RNA–Protein interactions for RNA: ENST00000551888.5

CDK4-210, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 636 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-210ENST00000551888 NISCHQ9Y2I1 1504 aa42.69■■■■■ 4.42
CDK4-210ENST00000551888 CCDC180Q9P1Z9 1646 aa37.94■■■■□ 3.66
CDK4-210ENST00000551888 ABCC9O60706 1549 aa36.92■■■■□ 3.5
CDK4-210ENST00000551888 ZCCHC6Q5VYS8 1495 aaKnown RBP35.63■■■■□ 3.29
CDK4-210ENST00000551888 RB1CC1Q8TDY2 1594 aa35.56■■■■□ 3.28
CDK4-210ENST00000551888 NACADO15069 1562 aa35.55■■■■□ 3.28
CDK4-210ENST00000551888 DCAF8L2P0C7V8 631 aa35.45■■■■□ 3.27
CDK4-210ENST00000551888 MYO15BQ96JP2 1530 aa35.38■■■■□ 3.25
CDK4-210ENST00000551888 DCAF1Q9Y4B6 1507 aa35.32■■■■□ 3.24
CDK4-210ENST00000551888 UNC13AQ9UPW8 1703 aa34.95■■■■□ 3.18
CDK4-210ENST00000551888 SCRIBQ14160 1630 aa34.64■■■■□ 3.14
CDK4-210ENST00000551888 BICRAQ9NZM4 1560 aa34.59■■■■□ 3.13
CDK4-210ENST00000551888 PABPN1Q86U42 306 aaKnown RBP eCLIP34.47■■■■□ 3.11
CDK4-210ENST00000551888 SHROOM4Q9ULL8 1493 aa34.1■■■■□ 3.05
CDK4-210ENST00000551888 DNAJC5BQ9UF47 199 aa33.74■■■□□ 2.99
CDK4-210ENST00000551888 EIF4G1Q04637 1599 aaKnown RBP33.61■■■□□ 2.97
CDK4-210ENST00000551888 CC2D2AQ9P2K1 1620 aa33.44■■■□□ 2.94
CDK4-210ENST00000551888 CECR2Q9BXF3 1484 aa33.28■■■□□ 2.92
CDK4-210ENST00000551888 SMARCA4P51532 1647 aa33.14■■■□□ 2.9
CDK4-210ENST00000551888 BAZ1AQ9NRL2 1556 aaPredicted RBP33.06■■■□□ 2.88
CDK4-210ENST00000551888 MROH2BQ7Z745 1585 aa32.95■■■□□ 2.86
CDK4-210ENST00000551888 ATAD2BQ9ULI0 1458 aa32.86■■■□□ 2.85
CDK4-210ENST00000551888 SMARCA2P51531 1590 aa32.81■■■□□ 2.84
CDK4-210ENST00000551888 PEG3Q9GZU2 1588 aa32.79■■■□□ 2.84
CDK4-210ENST00000551888 NCAPD3P42695 1498 aa32.79■■■□□ 2.84
CDK4-210ENST00000551888 HMGXB3Q12766 1538 aa32.69■■■□□ 2.82
CDK4-210ENST00000551888 WIZO95785 1651 aa32.64■■■□□ 2.82
CDK4-210ENST00000551888 BAZ1BQ9UIG0 1483 aaKnown RBP32.59■■■□□ 2.81
CDK4-210ENST00000551888 RSF1Q96T23 1441 aaPredicted RBP32.58■■■□□ 2.81
CDK4-210ENST00000551888 TOP2AP11388 1531 aaKnown RBP32.24■■■□□ 2.75
CDK4-210ENST00000551888 NESP48681 1621 aa32.04■■■□□ 2.72
CDK4-210ENST00000551888 LAMC3Q9Y6N6 1575 aa31.93■■■□□ 2.7
CDK4-210ENST00000551888 CCDC88BA6NC98 1476 aa31.84■■■□□ 2.69
CDK4-210ENST00000551888 CADPSQ9ULU8 1353 aa31.81■■■□□ 2.68
CDK4-210ENST00000551888 SUPT5HO00267 1087 aaKnown RBP31.78■■■□□ 2.68
CDK4-210ENST00000551888 ERCC6Q03468 1493 aa31.74■■■□□ 2.67
CDK4-210ENST00000551888 KIF21AQ7Z4S6 1674 aa31.73■■■□□ 2.67
CDK4-210ENST00000551888 CFTRP13569 1480 aa31.71■■■□□ 2.67
CDK4-210ENST00000551888 PRDM2Q13029 1718 aa31.62■■■□□ 2.65
CDK4-210ENST00000551888 PDS5BQ9NTI5 1447 aa31.62■■■□□ 2.65
CDK4-210ENST00000551888 THOC2Q8NI27 1593 aaKnown RBP31.56■■■□□ 2.64
CDK4-210ENST00000551888 FANCD2Q9BXW9 1451 aa31.49■■■□□ 2.63
CDK4-210ENST00000551888 CEP164Q9UPV0 1460 aa31.43■■■□□ 2.62
CDK4-210ENST00000551888 CUX2O14529 1486 aa31.36■■■□□ 2.61
CDK4-210ENST00000551888 MRC2Q9UBG0 1479 aa31.36■■■□□ 2.61
CDK4-210ENST00000551888 WDR62O43379 1518 aa31.3■■■□□ 2.6
CDK4-210ENST00000551888 URB2Q14146 1524 aaKnown RBP31.23■■■□□ 2.59
CDK4-210ENST00000551888 TOPBP1Q92547 1522 aa31.04■■■□□ 2.56
CDK4-210ENST00000551888 DNMBPQ6XZF7 1577 aa31.03■■■□□ 2.56
CDK4-210ENST00000551888 ABCC8Q09428 1581 aa30.94■■■□□ 2.54
CDK4-210ENST00000551888 CUX1P39880 1505 aa30.9■■■□□ 2.54
CDK4-210ENST00000551888 POLA1P09884 1462 aaPredicted RBP30.79■■■□□ 2.52
CDK4-210ENST00000551888 IFT140Q96RY7 1462 aa30.75■■■□□ 2.51
CDK4-210ENST00000551888 FGD5Q6ZNL6 1462 aa30.74■■■□□ 2.51
CDK4-210ENST00000551888 TARBP1Q13395 1621 aaKnown RBP30.73■■■□□ 2.51
CDK4-210ENST00000551888 SYNJ1O43426 1573 aa30.71■■■□□ 2.51
CDK4-210ENST00000551888 BIVM-ERCC5R4GMW8 1640 aa30.69■■■□□ 2.5
CDK4-210ENST00000551888 WRNQ14191 1432 aaPredicted RBP eCLIP30.68■■■□□ 2.5
CDK4-210ENST00000551888 ZNF608Q9ULD9 1512 aaPredicted RBP30.68■■■□□ 2.5
CDK4-210ENST00000551888 TOP2BQ02880 1626 aa30.66■■■□□ 2.5
CDK4-210ENST00000551888 RAD54L2Q9Y4B4 1467 aa30.66■■■□□ 2.5
CDK4-210ENST00000551888 EIF4G3O43432 1585 aaKnown RBP30.6■■■□□ 2.49
CDK4-210ENST00000551888 WDR97A6NE52 1622 aa30.59■■■□□ 2.49
CDK4-210ENST00000551888 SOGA1O94964 1423 aa30.58■■■□□ 2.49
CDK4-210ENST00000551888 AQRO60306 1485 aaKnown RBP eCLIP30.47■■■□□ 2.479e-10■■■■■ 41.2
CDK4-210ENST00000551888 ABCA10Q8WWZ4 1543 aa30.42■■■□□ 2.46
CDK4-210ENST00000551888 TDRD9Q8NDG6 1382 aaKnown RBP30.42■■■□□ 2.46
CDK4-210ENST00000551888 ABCA5Q8WWZ7 1642 aa30.37■■■□□ 2.45
CDK4-210ENST00000551888 PBRM1Q86U86 1689 aa30.33■■■□□ 2.45
CDK4-210ENST00000551888 GAPVD1Q14C86 1478 aa30.27■■■□□ 2.44
CDK4-210ENST00000551888 GRIN2BQ13224 1484 aa30.23■■■□□ 2.43
CDK4-210ENST00000551888 SNAPC4Q5SXM2 1469 aa30.22■■■□□ 2.43
CDK4-210ENST00000551888 CHD1O14646 1710 aa30.22■■■□□ 2.43
CDK4-210ENST00000551888 DNAJC5Q9H3Z4 198 aa30.16■■■□□ 2.42
CDK4-210ENST00000551888 MAGI1Q96QZ7 1491 aaPredicted RBP30.14■■■□□ 2.42
CDK4-210ENST00000551888 ADAMTS12P58397 1594 aa30.07■■■□□ 2.4
CDK4-210ENST00000551888 ERICH3Q5RHP9 1530 aa30.06■■■□□ 2.4
CDK4-210ENST00000551888 SYNJ2O15056 1496 aa30.03■■■□□ 2.4
CDK4-210ENST00000551888 OSCARQ8IYS5 282 aa30■■■□□ 2.39
CDK4-210ENST00000551888 KIF27Q86VH2 1401 aa29.99■■■□□ 2.39
CDK4-210ENST00000551888 FBLN2P98095 1184 aa29.97■■■□□ 2.39
CDK4-210ENST00000551888 TRIM41Q8WV44 630 aa29.97■■■□□ 2.39
CDK4-210ENST00000551888 FHAD1B1AJZ9 1412 aa29.9■■■□□ 2.38
CDK4-210ENST00000551888 CHMP7Q8WUX9 453 aaPredicted RBP29.9■■■□□ 2.38
CDK4-210ENST00000551888 RUSC2Q8N2Y8 1516 aa29.89■■■□□ 2.38
CDK4-210ENST00000551888 GRIN2AQ12879 1464 aa29.88■■■□□ 2.37
CDK4-210ENST00000551888 IGF1RP08069 1367 aa29.87■■■□□ 2.37
CDK4-210ENST00000551888 CUL7Q14999 1698 aa29.85■■■□□ 2.37
CDK4-210ENST00000551888 CLASP1Q7Z460 1538 aa29.84■■■□□ 2.37
CDK4-210ENST00000551888 CEP170Q5SW79 1584 aa29.79■■■□□ 2.36
CDK4-210ENST00000551888 CHIC1Q5VXU3 224 aa29.78■■■□□ 2.36
CDK4-210ENST00000551888 NUP160Q12769 1436 aa29.74■■■□□ 2.35
CDK4-210ENST00000551888 RIMBP3CA6NJZ7 1639 aa29.69■■■□□ 2.34
CDK4-210ENST00000551888 RIMBP3BA6NNM3 1639 aa29.69■■■□□ 2.34
CDK4-210ENST00000551888 RIMBP3Q9UFD9 1639 aa29.69■■■□□ 2.34
CDK4-210ENST00000551888 CARMIL1Q5VZK9 1371 aa29.67■■■□□ 2.34
CDK4-210ENST00000551888 ARHGEF11O15085 1522 aa29.66■■■□□ 2.34
CDK4-210ENST00000551888 SHROOM2Q13796 1616 aa29.56■■■□□ 2.32
CDK4-210ENST00000551888 RAPGEF2Q9Y4G8 1499 aa29.55■■■□□ 2.32
CDK4-210ENST00000551888 PRXQ9BXM0 1461 aa29.52■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms