RNA–Protein interactions for RNA: ENST00000389093.7

PKM-203, Transcript of pyruvate kinase M1/2, humanhuman

TSL 5 BASIC

Gene PKM, Length 2,279 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-203ENST00000389093 NISCHQ9Y2I1 1504 aa54.11■■■■■ 6.25
PKM-203ENST00000389093 CCDC180Q9P1Z9 1646 aa46.68■■■■■ 5.06
PKM-203ENST00000389093 ZCCHC6Q5VYS8 1495 aaKnown RBP45.62■■■■■ 4.89
PKM-203ENST00000389093 SHROOM4Q9ULL8 1493 aa45.14■■■■■ 4.82
PKM-203ENST00000389093 DCAF8L2P0C7V8 631 aa44.78■■■■■ 4.76
PKM-203ENST00000389093 DCAF1Q9Y4B6 1507 aa44.53■■■■■ 4.72
PKM-203ENST00000389093 SUPT5HO00267 1087 aaKnown RBP43.78■■■■■ 4.6
PKM-203ENST00000389093 ABCC9O60706 1549 aa43.74■■■■■ 4.59
PKM-203ENST00000389093 MYO15BQ96JP2 1530 aa43.63■■■■■ 4.57
PKM-203ENST00000389093 SCRIBQ14160 1630 aa43.37■■■■■ 4.53
PKM-203ENST00000389093 NACADO15069 1562 aa43.27■■■■■ 4.52
PKM-203ENST00000389093 RB1CC1Q8TDY2 1594 aa42.77■■■■■ 4.44
PKM-203ENST00000389093 RSF1Q96T23 1441 aaPredicted RBP42.36■■■■■ 4.37
PKM-203ENST00000389093 UNC13AQ9UPW8 1703 aa42.21■■■■■ 4.35
PKM-203ENST00000389093 CHIC1Q5VXU3 224 aa42.17■■■■■ 4.34
PKM-203ENST00000389093 CECR2Q9BXF3 1484 aa42.17■■■■■ 4.34
PKM-203ENST00000389093 MROH2BQ7Z745 1585 aa41.97■■■■■ 4.31
PKM-203ENST00000389093 WIZO95785 1651 aa41.75■■■■■ 4.27
PKM-203ENST00000389093 BAZ1AQ9NRL2 1556 aaPredicted RBP41.69■■■■■ 4.26
PKM-203ENST00000389093 BICRAQ9NZM4 1560 aa41.6■■■■■ 4.25
PKM-203ENST00000389093 PABPN1Q86U42 306 aaKnown RBP eCLIP41.49■■■■■ 4.233e-11■□□□□ 10.4
PKM-203ENST00000389093 SMARCA4P51532 1647 aa41.48■■■■■ 4.23
PKM-203ENST00000389093 TOP2AP11388 1531 aaKnown RBP41.13■■■■■ 4.17
PKM-203ENST00000389093 TRIM41Q8WV44 630 aa40.93■■■■■ 4.14
PKM-203ENST00000389093 SMARCA2P51531 1590 aa40.85■■■■■ 4.13
PKM-203ENST00000389093 EIF4G1Q04637 1599 aaKnown RBP40.85■■■■■ 4.13
PKM-203ENST00000389093 CCDC88BA6NC98 1476 aa40.81■■■■■ 4.12
PKM-203ENST00000389093 LOC105371045A0A1W2PR82 267 aa40.78■■■■■ 4.12
PKM-203ENST00000389093 PEG3Q9GZU2 1588 aa40.78■■■■■ 4.12
PKM-203ENST00000389093 ATAD2BQ9ULI0 1458 aa40.55■■■■■ 4.08
PKM-203ENST00000389093 FAM9AQ8IZU1 332 aaPredicted RBP40.45■■■■■ 4.07
PKM-203ENST00000389093 BAZ1BQ9UIG0 1483 aaKnown RBP40.4■■■■■ 4.06
PKM-203ENST00000389093 ABCC8Q09428 1581 aa40.4■■■■■ 4.06
PKM-203ENST00000389093 EHMT2Q96KQ7 1210 aa40.05■■■■■ 4
PKM-203ENST00000389093 HMGXB3Q12766 1538 aa39.98■■■■□ 3.99
PKM-203ENST00000389093 NCAPD3P42695 1498 aa39.96■■■■□ 3.99
PKM-203ENST00000389093 WRNQ14191 1432 aaPredicted RBP eCLIP39.83■■■■□ 3.971e-7■■■■□ 20.9
PKM-203ENST00000389093 PCGF6Q9BYE7 350 aa39.78■■■■□ 3.96
PKM-203ENST00000389093 SOGA1O94964 1423 aa39.75■■■■□ 3.95
PKM-203ENST00000389093 SYNJ1O43426 1573 aa39.75■■■■□ 3.95
PKM-203ENST00000389093 RUSC2Q8N2Y8 1516 aa39.61■■■■□ 3.93
PKM-203ENST00000389093 CC2D2AQ9P2K1 1620 aa39.52■■■■□ 3.92
PKM-203ENST00000389093 EEA1Q15075 1411 aa39.51■■■■□ 3.92
PKM-203ENST00000389093 CSRNP3Q8WYN3 585 aa39.4■■■■□ 3.9
PKM-203ENST00000389093 TOP2BQ02880 1626 aa39.39■■■■□ 3.9
PKM-203ENST00000389093 CFTRP13569 1480 aa39.37■■■■□ 3.89
PKM-203ENST00000389093 TRIM26Q12899 539 aaPredicted RBP39.34■■■■□ 3.89
PKM-203ENST00000389093 BIVM-ERCC5R4GMW8 1640 aa39.33■■■■□ 3.89
PKM-203ENST00000389093 PRDM2Q13029 1718 aa39.26■■■■□ 3.88
PKM-203ENST00000389093 HRCP23327 699 aa39.25■■■■□ 3.87
PKM-203ENST00000389093 GOLGA3Q08378 1498 aa39.17■■■■□ 3.86
PKM-203ENST00000389093 CUX1P39880 1505 aa39.16■■■■□ 3.86
PKM-203ENST00000389093 TNIKQ9UKE5 1360 aa39.16■■■■□ 3.86
PKM-203ENST00000389093 CEP162Q5TB80 1403 aa39.15■■■■□ 3.86
PKM-203ENST00000389093 UBTFP17480 764 aaKnown RBP39.1■■■■□ 3.85
PKM-203ENST00000389093 KIF21BO75037 1637 aa39.09■■■■□ 3.85
PKM-203ENST00000389093 CADPSQ9ULU8 1353 aa39.06■■■■□ 3.84
PKM-203ENST00000389093 CEP164Q9UPV0 1460 aa39.06■■■■□ 3.84
PKM-203ENST00000389093 PPARGC1BQ86YN6 1023 aaKnown RBP38.96■■■■□ 3.83
PKM-203ENST00000389093 RAPGEF2Q9Y4G8 1499 aa38.88■■■■□ 3.81
PKM-203ENST00000389093 FANCD2Q9BXW9 1451 aa38.71■■■■□ 3.79
PKM-203ENST00000389093 KIF27Q86VH2 1401 aa38.7■■■■□ 3.79
PKM-203ENST00000389093 NESP48681 1621 aa38.7■■■■□ 3.79
PKM-203ENST00000389093 PRXQ9BXM0 1461 aa38.66■■■■□ 3.78
PKM-203ENST00000389093 ERICH3Q5RHP9 1530 aa38.63■■■■□ 3.77
PKM-203ENST00000389093 CLIP1P30622 1438 aa38.63■■■■□ 3.77
PKM-203ENST00000389093 FGD5Q6ZNL6 1462 aa38.61■■■■□ 3.77
PKM-203ENST00000389093 TTBK1Q5TCY1 1321 aaPredicted RBP38.53■■■■□ 3.76
PKM-203ENST00000389093 DNAJC5BQ9UF47 199 aa38.52■■■■□ 3.76
PKM-203ENST00000389093 CUX2O14529 1486 aa38.52■■■■□ 3.76
PKM-203ENST00000389093 LAMC3Q9Y6N6 1575 aa38.5■■■■□ 3.75
PKM-203ENST00000389093 RANGAP1P46060 587 aaPredicted RBP38.49■■■■□ 3.75
PKM-203ENST00000389093 DNMBPQ6XZF7 1577 aa38.45■■■■□ 3.75
PKM-203ENST00000389093 TOPBP1Q92547 1522 aa38.38■■■■□ 3.74
PKM-203ENST00000389093 VPS8Q8N3P4 1428 aa38.37■■■■□ 3.73
PKM-203ENST00000389093 IGF1RP08069 1367 aa38.31■■■■□ 3.72
PKM-203ENST00000389093 POLA1P09884 1462 aaPredicted RBP38.29■■■■□ 3.72
PKM-203ENST00000389093 RAD54L2Q9Y4B4 1467 aa38.27■■■■□ 3.72
PKM-203ENST00000389093 URB2Q14146 1524 aaKnown RBP38.22■■■■□ 3.71
PKM-203ENST00000389093 KIF21AQ7Z4S6 1674 aa38.2■■■■□ 3.71
PKM-203ENST00000389093 ARAP1Q96P48 1450 aa38.17■■■■□ 3.7
PKM-203ENST00000389093 ABCA10Q8WWZ4 1543 aa38.17■■■■□ 3.7
PKM-203ENST00000389093 PDS5BQ9NTI5 1447 aa38.17■■■■□ 3.7
PKM-203ENST00000389093 CARMIL1Q5VZK9 1371 aa38.14■■■■□ 3.7
PKM-203ENST00000389093 WDR97A6NE52 1622 aa38.05■■■■□ 3.68
PKM-203ENST00000389093 ZEB1P37275 1124 aaPredicted RBP38.04■■■■□ 3.68
PKM-203ENST00000389093 APLP2Q06481 763 aa38.02■■■■□ 3.68
PKM-203ENST00000389093 ARHGAP35Q9NRY4 1499 aa38■■■■□ 3.67
PKM-203ENST00000389093 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP37.92■■■■□ 3.66
PKM-203ENST00000389093 CUL7Q14999 1698 aa37.89■■■■□ 3.66
PKM-203ENST00000389093 ABCA5Q8WWZ7 1642 aa37.85■■■■□ 3.65
PKM-203ENST00000389093 TDRD9Q8NDG6 1382 aaKnown RBP37.82■■■■□ 3.64
PKM-203ENST00000389093 CCER1Q8TC90 406 aaPredicted RBP37.77■■■■□ 3.64
PKM-203ENST00000389093 TARBP1Q13395 1621 aaKnown RBP37.74■■■■□ 3.63
PKM-203ENST00000389093 GAPVD1Q14C86 1478 aa37.73■■■■□ 3.63
PKM-203ENST00000389093 CTTNBP2Q8WZ74 1663 aa37.7■■■■□ 3.63
PKM-203ENST00000389093 KANK4Q5T7N3 995 aaPredicted RBP37.69■■■■□ 3.62
PKM-203ENST00000389093 MRC2Q9UBG0 1479 aa37.68■■■■□ 3.62
PKM-203ENST00000389093 HNRNPUL2Q1KMD3 747 aaKnown RBP37.61■■■■□ 3.61
PKM-203ENST00000389093 P3H3Q8IVL6 736 aa37.54■■■■□ 3.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms