RNA–Protein interactions for RNA: ENST00000578706.5

UBB-208, Transcript of ubiquitin B, humanhuman

TSL 3

Gene UBB, Length 500 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBB-208ENST00000578706 NISCHQ9Y2I1 1504 aa16.45■□□□□ 0.22
UBB-208ENST00000578706 ABCC9O60706 1549 aa15.62■□□□□ 0.09
UBB-208ENST00000578706 DNAJC5BQ9UF47 199 aa15.24■□□□□ 0.03
UBB-208ENST00000578706 CCDC180Q9P1Z9 1646 aa15.04■□□□□ -0
UBB-208ENST00000578706 RB1CC1Q8TDY2 1594 aa14.56□□□□□ -0.08
UBB-208ENST00000578706 PABPN1Q86U42 306 aaKnown RBP eCLIP14.41□□□□□ -0.1
UBB-208ENST00000578706 UNC13AQ9UPW8 1703 aa14.37□□□□□ -0.11
UBB-208ENST00000578706 DNAJC5Q9H3Z4 198 aa14.36□□□□□ -0.11
UBB-208ENST00000578706 NACADO15069 1562 aa14.32□□□□□ -0.12
UBB-208ENST00000578706 BICRAQ9NZM4 1560 aa14.27□□□□□ -0.12
UBB-208ENST00000578706 CECR2Q9BXF3 1484 aa14.12□□□□□ -0.15
UBB-208ENST00000578706 CC2D2AQ9P2K1 1620 aa14.1□□□□□ -0.15
UBB-208ENST00000578706 DCAF8L2P0C7V8 631 aa14□□□□□ -0.17
UBB-208ENST00000578706 MYO15BQ96JP2 1530 aa13.94□□□□□ -0.18
UBB-208ENST00000578706 EIF4G1Q04637 1599 aaKnown RBP13.92□□□□□ -0.18
UBB-208ENST00000578706 SHROOM4Q9ULL8 1493 aa13.91□□□□□ -0.18
UBB-208ENST00000578706 CUX2O14529 1486 aa13.67□□□□□ -0.22
UBB-208ENST00000578706 SCRIBQ14160 1630 aa13.67□□□□□ -0.22
UBB-208ENST00000578706 DCAF1Q9Y4B6 1507 aa13.54□□□□□ -0.24
UBB-208ENST00000578706 ZCCHC6Q5VYS8 1495 aaKnown RBP13.52□□□□□ -0.25
UBB-208ENST00000578706 ERCC6Q03468 1493 aa13.45□□□□□ -0.26
UBB-208ENST00000578706 TRIM41Q8WV44 630 aa13.44□□□□□ -0.26
UBB-208ENST00000578706 THOC2Q8NI27 1593 aaKnown RBP13.29□□□□□ -0.28
UBB-208ENST00000578706 NESP48681 1621 aa13.28□□□□□ -0.28
UBB-208ENST00000578706 NCAPD3P42695 1498 aa13.24□□□□□ -0.29
UBB-208ENST00000578706 ATAD2BQ9ULI0 1458 aa13.13□□□□□ -0.31
UBB-208ENST00000578706 SMARCA2P51531 1590 aa13.11□□□□□ -0.31
UBB-208ENST00000578706 KIF21AQ7Z4S6 1674 aa13.11□□□□□ -0.31
UBB-208ENST00000578706 HMGXB3Q12766 1538 aa13.1□□□□□ -0.31
UBB-208ENST00000578706 LAMC3Q9Y6N6 1575 aa13.03□□□□□ -0.32
UBB-208ENST00000578706 BAZ1AQ9NRL2 1556 aaPredicted RBP13.03□□□□□ -0.32
UBB-208ENST00000578706 SMARCA4P51532 1647 aa12.99□□□□□ -0.33
UBB-208ENST00000578706 WDR62O43379 1518 aa12.93□□□□□ -0.34
UBB-208ENST00000578706 BAZ1BQ9UIG0 1483 aaKnown RBP12.93□□□□□ -0.34
UBB-208ENST00000578706 PDS5BQ9NTI5 1447 aa12.92□□□□□ -0.34
UBB-208ENST00000578706 RIMBP3CA6NJZ7 1639 aa12.91□□□□□ -0.34
UBB-208ENST00000578706 RIMBP3BA6NNM3 1639 aa12.91□□□□□ -0.34
UBB-208ENST00000578706 RIMBP3Q9UFD9 1639 aa12.91□□□□□ -0.34
UBB-208ENST00000578706 MRC2Q9UBG0 1479 aa12.91□□□□□ -0.34
UBB-208ENST00000578706 OSCARQ8IYS5 282 aa12.88□□□□□ -0.35
UBB-208ENST00000578706 PEG3Q9GZU2 1588 aa12.87□□□□□ -0.35
UBB-208ENST00000578706 ARHGEF11O15085 1522 aa12.79□□□□□ -0.36
UBB-208ENST00000578706 CADPSQ9ULU8 1353 aa12.78□□□□□ -0.36
UBB-208ENST00000578706 CEP164Q9UPV0 1460 aa12.71□□□□□ -0.38
UBB-208ENST00000578706 MROH2BQ7Z745 1585 aa12.69□□□□□ -0.38
UBB-208ENST00000578706 AEBP2Q6ZN18 517 aaPredicted RBP12.69□□□□□ -0.38
UBB-208ENST00000578706 FANCD2Q9BXW9 1451 aa12.65□□□□□ -0.38
UBB-208ENST00000578706 TRHP20396 242 aaPredicted RBP12.65□□□□□ -0.38
UBB-208ENST00000578706 URB2Q14146 1524 aaKnown RBP12.64□□□□□ -0.39
UBB-208ENST00000578706 CYB5RLQ6IPT4 315 aa12.64□□□□□ -0.39
UBB-208ENST00000578706 ARAP1Q96P48 1450 aa12.64□□□□□ -0.39
UBB-208ENST00000578706 ZNF608Q9ULD9 1512 aaPredicted RBP12.58□□□□□ -0.4
UBB-208ENST00000578706 CFTRP13569 1480 aa12.54□□□□□ -0.4
UBB-208ENST00000578706 CHD1O14646 1710 aa12.53□□□□□ -0.4
UBB-208ENST00000578706 WIZO95785 1651 aa12.51□□□□□ -0.41
UBB-208ENST00000578706 EIF4G3O43432 1585 aaKnown RBP12.49□□□□□ -0.41
UBB-208ENST00000578706 IFT140Q96RY7 1462 aa12.47□□□□□ -0.41
UBB-208ENST00000578706 RSF1Q96T23 1441 aaPredicted RBP12.47□□□□□ -0.41
UBB-208ENST00000578706 PRDM2Q13029 1718 aa12.41□□□□□ -0.42
UBB-208ENST00000578706 TOPBP1Q92547 1522 aa12.37□□□□□ -0.43
UBB-208ENST00000578706 ILDR1Q86SU0 546 aaPredicted RBP12.37□□□□□ -0.43
UBB-208ENST00000578706 CLASP1Q7Z460 1538 aa12.37□□□□□ -0.43
UBB-208ENST00000578706 AQRO60306 1485 aaKnown RBP eCLIP12.35□□□□□ -0.43
UBB-208ENST00000578706 TARBP1Q13395 1621 aaKnown RBP12.35□□□□□ -0.43
UBB-208ENST00000578706 FBLN2P98095 1184 aa12.29□□□□□ -0.44
UBB-208ENST00000578706 TOP2AP11388 1531 aaKnown RBP12.28□□□□□ -0.44
UBB-208ENST00000578706 DNMBPQ6XZF7 1577 aa12.26□□□□□ -0.45
UBB-208ENST00000578706 SYNJ1O43426 1573 aa12.22□□□□□ -0.45
UBB-208ENST00000578706 ABCC8Q09428 1581 aa12.22□□□□□ -0.45
UBB-208ENST00000578706 POLA1P09884 1462 aaPredicted RBP12.21□□□□□ -0.45
UBB-208ENST00000578706 GAPVD1Q14C86 1478 aa12.21□□□□□ -0.45
UBB-208ENST00000578706 SNAPC4Q5SXM2 1469 aa12.21□□□□□ -0.45
UBB-208ENST00000578706 KIF13AQ9H1H9 1805 aa12.2□□□□□ -0.46
UBB-208ENST00000578706 RAD54L2Q9Y4B4 1467 aa12.18□□□□□ -0.46
UBB-208ENST00000578706 TDRD9Q8NDG6 1382 aaKnown RBP12.17□□□□□ -0.46
UBB-208ENST00000578706 ERCC6L2Q5T890 1561 aa12.16□□□□□ -0.46
UBB-208ENST00000578706 CCDC88BA6NC98 1476 aa12.14□□□□□ -0.47
UBB-208ENST00000578706 KDM4FA0A1W2PPD8 638 aa12.14□□□□□ -0.47
UBB-208ENST00000578706 MAGI1Q96QZ7 1491 aaPredicted RBP12.13□□□□□ -0.47
UBB-208ENST00000578706 WDR97A6NE52 1622 aa12.11□□□□□ -0.47
UBB-208ENST00000578706 SYNJ2O15056 1496 aa12.1□□□□□ -0.47
UBB-208ENST00000578706 CHMP7Q8WUX9 453 aaPredicted RBP12.1□□□□□ -0.47
UBB-208ENST00000578706 SOGA1O94964 1423 aa12.08□□□□□ -0.48
UBB-208ENST00000578706 GRIN2BQ13224 1484 aa12.06□□□□□ -0.48
UBB-208ENST00000578706 PBRM1Q86U86 1689 aa12.04□□□□□ -0.48
UBB-208ENST00000578706 FGD5Q6ZNL6 1462 aa12.04□□□□□ -0.48
UBB-208ENST00000578706 CEP170Q5SW79 1584 aa12.02□□□□□ -0.49
UBB-208ENST00000578706 SHROOM2Q13796 1616 aa11.99□□□□□ -0.49
UBB-208ENST00000578706 KDM6BO15054 1643 aa11.97□□□□□ -0.49
UBB-208ENST00000578706 DIP2BQ9P265 1576 aa11.96□□□□□ -0.49
UBB-208ENST00000578706 CUX1P39880 1505 aa11.96□□□□□ -0.49
UBB-208ENST00000578706 ABCC10Q5T3U5 1492 aa11.96□□□□□ -0.49
UBB-208ENST00000578706 HECW2Q9P2P5 1572 aa11.96□□□□□ -0.5
UBB-208ENST00000578706 ABCA5Q8WWZ7 1642 aa11.94□□□□□ -0.5
UBB-208ENST00000578706 GRIN2AQ12879 1464 aa11.94□□□□□ -0.5
UBB-208ENST00000578706 NUP160Q12769 1436 aa11.94□□□□□ -0.5
UBB-208ENST00000578706 MAPKBP1O60336 1514 aa11.91□□□□□ -0.5
UBB-208ENST00000578706 FAM69CQ0P6D2 419 aa11.91□□□□□ -0.5
UBB-208ENST00000578706 ADGRL1O94910 1474 aa11.9□□□□□ -0.5
UBB-208ENST00000578706 TSPOAP1O95153 1857 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms