RNA–Protein interactions for RNA: ENST00000640072.1

NECAP1-222, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,456 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-222ENST00000640072 SLC24A1O60721 1099 aa11.6□□□□□ -0.55
NECAP1-222ENST00000640072 MYT1Q01538 1121 aa11.27□□□□□ -0.61
NECAP1-222ENST00000640072 PELP1Q8IZL8 1130 aaKnown RBP11.19□□□□□ -0.62
NECAP1-222ENST00000640072 TTBK1Q5TCY1 1321 aaPredicted RBP10.97□□□□□ -0.65
NECAP1-222ENST00000640072 PRKCSHP14314 528 aaPredicted RBP10.83□□□□□ -0.67
NECAP1-222ENST00000640072 ERICH6Q7L0X2 663 aa10.79□□□□□ -0.68
NECAP1-222ENST00000640072 DAXXQ9UER7 740 aaPredicted RBP10.72□□□□□ -0.69
NECAP1-222ENST00000640072 APLP2Q06481 763 aa10.6□□□□□ -0.71
NECAP1-222ENST00000640072 EHMT2Q96KQ7 1210 aa10.43□□□□□ -0.74
NECAP1-222ENST00000640072 PLPPR3Q6T4P5 718 aa10.25□□□□□ -0.77
NECAP1-222ENST00000640072 EIF5BO60841 1220 aaKnown RBP10.23□□□□□ -0.77
NECAP1-222ENST00000640072 NCBP3Q53F19 620 aaKnown RBP10.2□□□□□ -0.78
NECAP1-222ENST00000640072 RTN4Q9NQC3 1192 aaKnown RBP10.19□□□□□ -0.78
NECAP1-222ENST00000640072 BCL11AQ9H165 835 aa10.1□□□□□ -0.79
NECAP1-222ENST00000640072 RANGAP1P46060 587 aaPredicted RBP10.05□□□□□ -0.8
NECAP1-222ENST00000640072 PLEKHG5O94827 1062 aa9.92□□□□□ -0.82
NECAP1-222ENST00000640072 ARXQ96QS3 562 aa9.91□□□□□ -0.82
NECAP1-222ENST00000640072 TIMELESSQ9UNS1 1208 aa9.89□□□□□ -0.83
NECAP1-222ENST00000640072 FAM9AQ8IZU1 332 aaPredicted RBP9.86□□□□□ -0.83
NECAP1-222ENST00000640072 HRCP23327 699 aa9.86□□□□□ -0.83
NECAP1-222ENST00000640072 KLHL34Q8N239 644 aa9.84□□□□□ -0.83
NECAP1-222ENST00000640072 TULP1O00294 542 aaPredicted RBP9.8□□□□□ -0.84
NECAP1-222ENST00000640072 AMER1Q5JTC6 1135 aaPredicted RBP9.76□□□□□ -0.85
NECAP1-222ENST00000640072 PODXL2Q9NZ53 605 aa9.74□□□□□ -0.85
NECAP1-222ENST00000640072 SCAF1Q9H7N4 1312 aaKnown RBP9.71□□□□□ -0.86
NECAP1-222ENST00000640072 HOMEZQ8IX15 550 aa9.68□□□□□ -0.86
NECAP1-222ENST00000640072 PPARGC1BQ86YN6 1023 aaKnown RBP9.63□□□□□ -0.87
NECAP1-222ENST00000640072 CENPBP07199 599 aaPredicted RBP9.6□□□□□ -0.87
NECAP1-222ENST00000640072 KCNA4P22459 653 aa9.55□□□□□ -0.88
NECAP1-222ENST00000640072 NISCHQ9Y2I1 1504 aa9.54□□□□□ -0.88
NECAP1-222ENST00000640072 TAOK2Q9UL54 1235 aa9.52□□□□□ -0.89
NECAP1-222ENST00000640072 TPRNQ4KMQ1 711 aa9.47□□□□□ -0.89
NECAP1-222ENST00000640072 PDIA4P13667 645 aaKnown RBP9.46□□□□□ -0.9
NECAP1-222ENST00000640072 NPM2Q86SE8 214 aaKnown RBP9.46□□□□□ -0.9
NECAP1-222ENST00000640072 AEBP2Q6ZN18 517 aaPredicted RBP9.45□□□□□ -0.9
NECAP1-222ENST00000640072 UBE2Q2Q8WVN8 375 aa9.44□□□□□ -0.9
NECAP1-222ENST00000640072 C14orf37Q86TY3 774 aa9.44□□□□□ -0.9
NECAP1-222ENST00000640072 PCGF6Q9BYE7 350 aa9.43□□□□□ -0.9
NECAP1-222ENST00000640072 PKNOX2Q96KN3 472 aa9.38□□□□□ -0.91
NECAP1-222ENST00000640072 PDE4CQ08493 712 aa9.38□□□□□ -0.91
NECAP1-222ENST00000640072 GTF3C3Q9Y5Q9 886 aa9.36□□□□□ -0.91
NECAP1-222ENST00000640072 NEFLP07196 543 aa9.35□□□□□ -0.91
NECAP1-222ENST00000640072 CHIC1Q5VXU3 224 aa9.35□□□□□ -0.91
NECAP1-222ENST00000640072 ACIN1Q9UKV3 1341 aaKnown RBP9.33□□□□□ -0.92
NECAP1-222ENST00000640072 HAP1P54257 671 aaPredicted RBP9.33□□□□□ -0.92
NECAP1-222ENST00000640072 BCANQ96GW7 911 aa9.33□□□□□ -0.92
NECAP1-222ENST00000640072 CSRNP3Q8WYN3 585 aa9.32□□□□□ -0.92
NECAP1-222ENST00000640072 ANO8Q9HCE9 1232 aaPredicted RBP9.29□□□□□ -0.92
NECAP1-222ENST00000640072 ANP32EQ9BTT0 268 aa9.26□□□□□ -0.93
NECAP1-222ENST00000640072 NEUROD1Q13562 356 aa9.23□□□□□ -0.93
NECAP1-222ENST00000640072 CHMP4AQ9BY43 222 aa9.22□□□□□ -0.93
NECAP1-222ENST00000640072 DHX37Q8IY37 1157 aaKnown RBP9.21□□□□□ -0.93
NECAP1-222ENST00000640072 ZEB1P37275 1124 aaPredicted RBP9.2□□□□□ -0.94
NECAP1-222ENST00000640072 LOC105371045A0A1W2PR82 267 aa9.19□□□□□ -0.94
NECAP1-222ENST00000640072 BCL11BQ9C0K0 894 aaPredicted RBP9.17□□□□□ -0.94
NECAP1-222ENST00000640072 DCAF8L2P0C7V8 631 aa9.16□□□□□ -0.94
NECAP1-222ENST00000640072 TAF7LQ5H9L4 462 aa9.15□□□□□ -0.95
NECAP1-222ENST00000640072 TRIM26Q12899 539 aaPredicted RBP9.13□□□□□ -0.95
NECAP1-222ENST00000640072 SUPT5HO00267 1087 aaKnown RBP9.12□□□□□ -0.95
NECAP1-222ENST00000640072 FBXO3Q9UK99 471 aa9.12□□□□□ -0.95
NECAP1-222ENST00000640072 CDK11BP21127 795 aaKnown RBP9.1□□□□□ -0.95
NECAP1-222ENST00000640072 CDK11AQ9UQ88 783 aaPredicted RBP9.1□□□□□ -0.95
NECAP1-222ENST00000640072 BRD2P25440 801 aaKnown RBP9.09□□□□□ -0.95
NECAP1-222ENST00000640072 CCDC136Q96JN2 1154 aa9.07□□□□□ -0.96
NECAP1-222ENST00000640072 A0A0U1RQG5 324 aaPredicted RBP9.07□□□□□ -0.96
NECAP1-222ENST00000640072 SAMD1Q6SPF0 538 aaPredicted RBP9.05□□□□□ -0.96
NECAP1-222ENST00000640072 FGD1P98174 961 aa9.04□□□□□ -0.96
NECAP1-222ENST00000640072 TMEM132AQ24JP5 1023 aa9.03□□□□□ -0.96
NECAP1-222ENST00000640072 POLR3GLQ9BT43 218 aa9.03□□□□□ -0.96
NECAP1-222ENST00000640072 PLCB2Q00722 1185 aa9.03□□□□□ -0.96
NECAP1-222ENST00000640072 UBTFP17480 764 aaKnown RBP8.97□□□□□ -0.97
NECAP1-222ENST00000640072 PAXIP1Q6ZW49 1069 aaPredicted RBP8.95□□□□□ -0.98
NECAP1-222ENST00000640072 SALL2Q9Y467 1007 aaPredicted RBP8.95□□□□□ -0.98
NECAP1-222ENST00000640072 CNKSR2Q8WXI2 1034 aa8.93□□□□□ -0.98
NECAP1-222ENST00000640072 YTHDC1Q96MU7 727 aaKnown RBP8.91□□□□□ -0.98
NECAP1-222ENST00000640072 CLSPNQ9HAW4 1339 aa8.91□□□□□ -0.98
NECAP1-222ENST00000640072 CFAP44Q96MT7 982 aa8.9□□□□□ -0.98
NECAP1-222ENST00000640072 IRX6P78412 446 aaPredicted RBP8.9□□□□□ -0.99
NECAP1-222ENST00000640072 NAP1L5Q96NT1 182 aaPredicted RBP8.89□□□□□ -0.99
NECAP1-222ENST00000640072 ZNF326Q5BKZ1 582 aaKnown RBP8.88□□□□□ -0.99
NECAP1-222ENST00000640072 HSP90B1P14625 803 aaKnown RBP8.88□□□□□ -0.99
NECAP1-222ENST00000640072 GLIPR1L2Q4G1C9 344 aa8.87□□□□□ -0.99
NECAP1-222ENST00000640072 AAMPQ13685 434 aa8.85□□□□□ -0.99
NECAP1-222ENST00000640072 DEKP35659 375 aaKnown RBP8.84□□□□□ -1
NECAP1-222ENST00000640072 DIEXFQ68CQ4 756 aaKnown RBP8.84□□□□□ -1
NECAP1-222ENST00000640072 IGSF3O75054 1194 aa8.82□□□□□ -1
NECAP1-222ENST00000640072 RBM10P98175 930 aaKnown RBP8.81□□□□□ -1
NECAP1-222ENST00000640072 ERICH6BQ5W0A0 696 aa8.8□□□□□ -1
NECAP1-222ENST00000640072 MYT1LQ9UL68 1186 aa8.79□□□□□ -1
NECAP1-222ENST00000640072 TSHZ2Q9NRE2 1034 aa8.78□□□□□ -1
NECAP1-222ENST00000640072 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.78□□□□□ -1
NECAP1-222ENST00000640072 PPP6R1Q9UPN7 881 aa8.77□□□□□ -1.01
NECAP1-222ENST00000640072 CCDC9Q9Y3X0 531 aaKnown RBP8.77□□□□□ -1.01
NECAP1-222ENST00000640072 RSPH4AQ5TD94 716 aa8.76□□□□□ -1.01
NECAP1-222ENST00000640072 BCCIPQ9P287 314 aaKnown RBP eCLIP8.75□□□□□ -1.01
NECAP1-222ENST00000640072 HMGB1P09429 215 aaKnown RBP8.75□□□□□ -1.01
NECAP1-222ENST00000640072 SLC4A1APQ9BWU0 796 aaKnown RBP8.74□□□□□ -1.01
NECAP1-222ENST00000640072 RSPH6AQ9H0K4 717 aa8.74□□□□□ -1.01
NECAP1-222ENST00000640072 SHROOM4Q9ULL8 1493 aa8.73□□□□□ -1.01
NECAP1-222ENST00000640072 ZMYND15Q9H091 742 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms