Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
TRIM13O60858 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC32.76■■■□□ 2.83
TRIM13O60858 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC32.61■■■□□ 2.81
TRIM13O60858 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC32.47■■■□□ 2.79
TRIM13O60858 HES6-203ENST00000409160 1600 ntTSL 2 BASIC32.4■■■□□ 2.78
TRIM13O60858 AL356512.1-201ENST00000607453 1739 ntBASIC32.32■■■□□ 2.76
TRIM13O60858 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC32.08■■■□□ 2.73
TRIM13O60858 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC32.06■■■□□ 2.72
TRIM13O60858 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC31.71■■■□□ 2.67
TRIM13O60858 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
TRIM13O60858 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
TRIM13O60858 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC31.51■■■□□ 2.63
TRIM13O60858 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC31.39■■■□□ 2.62
TRIM13O60858 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
TRIM13O60858 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC31.34■■■□□ 2.61
TRIM13O60858 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
TRIM13O60858 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC31.26■■■□□ 2.59
TRIM13O60858 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC31.2■■■□□ 2.59
TRIM13O60858 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC31.02■■■□□ 2.56
TRIM13O60858 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
TRIM13O60858 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC30.96■■■□□ 2.55
TRIM13O60858 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC30.89■■■□□ 2.54
TRIM13O60858 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
TRIM13O60858 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
TRIM13O60858 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC30.61■■■□□ 2.49
TRIM13O60858 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC30.58■■■□□ 2.49
TRIM13O60858 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC30.57■■■□□ 2.48
TRIM13O60858 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC30.52■■■□□ 2.48
TRIM13O60858 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC30.42■■■□□ 2.46
TRIM13O60858 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC30.39■■■□□ 2.46
TRIM13O60858 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC30.12■■■□□ 2.41
TRIM13O60858 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
TRIM13O60858 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC30.02■■■□□ 2.4
TRIM13O60858 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC30.01■■■□□ 2.39
TRIM13O60858 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC29.97■■■□□ 2.39
TRIM13O60858 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
TRIM13O60858 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC29.91■■■□□ 2.38
TRIM13O60858 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC29.91■■■□□ 2.38
TRIM13O60858 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
TRIM13O60858 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC29.81■■■□□ 2.36
TRIM13O60858 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC29.81■■■□□ 2.36
TRIM13O60858 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
TRIM13O60858 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
TRIM13O60858 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC29.63■■■□□ 2.33
TRIM13O60858 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
TRIM13O60858 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
TRIM13O60858 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC29.48■■■□□ 2.31
TRIM13O60858 ILK-212ENST00000532063 1617 ntTSL 2 BASIC29.44■■■□□ 2.3
TRIM13O60858 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
TRIM13O60858 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC29.43■■■□□ 2.3
TRIM13O60858 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
TRIM13O60858 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC29.39■■■□□ 2.3
TRIM13O60858 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
TRIM13O60858 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC29.37■■■□□ 2.29
TRIM13O60858 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC29.36■■■□□ 2.29
TRIM13O60858 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC29.36■■■□□ 2.29
TRIM13O60858 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC29.35■■■□□ 2.29
TRIM13O60858 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
TRIM13O60858 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC29.21■■■□□ 2.27
TRIM13O60858 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
TRIM13O60858 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
TRIM13O60858 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC29.1■■■□□ 2.25
TRIM13O60858 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
TRIM13O60858 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC29.06■■■□□ 2.24
TRIM13O60858 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC29.05■■■□□ 2.24
TRIM13O60858 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
TRIM13O60858 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC29■■■□□ 2.23
TRIM13O60858 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC28.99■■■□□ 2.23
TRIM13O60858 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
TRIM13O60858 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC28.95■■■□□ 2.23
TRIM13O60858 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
TRIM13O60858 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
TRIM13O60858 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC28.76■■■□□ 2.19
TRIM13O60858 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC28.72■■■□□ 2.19
TRIM13O60858 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC28.71■■■□□ 2.19
TRIM13O60858 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
TRIM13O60858 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC28.7■■■□□ 2.19
TRIM13O60858 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC28.69■■■□□ 2.18
TRIM13O60858 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC28.68■■■□□ 2.18
TRIM13O60858 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
TRIM13O60858 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
TRIM13O60858 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
TRIM13O60858 AC145285.7-201ENST00000614819 1539 ntBASIC28.61■■■□□ 2.17
TRIM13O60858 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
TRIM13O60858 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
TRIM13O60858 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC28.57■■■□□ 2.16
TRIM13O60858 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC28.57■■■□□ 2.16
TRIM13O60858 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC28.55■■■□□ 2.16
TRIM13O60858 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC28.55■■■□□ 2.16
TRIM13O60858 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
TRIM13O60858 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC28.51■■■□□ 2.15
TRIM13O60858 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
TRIM13O60858 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC28.51■■■□□ 2.15
TRIM13O60858 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
TRIM13O60858 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
TRIM13O60858 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
TRIM13O60858 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
TRIM13O60858 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
TRIM13O60858 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
TRIM13O60858 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC28.38■■■□□ 2.13
Retrieved 100 of 98,524 protein–RNA pairs in 12.1 ms