RNA–Protein interactions for RNA: ENST00000500090.2

YIPF3-209, Transcript of Yip1 domain family member 3, humanhuman

TSL 3

Gene YIPF3, Length 406 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-209ENST00000500090 NISCHQ9Y2I1 1504 aa29.52■■■□□ 2.32
YIPF3-209ENST00000500090 CCDC180Q9P1Z9 1646 aa26.19■■□□□ 1.78
YIPF3-209ENST00000500090 ABCC9O60706 1549 aa25.54■■□□□ 1.68
YIPF3-209ENST00000500090 DCAF8L2P0C7V8 631 aa24.67■■□□□ 1.54
YIPF3-209ENST00000500090 NACADO15069 1562 aa24.65■■□□□ 1.54
YIPF3-209ENST00000500090 RB1CC1Q8TDY2 1594 aa24.64■■□□□ 1.54
YIPF3-209ENST00000500090 ZCCHC6Q5VYS8 1495 aaKnown RBP24.59■■□□□ 1.53
YIPF3-209ENST00000500090 MYO15BQ96JP2 1530 aa24.56■■□□□ 1.52
YIPF3-209ENST00000500090 DCAF1Q9Y4B6 1507 aa24.46■■□□□ 1.51
YIPF3-209ENST00000500090 UNC13AQ9UPW8 1703 aa24■■□□□ 1.43
YIPF3-209ENST00000500090 PABPN1Q86U42 306 aaKnown RBP eCLIP23.91■■□□□ 1.42
YIPF3-209ENST00000500090 SCRIBQ14160 1630 aa23.86■■□□□ 1.41
YIPF3-209ENST00000500090 BICRAQ9NZM4 1560 aa23.85■■□□□ 1.41
YIPF3-209ENST00000500090 SHROOM4Q9ULL8 1493 aa23.68■■□□□ 1.38
YIPF3-209ENST00000500090 DNAJC5BQ9UF47 199 aa23.39■■□□□ 1.33
YIPF3-209ENST00000500090 EIF4G1Q04637 1599 aaKnown RBP23.23■■□□□ 1.31
YIPF3-209ENST00000500090 CC2D2AQ9P2K1 1620 aa23.11■■□□□ 1.29
YIPF3-209ENST00000500090 CECR2Q9BXF3 1484 aa22.97■■□□□ 1.27
YIPF3-209ENST00000500090 BAZ1AQ9NRL2 1556 aaPredicted RBP22.88■■□□□ 1.25
YIPF3-209ENST00000500090 SMARCA4P51532 1647 aa22.86■■□□□ 1.25
YIPF3-209ENST00000500090 NCAPD3P42695 1498 aa22.76■■□□□ 1.23
YIPF3-209ENST00000500090 ATAD2BQ9ULI0 1458 aa22.75■■□□□ 1.23
YIPF3-209ENST00000500090 SMARCA2P51531 1590 aa22.75■■□□□ 1.23
YIPF3-209ENST00000500090 MROH2BQ7Z745 1585 aa22.72■■□□□ 1.23
YIPF3-209ENST00000500090 PEG3Q9GZU2 1588 aa22.67■■□□□ 1.22
YIPF3-209ENST00000500090 HMGXB3Q12766 1538 aa22.62■■□□□ 1.21
YIPF3-209ENST00000500090 BAZ1BQ9UIG0 1483 aaKnown RBP22.56■■□□□ 1.2
YIPF3-209ENST00000500090 RSF1Q96T23 1441 aaPredicted RBP22.52■■□□□ 1.2
YIPF3-209ENST00000500090 WIZO95785 1651 aa22.46■■□□□ 1.19
YIPF3-209ENST00000500090 TOP2AP11388 1531 aaKnown RBP22.26■■□□□ 1.15
YIPF3-209ENST00000500090 LAMC3Q9Y6N6 1575 aa22.12■■□□□ 1.13
YIPF3-209ENST00000500090 NESP48681 1621 aa22.11■■□□□ 1.13
YIPF3-209ENST00000500090 CADPSQ9ULU8 1353 aa22.11■■□□□ 1.13
YIPF3-209ENST00000500090 ERCC6Q03468 1493 aa22.04■■□□□ 1.12
YIPF3-209ENST00000500090 SUPT5HO00267 1087 aaKnown RBP22.02■■□□□ 1.12
YIPF3-209ENST00000500090 CCDC88BA6NC98 1476 aa22.02■■□□□ 1.12
YIPF3-209ENST00000500090 PDS5BQ9NTI5 1447 aa22.01■■□□□ 1.11
YIPF3-209ENST00000500090 CFTRP13569 1480 aa21.97■■□□□ 1.11
YIPF3-209ENST00000500090 KIF21AQ7Z4S6 1674 aa21.82■■□□□ 1.08
YIPF3-209ENST00000500090 FANCD2Q9BXW9 1451 aa21.82■■□□□ 1.08
YIPF3-209ENST00000500090 CUX2O14529 1486 aa21.81■■□□□ 1.08
YIPF3-209ENST00000500090 CEP164Q9UPV0 1460 aa21.78■■□□□ 1.08
YIPF3-209ENST00000500090 PRDM2Q13029 1718 aa21.75■■□□□ 1.07
YIPF3-209ENST00000500090 THOC2Q8NI27 1593 aaKnown RBP21.74■■□□□ 1.07
YIPF3-209ENST00000500090 MRC2Q9UBG0 1479 aa21.73■■□□□ 1.07
YIPF3-209ENST00000500090 WDR62O43379 1518 aa21.65■■□□□ 1.06
YIPF3-209ENST00000500090 URB2Q14146 1524 aaKnown RBP21.56■■□□□ 1.04
YIPF3-209ENST00000500090 ABCC8Q09428 1581 aa21.53■■□□□ 1.04
YIPF3-209ENST00000500090 TOPBP1Q92547 1522 aa21.46■■□□□ 1.03
YIPF3-209ENST00000500090 DNMBPQ6XZF7 1577 aa21.44■■□□□ 1.02
YIPF3-209ENST00000500090 IFT140Q96RY7 1462 aa21.34■■□□□ 1.01
YIPF3-209ENST00000500090 CUX1P39880 1505 aa21.31■■□□□ 1
YIPF3-209ENST00000500090 POLA1P09884 1462 aaPredicted RBP21.28■■□□□ 1
YIPF3-209ENST00000500090 SOGA1O94964 1423 aa21.24■□□□□ 0.99
YIPF3-209ENST00000500090 WRNQ14191 1432 aaPredicted RBP eCLIP21.24■□□□□ 0.99
YIPF3-209ENST00000500090 FGD5Q6ZNL6 1462 aa21.24■□□□□ 0.99
YIPF3-209ENST00000500090 TARBP1Q13395 1621 aaKnown RBP21.21■□□□□ 0.99
YIPF3-209ENST00000500090 ZNF608Q9ULD9 1512 aaPredicted RBP21.19■□□□□ 0.98
YIPF3-209ENST00000500090 RAD54L2Q9Y4B4 1467 aa21.18■□□□□ 0.98
YIPF3-209ENST00000500090 TOP2BQ02880 1626 aa21.17■□□□□ 0.98
YIPF3-209ENST00000500090 BIVM-ERCC5R4GMW8 1640 aa21.15■□□□□ 0.98
YIPF3-209ENST00000500090 SYNJ1O43426 1573 aa21.13■□□□□ 0.97
YIPF3-209ENST00000500090 AQRO60306 1485 aaKnown RBP eCLIP21.1■□□□□ 0.972e-8■■■□□ 18.7
YIPF3-209ENST00000500090 WDR97A6NE52 1622 aa21.1■□□□□ 0.97
YIPF3-209ENST00000500090 EIF4G3O43432 1585 aaKnown RBP21.09■□□□□ 0.97
YIPF3-209ENST00000500090 TDRD9Q8NDG6 1382 aaKnown RBP21.09■□□□□ 0.97
YIPF3-209ENST00000500090 DNAJC5Q9H3Z4 198 aa21.07■□□□□ 0.96
YIPF3-209ENST00000500090 ABCA10Q8WWZ4 1543 aa21.07■□□□□ 0.96
YIPF3-209ENST00000500090 GAPVD1Q14C86 1478 aa20.99■□□□□ 0.95
YIPF3-209ENST00000500090 GRIN2BQ13224 1484 aa20.97■□□□□ 0.95
YIPF3-209ENST00000500090 OSCARQ8IYS5 282 aa20.96■□□□□ 0.95
YIPF3-209ENST00000500090 ABCA5Q8WWZ7 1642 aa20.93■□□□□ 0.94
YIPF3-209ENST00000500090 MAGI1Q96QZ7 1491 aaPredicted RBP20.92■□□□□ 0.94
YIPF3-209ENST00000500090 SNAPC4Q5SXM2 1469 aa20.89■□□□□ 0.94
YIPF3-209ENST00000500090 FBLN2P98095 1184 aa20.87■□□□□ 0.93
YIPF3-209ENST00000500090 PBRM1Q86U86 1689 aa20.86■□□□□ 0.93
YIPF3-209ENST00000500090 CHMP7Q8WUX9 453 aaPredicted RBP20.85■□□□□ 0.93
YIPF3-209ENST00000500090 TRIM41Q8WV44 630 aa20.83■□□□□ 0.93
YIPF3-209ENST00000500090 SYNJ2O15056 1496 aa20.82■□□□□ 0.92
YIPF3-209ENST00000500090 KIF27Q86VH2 1401 aa20.82■□□□□ 0.92
YIPF3-209ENST00000500090 ERICH3Q5RHP9 1530 aa20.82■□□□□ 0.92
YIPF3-209ENST00000500090 CHD1O14646 1710 aa20.79■□□□□ 0.92
YIPF3-209ENST00000500090 FHAD1B1AJZ9 1412 aa20.76■□□□□ 0.91
YIPF3-209ENST00000500090 IGF1RP08069 1367 aa20.72■□□□□ 0.91
YIPF3-209ENST00000500090 ADAMTS12P58397 1594 aa20.72■□□□□ 0.91
YIPF3-209ENST00000500090 GRIN2AQ12879 1464 aa20.69■□□□□ 0.9
YIPF3-209ENST00000500090 CUL7Q14999 1698 aa20.62■□□□□ 0.89
YIPF3-209ENST00000500090 CHIC1Q5VXU3 224 aa20.61■□□□□ 0.89
YIPF3-209ENST00000500090 CLASP1Q7Z460 1538 aa20.61■□□□□ 0.89
YIPF3-209ENST00000500090 CARMIL1Q5VZK9 1371 aa20.6■□□□□ 0.89
YIPF3-209ENST00000500090 NUP160Q12769 1436 aa20.6■□□□□ 0.89
YIPF3-209ENST00000500090 RUSC2Q8N2Y8 1516 aa20.58■□□□□ 0.88
YIPF3-209ENST00000500090 CEP170Q5SW79 1584 aa20.54■□□□□ 0.88
YIPF3-209ENST00000500090 ARHGEF11O15085 1522 aa20.53■□□□□ 0.88
YIPF3-209ENST00000500090 RIMBP3CA6NJZ7 1639 aa20.51■□□□□ 0.87
YIPF3-209ENST00000500090 RIMBP3BA6NNM3 1639 aa20.51■□□□□ 0.87
YIPF3-209ENST00000500090 RIMBP3Q9UFD9 1639 aa20.51■□□□□ 0.87
YIPF3-209ENST00000500090 EEA1Q15075 1411 aa20.5■□□□□ 0.87
YIPF3-209ENST00000500090 RAPGEF2Q9Y4G8 1499 aa20.48■□□□□ 0.87
YIPF3-209ENST00000500090 CSRNP3Q8WYN3 585 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms