550419 RAD54L2Q9Y4B4 1467 aa30.28■■■□□ 2.44
CDK4-207ENST00000550419 SYNJ1O43426 1573 aa30.28■■■□□ 2.44
CDK4-207ENST00000550419 WDR97A6NE52 1622 aa30.22■■■□□ 2.43
CDK4-207ENST00000550419 EIF4G3O43432 1585 aaKnown RBP30.2■■■□□ 2.42
CDK4-207ENST00000550419 ABCA10Q8WWZ4 1543 aa30.15■■■□□ 2.42
CDK4-207ENST00000550419 AQRO60306 1485 aaKnown RBP eCLIP30.14■■■□□ 2.429e-10■■■■■ 41.2
CDK4-207ENST00000550419 TDRD9Q8NDG6 1382 aaKnown RBP30.12■■■□□ 2.41
CDK4-207ENST00000550419 ABCA5Q8WWZ7 1642 aa30■■■□□ 2.39
CDK4-207ENST00000550419 GRIN2BQ13224 1484 aa29.99■■■□□ 2.39
CDK4-207ENST00000550419 GAPVD1Q14C86 1478 aa29.99■■■□□ 2.39
CDK4-207ENST00000550419 MAGI1Q96QZ7 1491 aaPredicted RBP29.91■■■□□ 2.38
CDK4-207ENST00000550419 SNAPC4Q5SXM2 1469 aa29.87■■■□□ 2.37
CDK4-207ENST00000550419 PBRM1Q86U86 1689 aa29.87■■■□□ 2.37
CDK4-207ENST00000550419 OSCARQ8IYS5 282 aa29.85■■■□□ 2.37
CDK4-207ENST00000550419 ERICH3Q5RHP9 1530 aa29.81■■■□□ 2.36
CDK4-207ENST00000550419 SYNJ2O15056 1496 aa29.78■■■□□ 2.36
CDK4-207ENST00000550419 KIF27Q86VH2 1401 aa29.77■■■□□ 2.36
CDK4-207ENST00000550419 CHD1O14646 1710 aa29.75■■■□□ 2.35
CDK4-207ENST00000550419 TRIM41Q8WV44 630 aa29.74■■■□□ 2.35
CDK4-207ENST00000550419 FBLN2P98095 1184 aa29.71■■■□□ 2.35
CDK4-207ENST00000550419 CHMP7Q8WUX9 453 aaPredicted RBP29.71■■■□□ 2.35
CDK4-207ENST00000550419 ADAMTS12P58397 1594 aa29.68■■■□□ 2.34
CDK4-207ENST00000550419 FHAD1B1AJZ9 1412 aa29.67■■■□□ 2.34
CDK4-207ENST00000550419 IGF1RP08069 1367 aa29.63■■■□□ 2.33
CDK4-207ENST00000550419 GRIN2AQ12879 1464 aa29.59■■■□□ 2.33
CDK4-207ENST00000550419 CUL7Q14999 1698 aa29.54■■■□□ 2.32
CDK4-207ENST00000550419 CLASP1Q7Z460 1538 aa29.5■■■□□ 2.31
CDK4-207ENST00000550419 NUP160Q12769 1436 aa29.48■■■□□ 2.31
CDK4-207ENST00000550419 CHIC1Q5VXU3 224 aa29.48■■■□□ 2.31
CDK4-207ENST00000550419 RUSC2Q8N2Y8 1516 aa29.46■■■□□ 2.31
CDK4-207ENST00000550419 CARMIL1Q5VZK9 1371 aa29.43■■■□□ 2.3
CDK4-207ENST00000550419 CEP170Q5SW79 1584 aa29.41■■■□□ 2.3
CDK4-207ENST00000550419 ARHGEF11O15085 1522 aa29.35■■■□□ 2.29
CDK4-207ENST00000550419 EEA1Q15075 1411 aa29.33■■■□□ 2.29
CDK4-207ENST00000550419 RIMBP3CA6NJZ7 1639 aa29.31■■■□□ 2.28
CDK4-207ENST00000550419 RIMBP3BA6NNM3 1639 aa29.31■■■□□ 2.28
CDK4-207ENST00000550419 RIMBP3Q9UFD9 1639 aa29.31■■■□□ 2.28
CDK4-207ENST00000550419 RAPGEF2Q9Y4G8 1499 aa29.29■■■□□ 2.28
CDK4-207ENST00000550419 PRXQ9BXM0 1461 aa29.24■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms