Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC25.24■■□□□ 1.63
TRIM13O60858 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC25.24■■□□□ 1.63
TRIM13O60858 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC25.23■■□□□ 1.63
TRIM13O60858 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC25.23■■□□□ 1.63
TRIM13O60858 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
TRIM13O60858 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
TRIM13O60858 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC25.23■■□□□ 1.63
TRIM13O60858 CREM-210ENST00000374721 2020 ntTSL 5 BASIC25.22■■□□□ 1.63
TRIM13O60858 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC25.22■■□□□ 1.63
TRIM13O60858 EBPL-202ENST00000378268 680 ntTSL 3 BASIC25.22■■□□□ 1.63
TRIM13O60858 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC25.22■■□□□ 1.63
TRIM13O60858 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC25.22■■□□□ 1.63
TRIM13O60858 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC25.21■■□□□ 1.63
TRIM13O60858 AL391121.1-201ENST00000607967 1349 ntBASIC25.21■■□□□ 1.63
TRIM13O60858 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC25.21■■□□□ 1.63
TRIM13O60858 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
TRIM13O60858 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC25.21■■□□□ 1.63
TRIM13O60858 LINC01003-201ENST00000564834 1764 ntBASIC25.2■■□□□ 1.62
TRIM13O60858 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
TRIM13O60858 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC25.19■■□□□ 1.62
TRIM13O60858 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC25.18■■□□□ 1.62
TRIM13O60858 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC25.18■■□□□ 1.62
TRIM13O60858 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
TRIM13O60858 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
TRIM13O60858 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC25.16■■□□□ 1.62
TRIM13O60858 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
TRIM13O60858 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
TRIM13O60858 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
TRIM13O60858 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC25.15■■□□□ 1.62
TRIM13O60858 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC25.14■■□□□ 1.62
TRIM13O60858 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
TRIM13O60858 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
TRIM13O60858 CAHM-201ENST00000604200 896 ntBASIC25.14■■□□□ 1.62
TRIM13O60858 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
TRIM13O60858 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC25.14■■□□□ 1.61
TRIM13O60858 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
TRIM13O60858 AC100797.4-201ENST00000631653 1827 ntBASIC25.13■■□□□ 1.61
TRIM13O60858 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
TRIM13O60858 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC25.11■■□□□ 1.61
TRIM13O60858 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
TRIM13O60858 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC25.11■■□□□ 1.61
TRIM13O60858 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
TRIM13O60858 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
TRIM13O60858 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC25.1■■□□□ 1.61
TRIM13O60858 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
TRIM13O60858 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC25.09■■□□□ 1.61
TRIM13O60858 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
TRIM13O60858 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
TRIM13O60858 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC25.08■■□□□ 1.61
TRIM13O60858 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
TRIM13O60858 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.6
TRIM13O60858 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
TRIM13O60858 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC25.07■■□□□ 1.6
TRIM13O60858 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC25.07■■□□□ 1.6
TRIM13O60858 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
TRIM13O60858 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC25.06■■□□□ 1.6
TRIM13O60858 SHF-207ENST00000560540 2062 ntTSL 5 BASIC25.06■■□□□ 1.6
TRIM13O60858 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC25.06■■□□□ 1.6
TRIM13O60858 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
TRIM13O60858 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
TRIM13O60858 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC25.06■■□□□ 1.6
TRIM13O60858 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC25.05■■□□□ 1.6
TRIM13O60858 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
TRIM13O60858 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC25.05■■□□□ 1.6
TRIM13O60858 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
TRIM13O60858 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
TRIM13O60858 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC25.05■■□□□ 1.6
TRIM13O60858 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
TRIM13O60858 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
TRIM13O60858 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC25.04■■□□□ 1.6
TRIM13O60858 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
TRIM13O60858 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
TRIM13O60858 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
TRIM13O60858 AC136428.2-201ENST00000563187 214 ntBASIC25.03■■□□□ 1.6
TRIM13O60858 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC25.02■■□□□ 1.6
TRIM13O60858 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC25.02■■□□□ 1.6
TRIM13O60858 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
TRIM13O60858 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC25.02■■□□□ 1.6
TRIM13O60858 AP002414.2-202ENST00000590929 1450 ntBASIC25.02■■□□□ 1.6
TRIM13O60858 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
TRIM13O60858 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC25.01■■□□□ 1.59
TRIM13O60858 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
TRIM13O60858 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC25.01■■□□□ 1.59
TRIM13O60858 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC25■■□□□ 1.59
TRIM13O60858 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC25■■□□□ 1.59
TRIM13O60858 AC097358.2-201ENST00000607541 1159 ntBASIC25■■□□□ 1.59
TRIM13O60858 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC25■■□□□ 1.59
TRIM13O60858 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
TRIM13O60858 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
TRIM13O60858 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
TRIM13O60858 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
TRIM13O60858 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC24.99■■□□□ 1.59
TRIM13O60858 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC24.97■■□□□ 1.59
TRIM13O60858 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC24.96■■□□□ 1.59
TRIM13O60858 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
TRIM13O60858 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC24.96■■□□□ 1.59
TRIM13O60858 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC24.96■■□□□ 1.59
TRIM13O60858 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC24.96■■□□□ 1.59
TRIM13O60858 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC24.96■■□□□ 1.59
TRIM13O60858 PKM-203ENST00000389093 2279 ntTSL 5 BASIC24.96■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms