Protein–RNA interactions for Protein: P26368

U2AF2, Splicing factor U2AF 65 kDa subunit, humanhuman

Known RBP eCLIP

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF2P26368 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.37□□□□□ -1.873e-8■■■■□ 23.7
U2AF2P26368 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC1.27□□□□□ -2.213e-8■■■■□ 23.7
U2AF2P26368 SLC25A36-202ENST00000393015 659 ntTSL 521.75■■□□□ 1.075e-8■■■■□ 23.7
U2AF2P26368 SMC4-203ENST00000462668 4235 ntTSL 22.57□□□□□ -23e-6■■■■□ 23.7
U2AF2P26368 SMC4-225ENST00000497203 490 ntTSL 32.54□□□□□ -23e-6■■■■□ 23.7
U2AF2P26368 UQCRC2-204ENST00000563711 2008 ntTSL 28.91□□□□□ -0.982e-7■■■■□ 23.7
U2AF2P26368 MNAT1-201ENST00000261245 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.142e-6■■■■□ 23.7
U2AF2P26368 MNAT1-202ENST00000539616 1220 ntTSL 1 (best) BASIC12.67□□□□□ -0.382e-6■■■■□ 23.7
U2AF2P26368 HSPBAP1-201ENST00000306103 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.054e-7■■■■□ 23.7
U2AF2P26368 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC21.7■■□□□ 1.061e-6■■■■□ 23.7
U2AF2P26368 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.251e-6■■■■□ 23.7
U2AF2P26368 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.357e-6■■■■□ 23.7
U2AF2P26368 UBE2F-206ENST00000416292 552 ntTSL 222.95■■□□□ 1.267e-6■■■■□ 23.7
U2AF2P26368 UBE2F-212ENST00000439338 873 ntTSL 522.95■■□□□ 1.267e-6■■■■□ 23.7
U2AF2P26368 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC22.82■■□□□ 1.247e-6■■■■□ 23.7
U2AF2P26368 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC22.02■■□□□ 1.127e-6■■■■□ 23.7
U2AF2P26368 UBE2F-207ENST00000417231 984 ntTSL 522.01■■□□□ 1.117e-6■■■■□ 23.7
U2AF2P26368 UBE2F-215ENST00000441728 1242 ntTSL 221.69■■□□□ 1.067e-6■■■■□ 23.7
U2AF2P26368 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC20.24■□□□□ 0.837e-6■■■■□ 23.7
U2AF2P26368 RNF216P1-203ENST00000404404 2427 ntBASIC19.68■□□□□ 0.747e-6■■■■□ 23.7
U2AF2P26368 UBE2F-218ENST00000454786 1292 ntTSL 518.79■□□□□ 0.67e-6■■■■□ 23.7
U2AF2P26368 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC17.6■□□□□ 0.417e-6■■■■□ 23.7
U2AF2P26368 RNF216P1-201ENST00000403969 1360 ntTSL 1 (best)17.45■□□□□ 0.387e-6■■■■□ 23.7
U2AF2P26368 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.277e-6■■■■□ 23.7
U2AF2P26368 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC16.53■□□□□ 0.247e-6■■■■□ 23.7
U2AF2P26368 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.27e-6■■■■□ 23.7
U2AF2P26368 UBE2F-219ENST00000455999 760 ntTSL 516.1■□□□□ 0.177e-6■■■■□ 23.7
U2AF2P26368 UBE2F-216ENST00000445676 831 ntTSL 316.04■□□□□ 0.167e-6■■■■□ 23.7
U2AF2P26368 RNF216P1-202ENST00000404006 2201 ntTSL 1 (best)15.82■□□□□ 0.127e-6■■■■□ 23.7
U2AF2P26368 RNF216P1-211ENST00000477090 566 ntTSL 415.18■□□□□ 0.027e-6■■■■□ 23.7
U2AF2P26368 SCAF4-206ENST00000485790 1282 ntTSL 215.15■□□□□ 0.023e-12■■■■□ 23.7
U2AF2P26368 LIAS-202ENST00000340169 1485 ntTSL 5 BASIC13.57□□□□□ -0.247e-6■■■■□ 23.7
U2AF2P26368 LIAS-208ENST00000638422 1776 ntTSL 512.99□□□□□ -0.337e-6■■■■□ 23.7
U2AF2P26368 UBE2F-213ENST00000439780 571 ntTSL 511.85□□□□□ -0.517e-6■■■■□ 23.7
U2AF2P26368 LIAS-203ENST00000381846 1578 ntTSL 3 BASIC11.6□□□□□ -0.557e-6■■■■□ 23.7
U2AF2P26368 UBE2F-208ENST00000433241 803 ntTSL 211.35□□□□□ -0.597e-6■■■■□ 23.7
U2AF2P26368 UBE2F-210ENST00000434137 472 ntTSL 511.35□□□□□ -0.597e-6■■■■□ 23.7
U2AF2P26368 LIAS-222ENST00000640888 4041 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.627e-6■■■■□ 23.7
U2AF2P26368 UBE2F-SCLY-201ENST00000449191 951 ntAPPRIS P5 TSL 3 BASIC11.02□□□□□ -0.657e-6■■■■□ 23.7
U2AF2P26368 LIAS-216ENST00000640349 969 ntTSL 511.02□□□□□ -0.657e-6■■■■□ 23.7
U2AF2P26368 LIAS-220ENST00000640689 2080 ntTSL 510.54□□□□□ -0.727e-6■■■■□ 23.7
U2AF2P26368 RNF216P1-204ENST00000405396 899 ntTSL 310.53□□□□□ -0.727e-6■■■■□ 23.7
U2AF2P26368 LIAS-217ENST00000640381 2259 ntTSL 510.47□□□□□ -0.737e-6■■■■□ 23.7
U2AF2P26368 LIAS-209ENST00000638430 1237 ntTSL 510.37□□□□□ -0.757e-6■■■■□ 23.7
U2AF2P26368 LIAS-201ENST00000261434 1258 ntTSL 5 BASIC10.37□□□□□ -0.757e-6■■■■□ 23.7
U2AF2P26368 UBE2F-211ENST00000434655 648 ntTSL 510.24□□□□□ -0.777e-6■■■■□ 23.7
U2AF2P26368 LIAS-210ENST00000638451 1159 ntTSL 5 BASIC9.89□□□□□ -0.837e-6■■■■□ 23.7
U2AF2P26368 LIAS-213ENST00000639422 4115 ntTSL 59.82□□□□□ -0.847e-6■■■■□ 23.7
U2AF2P26368 RNF216P1-208ENST00000464479 525 ntTSL 49.19□□□□□ -0.947e-6■■■■□ 23.7
U2AF2P26368 KIAA0753-201ENST00000361413 4859 ntAPPRIS P2 TSL 1 (best) BASIC8.88□□□□□ -0.997e-6■■■■□ 23.7
U2AF2P26368 KIAA0753-207ENST00000572370 3263 ntAPPRIS ALT2 TSL 2 BASIC8.69□□□□□ -1.027e-6■■■■□ 23.7
U2AF2P26368 KIAA0753-211ENST00000576823 548 ntTSL 48.24□□□□□ -1.097e-6■■■■□ 23.7
U2AF2P26368 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC7.84□□□□□ -1.157e-6■■■■□ 23.7
U2AF2P26368 KIAA0753-206ENST00000572235 851 ntTSL 36.88□□□□□ -1.317e-6■■■■□ 23.7
U2AF2P26368 KIAA0753-204ENST00000570790 3403 ntTSL 25.84□□□□□ -1.477e-6■■■■□ 23.7
U2AF2P26368 RNF216P1-209ENST00000466622 474 ntTSL 25.8□□□□□ -1.487e-6■■■■□ 23.7
U2AF2P26368 RNF216P1-206ENST00000406608 576 ntTSL 45.1□□□□□ -1.597e-6■■■■□ 23.7
U2AF2P26368 LIAS-219ENST00000640672 1403 ntTSL 54.91□□□□□ -1.627e-6■■■■□ 23.7
U2AF2P26368 CBLB-202ENST00000394030 4475 ntTSL 1 (best)4.59□□□□□ -1.687e-6■■■■□ 23.7
U2AF2P26368 LIAS-211ENST00000638816 675 ntTSL 53.71□□□□□ -1.827e-6■■■■□ 23.7
U2AF2P26368 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.31□□□□□ -2.047e-6■■■■□ 23.7
U2AF2P26368 AC006511.5-201ENST00000639368 1209 ntTSL 516.03■□□□□ 0.163e-6■■■■□ 23.7
U2AF2P26368 NECAP1-216ENST00000639167 2197 ntTSL 5 BASIC12.26□□□□□ -0.453e-6■■■■□ 23.7
U2AF2P26368 NECAP1-201ENST00000339754 2593 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.583e-6■■■■□ 23.7
U2AF2P26368 NECAP1-219ENST00000639811 2175 ntTSL 5 BASIC11.41□□□□□ -0.583e-6■■■■□ 23.7
U2AF2P26368 NECAP1-215ENST00000639071 2578 ntTSL 511.12□□□□□ -0.633e-6■■■■□ 23.7
U2AF2P26368 NECAP1-225ENST00000640209 2473 ntTSL 510.84□□□□□ -0.673e-6■■■■□ 23.7
U2AF2P26368 NECAP1-217ENST00000639276 2646 ntTSL 510.36□□□□□ -0.753e-6■■■■□ 23.7
U2AF2P26368 NECAP1-210ENST00000638237 2517 ntAPPRIS ALT1 TSL 5 BASIC10.17□□□□□ -0.783e-6■■■■□ 23.7
U2AF2P26368 NECAP1-212ENST00000638787 2067 ntTSL 510.04□□□□□ -0.83e-6■■■■□ 23.7
U2AF2P26368 NECAP1-218ENST00000639595 2587 ntTSL 510.01□□□□□ -0.813e-6■■■■□ 23.7
U2AF2P26368 NECAP1-207ENST00000544891 4899 ntTSL 59.84□□□□□ -0.833e-6■■■■□ 23.7
U2AF2P26368 NECAP1-202ENST00000450991 2446 ntTSL 1 (best)9.55□□□□□ -0.883e-6■■■■□ 23.7
U2AF2P26368 NECAP1-227ENST00000640648 5166 ntTSL 59.55□□□□□ -0.883e-6■■■■□ 23.7
U2AF2P26368 NECAP1-221ENST00000639955 3479 ntAPPRIS P2 TSL 5 BASIC9.08□□□□□ -0.963e-6■■■■□ 23.7
U2AF2P26368 NECAP1-214ENST00000639038 2423 ntTSL 59□□□□□ -0.973e-6■■■■□ 23.7
U2AF2P26368 NECAP1-224ENST00000640099 3313 ntTSL 58.81□□□□□ -13e-6■■■■□ 23.7
U2AF2P26368 NECAP1-204ENST00000540083 863 ntTSL 58.73□□□□□ -1.013e-6■■■■□ 23.7
U2AF2P26368 NECAP1-213ENST00000638883 3940 ntTSL 58.72□□□□□ -1.013e-6■■■■□ 23.7
U2AF2P26368 NECAP1-203ENST00000537796 3418 ntTSL 58.6□□□□□ -1.033e-6■■■■□ 23.7
U2AF2P26368 NECAP1-205ENST00000541948 728 ntTSL 58.59□□□□□ -1.033e-6■■■■□ 23.7
U2AF2P26368 NECAP1-208ENST00000545807 3113 ntTSL 58.09□□□□□ -1.113e-6■■■■□ 23.7
U2AF2P26368 NECAP1-226ENST00000640481 3216 ntTSL 57.84□□□□□ -1.153e-6■■■■□ 23.7
U2AF2P26368 NECAP1-222ENST00000640072 3456 ntTSL 57.36□□□□□ -1.233e-6■■■■□ 23.7
U2AF2P26368 CHORDC1-207ENST00000530765 564 ntTSL 4 BASIC11.61□□□□□ -0.556e-21■■■■□ 23.7
U2AF2P26368 CHORDC1-211ENST00000533772 566 ntTSL 58.26□□□□□ -1.098e-7■■■■□ 23.7
U2AF2P26368 PPIA-206ENST00000480603 842 ntTSL 310.01□□□□□ -0.817e-22■■■■□ 23.7
U2AF2P26368 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC32.24■■■□□ 2.751e-41■■■■□ 23.7
U2AF2P26368 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.721e-41■■■■□ 23.7
U2AF2P26368 NFKBIA-203ENST00000554001 1396 ntTSL 516.26■□□□□ 0.191e-41■■■■□ 23.7
U2AF2P26368 NFKBIA-208ENST00000557140 1400 ntTSL 5 BASIC13.34□□□□□ -0.271e-41■■■■□ 23.7
U2AF2P26368 NFKBIA-204ENST00000555371 690 ntTSL 311.69□□□□□ -0.541e-41■■■■□ 23.7
U2AF2P26368 SPC25-201ENST00000282074 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.334e-7■■■■□ 23.7
U2AF2P26368 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC17.04■□□□□ 0.321e-6■■■■□ 23.7
U2AF2P26368 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.171e-6■■■■□ 23.7
U2AF2P26368 COL9A3-213ENST00000489045 838 ntTSL 525.55■■□□□ 1.684e-6■■■■□ 23.7
U2AF2P26368 COL9A3-211ENST00000477612 635 ntTSL 324.33■■□□□ 1.494e-6■■■■□ 23.7
U2AF2P26368 COL9A3-202ENST00000452372 596 ntTSL 522.52■■□□□ 1.24e-6■■■■□ 23.7
U2AF2P26368 C5-204ENST00000480188 619 ntTSL 24.41□□□□□ -1.72e-14■■■■□ 23.7
U2AF2P26368 CC2D1A-204ENST00000587508 1667 ntTSL 523.34■■□□□ 1.332e-13■■■■□ 23.7
Retrieved 100 of 36,523 protein–RNA pairs in 387 ms