RNA–Protein interactions for RNA: ENST00000434290.5

RCC1-210, Transcript of regulator of chromosome condensation 1, humanhuman

TSL 5

Gene RCC1, Length 1,070 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-210ENST00000434290 NISCHQ9Y2I1 1504 aa32.01■■■□□ 2.72
RCC1-210ENST00000434290 CCDC180Q9P1Z9 1646 aa28.47■■■□□ 2.15
RCC1-210ENST00000434290 ABCC9O60706 1549 aa27.86■■■□□ 2.05
RCC1-210ENST00000434290 RB1CC1Q8TDY2 1594 aa26.84■■□□□ 1.89
RCC1-210ENST00000434290 NACADO15069 1562 aa26.81■■□□□ 1.88
RCC1-210ENST00000434290 DCAF8L2P0C7V8 631 aa26.75■■□□□ 1.87
RCC1-210ENST00000434290 MYO15BQ96JP2 1530 aa26.69■■□□□ 1.86
RCC1-210ENST00000434290 ZCCHC6Q5VYS8 1495 aaKnown RBP26.65■■□□□ 1.86
RCC1-210ENST00000434290 DCAF1Q9Y4B6 1507 aa26.54■■□□□ 1.84
RCC1-210ENST00000434290 UNC13AQ9UPW8 1703 aa26.14■■□□□ 1.77
RCC1-210ENST00000434290 PABPN1Q86U42 306 aaKnown RBP eCLIP26.04■■□□□ 1.76
RCC1-210ENST00000434290 BICRAQ9NZM4 1560 aa25.98■■□□□ 1.75
RCC1-210ENST00000434290 SCRIBQ14160 1630 aa25.91■■□□□ 1.74
RCC1-210ENST00000434290 SHROOM4Q9ULL8 1493 aa25.8■■□□□ 1.72
RCC1-210ENST00000434290 DNAJC5BQ9UF47 199 aa25.65■■□□□ 1.7
RCC1-210ENST00000434290 EIF4G1Q04637 1599 aaKnown RBP25.31■■□□□ 1.64
RCC1-210ENST00000434290 CC2D2AQ9P2K1 1620 aa25.2■■□□□ 1.62
RCC1-210ENST00000434290 CECR2Q9BXF3 1484 aa25.07■■□□□ 1.6
RCC1-210ENST00000434290 BAZ1AQ9NRL2 1556 aaPredicted RBP24.83■■□□□ 1.57
RCC1-210ENST00000434290 SMARCA4P51532 1647 aa24.83■■□□□ 1.56
RCC1-210ENST00000434290 NCAPD3P42695 1498 aa24.76■■□□□ 1.55
RCC1-210ENST00000434290 ATAD2BQ9ULI0 1458 aa24.73■■□□□ 1.55
RCC1-210ENST00000434290 SMARCA2P51531 1590 aa24.71■■□□□ 1.55
RCC1-210ENST00000434290 MROH2BQ7Z745 1585 aa24.63■■□□□ 1.53
RCC1-210ENST00000434290 PEG3Q9GZU2 1588 aa24.63■■□□□ 1.53
RCC1-210ENST00000434290 HMGXB3Q12766 1538 aa24.61■■□□□ 1.53
RCC1-210ENST00000434290 BAZ1BQ9UIG0 1483 aaKnown RBP24.52■■□□□ 1.52
RCC1-210ENST00000434290 RSF1Q96T23 1441 aaPredicted RBP24.38■■□□□ 1.49
RCC1-210ENST00000434290 WIZO95785 1651 aa24.34■■□□□ 1.49
RCC1-210ENST00000434290 DNAJC5Q9H3Z4 198 aa24.26■■□□□ 1.47
RCC1-210ENST00000434290 TOP2AP11388 1531 aaKnown RBP24.13■■□□□ 1.45
RCC1-210ENST00000434290 LAMC3Q9Y6N6 1575 aa24.08■■□□□ 1.45
RCC1-210ENST00000434290 NESP48681 1621 aa24.08■■□□□ 1.45
RCC1-210ENST00000434290 SUPT5HO00267 1087 aaKnown RBP24.05■■□□□ 1.44
RCC1-210ENST00000434290 ERCC6Q03468 1493 aa24.05■■□□□ 1.44
RCC1-210ENST00000434290 CADPSQ9ULU8 1353 aa24.03■■□□□ 1.44
RCC1-210ENST00000434290 PDS5BQ9NTI5 1447 aa23.95■■□□□ 1.42
RCC1-210ENST00000434290 CFTRP13569 1480 aa23.87■■□□□ 1.41
RCC1-210ENST00000434290 CCDC88BA6NC98 1476 aa23.85■■□□□ 1.41
RCC1-210ENST00000434290 CUX2O14529 1486 aa23.84■■□□□ 1.41
RCC1-210ENST00000434290 KIF21AQ7Z4S6 1674 aa23.78■■□□□ 1.4
RCC1-210ENST00000434290 THOC2Q8NI27 1593 aaKnown RBP23.73■■□□□ 1.39
RCC1-210ENST00000434290 FANCD2Q9BXW9 1451 aa23.72■■□□□ 1.39
RCC1-210ENST00000434290 CEP164Q9UPV0 1460 aa23.69■■□□□ 1.38
RCC1-210ENST00000434290 MRC2Q9UBG0 1479 aa23.67■■□□□ 1.38
RCC1-210ENST00000434290 PRDM2Q13029 1718 aa23.62■■□□□ 1.37
RCC1-210ENST00000434290 WDR62O43379 1518 aa23.59■■□□□ 1.37
RCC1-210ENST00000434290 URB2Q14146 1524 aaKnown RBP23.46■■□□□ 1.35
RCC1-210ENST00000434290 ABCC8Q09428 1581 aa23.4■■□□□ 1.34
RCC1-210ENST00000434290 TOPBP1Q92547 1522 aa23.33■■□□□ 1.32
RCC1-210ENST00000434290 DNMBPQ6XZF7 1577 aa23.3■■□□□ 1.32
RCC1-210ENST00000434290 IFT140Q96RY7 1462 aa23.22■■□□□ 1.31
RCC1-210ENST00000434290 POLA1P09884 1462 aaPredicted RBP23.12■■□□□ 1.29
RCC1-210ENST00000434290 CUX1P39880 1505 aa23.11■■□□□ 1.29
RCC1-210ENST00000434290 TARBP1Q13395 1621 aaKnown RBP23.06■■□□□ 1.28
RCC1-210ENST00000434290 ZNF608Q9ULD9 1512 aaPredicted RBP23.06■■□□□ 1.28
RCC1-210ENST00000434290 SOGA1O94964 1423 aa23.06■■□□□ 1.28
RCC1-210ENST00000434290 FGD5Q6ZNL6 1462 aa23.05■■□□□ 1.28
RCC1-210ENST00000434290 RAD54L2Q9Y4B4 1467 aa23■■□□□ 1.27
RCC1-210ENST00000434290 WRNQ14191 1432 aaPredicted RBP eCLIP22.99■■□□□ 1.27
RCC1-210ENST00000434290 EIF4G3O43432 1585 aaKnown RBP22.96■■□□□ 1.27
RCC1-210ENST00000434290 AQRO60306 1485 aaKnown RBP eCLIP22.95■■□□□ 1.263e-10■■■■■ 37.7
RCC1-210ENST00000434290 WDR97A6NE52 1622 aa22.93■■□□□ 1.26
RCC1-210ENST00000434290 TOP2BQ02880 1626 aa22.93■■□□□ 1.26
RCC1-210ENST00000434290 SYNJ1O43426 1573 aa22.93■■□□□ 1.26
RCC1-210ENST00000434290 TDRD9Q8NDG6 1382 aaKnown RBP22.91■■□□□ 1.26
RCC1-210ENST00000434290 BIVM-ERCC5R4GMW8 1640 aa22.91■■□□□ 1.26
RCC1-210ENST00000434290 OSCARQ8IYS5 282 aa22.88■■□□□ 1.25
RCC1-210ENST00000434290 ABCA10Q8WWZ4 1543 aa22.87■■□□□ 1.25
RCC1-210ENST00000434290 CHIC1Q5VXU3 224 aa22.82■■□□□ 1.24
RCC1-210ENST00000434290 GRIN2BQ13224 1484 aa22.79■■□□□ 1.24
RCC1-210ENST00000434290 GAPVD1Q14C86 1478 aa22.79■■□□□ 1.24
RCC1-210ENST00000434290 MAGI1Q96QZ7 1491 aaPredicted RBP22.74■■□□□ 1.23
RCC1-210ENST00000434290 ABCA5Q8WWZ7 1642 aa22.73■■□□□ 1.23
RCC1-210ENST00000434290 SNAPC4Q5SXM2 1469 aa22.73■■□□□ 1.23
RCC1-210ENST00000434290 TRIM41Q8WV44 630 aa22.7■■□□□ 1.22
RCC1-210ENST00000434290 FBLN2P98095 1184 aa22.69■■□□□ 1.22
RCC1-210ENST00000434290 CHMP7Q8WUX9 453 aaPredicted RBP22.67■■□□□ 1.22
RCC1-210ENST00000434290 PBRM1Q86U86 1689 aa22.67■■□□□ 1.22
RCC1-210ENST00000434290 CHD1O14646 1710 aa22.65■■□□□ 1.22
RCC1-210ENST00000434290 SYNJ2O15056 1496 aa22.65■■□□□ 1.22
RCC1-210ENST00000434290 ERICH3Q5RHP9 1530 aa22.59■■□□□ 1.21
RCC1-210ENST00000434290 FHAD1B1AJZ9 1412 aa22.54■■□□□ 1.2
RCC1-210ENST00000434290 KIF27Q86VH2 1401 aa22.54■■□□□ 1.2
RCC1-210ENST00000434290 ADAMTS12P58397 1594 aa22.51■■□□□ 1.19
RCC1-210ENST00000434290 GRIN2AQ12879 1464 aa22.48■■□□□ 1.19
RCC1-210ENST00000434290 CLASP1Q7Z460 1538 aa22.46■■□□□ 1.19
RCC1-210ENST00000434290 IGF1RP08069 1367 aa22.45■■□□□ 1.18
RCC1-210ENST00000434290 ARHGEF11O15085 1522 aa22.44■■□□□ 1.18
RCC1-210ENST00000434290 RUSC2Q8N2Y8 1516 aa22.43■■□□□ 1.18
RCC1-210ENST00000434290 RIMBP3CA6NJZ7 1639 aa22.42■■□□□ 1.18
RCC1-210ENST00000434290 RIMBP3BA6NNM3 1639 aa22.42■■□□□ 1.18
RCC1-210ENST00000434290 RIMBP3Q9UFD9 1639 aa22.42■■□□□ 1.18
RCC1-210ENST00000434290 NUP160Q12769 1436 aa22.4■■□□□ 1.18
RCC1-210ENST00000434290 CUL7Q14999 1698 aa22.36■■□□□ 1.17
RCC1-210ENST00000434290 CEP170Q5SW79 1584 aa22.33■■□□□ 1.17
RCC1-210ENST00000434290 CARMIL1Q5VZK9 1371 aa22.31■■□□□ 1.16
RCC1-210ENST00000434290 EEA1Q15075 1411 aa22.28■■□□□ 1.16
RCC1-210ENST00000434290 CYB5RLQ6IPT4 315 aa22.26■■□□□ 1.15
RCC1-210ENST00000434290 ARAP1Q96P48 1450 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms