RNA–Protein interactions for RNA: ENST00000494947.5

RNF216P1-213, Transcript of ring finger protein 216 pseudogene 1, humanhuman

TSL 2 BASIC

Gene RNF216P1, Length 946 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216P1-213ENST00000494947 NISCHQ9Y2I1 1504 aa38.02■■■■□ 3.68
RNF216P1-213ENST00000494947 ABCC9O60706 1549 aa34.38■■■■□ 3.09
RNF216P1-213ENST00000494947 CCDC180Q9P1Z9 1646 aa34.08■■■■□ 3.05
RNF216P1-213ENST00000494947 RB1CC1Q8TDY2 1594 aa32.58■■■□□ 2.81
RNF216P1-213ENST00000494947 DNAJC5BQ9UF47 199 aa32.47■■■□□ 2.79
RNF216P1-213ENST00000494947 DCAF8L2P0C7V8 631 aa32.39■■■□□ 2.78
RNF216P1-213ENST00000494947 NACADO15069 1562 aa32.32■■■□□ 2.76
RNF216P1-213ENST00000494947 PABPN1Q86U42 306 aaKnown RBP eCLIP32.08■■■□□ 2.73
RNF216P1-213ENST00000494947 UNC13AQ9UPW8 1703 aa31.85■■■□□ 2.69
RNF216P1-213ENST00000494947 MYO15BQ96JP2 1530 aa31.77■■■□□ 2.68
RNF216P1-213ENST00000494947 BICRAQ9NZM4 1560 aa31.64■■■□□ 2.66
RNF216P1-213ENST00000494947 ZCCHC6Q5VYS8 1495 aaKnown RBP31.41■■■□□ 2.62
RNF216P1-213ENST00000494947 DCAF1Q9Y4B6 1507 aa31.32■■■□□ 2.6
RNF216P1-213ENST00000494947 SCRIBQ14160 1630 aa31.13■■■□□ 2.57
RNF216P1-213ENST00000494947 SHROOM4Q9ULL8 1493 aa31.09■■■□□ 2.57
RNF216P1-213ENST00000494947 CC2D2AQ9P2K1 1620 aa31■■■□□ 2.55
RNF216P1-213ENST00000494947 CECR2Q9BXF3 1484 aa30.96■■■□□ 2.55
RNF216P1-213ENST00000494947 EIF4G1Q04637 1599 aaKnown RBP30.88■■■□□ 2.53
RNF216P1-213ENST00000494947 DNAJC5Q9H3Z4 198 aa29.9■■■□□ 2.38
RNF216P1-213ENST00000494947 NCAPD3P42695 1498 aa29.87■■■□□ 2.37
RNF216P1-213ENST00000494947 ATAD2BQ9ULI0 1458 aa29.76■■■□□ 2.35
RNF216P1-213ENST00000494947 ERCC6Q03468 1493 aa29.68■■■□□ 2.34
RNF216P1-213ENST00000494947 SMARCA4P51532 1647 aa29.66■■■□□ 2.34
RNF216P1-213ENST00000494947 SMARCA2P51531 1590 aa29.63■■■□□ 2.33
RNF216P1-213ENST00000494947 CUX2O14529 1486 aa29.61■■■□□ 2.33
RNF216P1-213ENST00000494947 HMGXB3Q12766 1538 aa29.56■■■□□ 2.32
RNF216P1-213ENST00000494947 BAZ1AQ9NRL2 1556 aaPredicted RBP29.49■■■□□ 2.31
RNF216P1-213ENST00000494947 NESP48681 1621 aa29.49■■■□□ 2.31
RNF216P1-213ENST00000494947 BAZ1BQ9UIG0 1483 aaKnown RBP29.46■■■□□ 2.31
RNF216P1-213ENST00000494947 PEG3Q9GZU2 1588 aa29.33■■■□□ 2.29
RNF216P1-213ENST00000494947 MROH2BQ7Z745 1585 aa29.31■■■□□ 2.28
RNF216P1-213ENST00000494947 LAMC3Q9Y6N6 1575 aa29.18■■■□□ 2.26
RNF216P1-213ENST00000494947 THOC2Q8NI27 1593 aaKnown RBP29.11■■■□□ 2.25
RNF216P1-213ENST00000494947 PDS5BQ9NTI5 1447 aa29.08■■■□□ 2.25
RNF216P1-213ENST00000494947 KIF21AQ7Z4S6 1674 aa29.05■■■□□ 2.24
RNF216P1-213ENST00000494947 CADPSQ9ULU8 1353 aa29■■■□□ 2.23
RNF216P1-213ENST00000494947 WIZO95785 1651 aa28.96■■■□□ 2.23
RNF216P1-213ENST00000494947 MRC2Q9UBG0 1479 aa28.79■■■□□ 2.2
RNF216P1-213ENST00000494947 WDR62O43379 1518 aa28.69■■■□□ 2.18
RNF216P1-213ENST00000494947 RSF1Q96T23 1441 aaPredicted RBP28.66■■■□□ 2.18
RNF216P1-213ENST00000494947 CEP164Q9UPV0 1460 aa28.66■■■□□ 2.18
RNF216P1-213ENST00000494947 FANCD2Q9BXW9 1451 aa28.64■■■□□ 2.17
RNF216P1-213ENST00000494947 TRIM41Q8WV44 630 aa28.59■■■□□ 2.17
RNF216P1-213ENST00000494947 CFTRP13569 1480 aa28.59■■■□□ 2.17
RNF216P1-213ENST00000494947 TOP2AP11388 1531 aaKnown RBP28.52■■■□□ 2.16
RNF216P1-213ENST00000494947 URB2Q14146 1524 aaKnown RBP28.4■■■□□ 2.14
RNF216P1-213ENST00000494947 OSCARQ8IYS5 282 aa28.39■■■□□ 2.14
RNF216P1-213ENST00000494947 CCDC88BA6NC98 1476 aa28.28■■■□□ 2.12
RNF216P1-213ENST00000494947 PRDM2Q13029 1718 aa28.22■■■□□ 2.11
RNF216P1-213ENST00000494947 ZNF608Q9ULD9 1512 aaPredicted RBP28.1■■■□□ 2.09
RNF216P1-213ENST00000494947 IFT140Q96RY7 1462 aa28.09■■■□□ 2.09
RNF216P1-213ENST00000494947 TOPBP1Q92547 1522 aa28.07■■■□□ 2.08
RNF216P1-213ENST00000494947 ABCC8Q09428 1581 aa27.99■■■□□ 2.07
RNF216P1-213ENST00000494947 DNMBPQ6XZF7 1577 aa27.92■■■□□ 2.06
RNF216P1-213ENST00000494947 RIMBP3CA6NJZ7 1639 aa27.92■■■□□ 2.06
RNF216P1-213ENST00000494947 RIMBP3BA6NNM3 1639 aa27.92■■■□□ 2.06
RNF216P1-213ENST00000494947 RIMBP3Q9UFD9 1639 aa27.92■■■□□ 2.06
RNF216P1-213ENST00000494947 AQRO60306 1485 aaKnown RBP eCLIP27.87■■■□□ 2.056e-7■■■□□ 18.4
RNF216P1-213ENST00000494947 EIF4G3O43432 1585 aaKnown RBP27.86■■■□□ 2.05
RNF216P1-213ENST00000494947 FBLN2P98095 1184 aa27.81■■■□□ 2.04
RNF216P1-213ENST00000494947 ARHGEF11O15085 1522 aa27.81■■■□□ 2.04
RNF216P1-213ENST00000494947 TARBP1Q13395 1621 aaKnown RBP27.81■■■□□ 2.04
RNF216P1-213ENST00000494947 CYB5RLQ6IPT4 315 aa27.77■■■□□ 2.04
RNF216P1-213ENST00000494947 POLA1P09884 1462 aaPredicted RBP27.76■■■□□ 2.04
RNF216P1-213ENST00000494947 RAD54L2Q9Y4B4 1467 aa27.73■■■□□ 2.03
RNF216P1-213ENST00000494947 CHD1O14646 1710 aa27.72■■■□□ 2.03
RNF216P1-213ENST00000494947 SOGA1O94964 1423 aa27.71■■■□□ 2.03
RNF216P1-213ENST00000494947 TDRD9Q8NDG6 1382 aaKnown RBP27.7■■■□□ 2.02
RNF216P1-213ENST00000494947 FGD5Q6ZNL6 1462 aa27.58■■■□□ 2.01
RNF216P1-213ENST00000494947 CHMP7Q8WUX9 453 aaPredicted RBP27.55■■■□□ 2
RNF216P1-213ENST00000494947 TRHP20396 242 aaPredicted RBP27.53■■■□□ 2
RNF216P1-213ENST00000494947 CUX1P39880 1505 aa27.52■■■□□ 2
RNF216P1-213ENST00000494947 ARAP1Q96P48 1450 aa27.52■■■□□ 2
RNF216P1-213ENST00000494947 SNAPC4Q5SXM2 1469 aa27.51■■■□□ 2
RNF216P1-213ENST00000494947 SUPT5HO00267 1087 aaKnown RBP27.44■■□□□ 1.98
RNF216P1-213ENST00000494947 WDR97A6NE52 1622 aa27.44■■□□□ 1.98
RNF216P1-213ENST00000494947 GRIN2BQ13224 1484 aa27.43■■□□□ 1.98
RNF216P1-213ENST00000494947 MAGI1Q96QZ7 1491 aaPredicted RBP27.4■■□□□ 1.98
RNF216P1-213ENST00000494947 CLASP1Q7Z460 1538 aa27.36■■□□□ 1.97
RNF216P1-213ENST00000494947 SYNJ1O43426 1573 aa27.36■■□□□ 1.97
RNF216P1-213ENST00000494947 SYNJ2O15056 1496 aa27.34■■□□□ 1.97
RNF216P1-213ENST00000494947 GAPVD1Q14C86 1478 aa27.33■■□□□ 1.97
RNF216P1-213ENST00000494947 PBRM1Q86U86 1689 aa27.27■■□□□ 1.96
RNF216P1-213ENST00000494947 ABCA10Q8WWZ4 1543 aa27.24■■□□□ 1.95
RNF216P1-213ENST00000494947 ABCA5Q8WWZ7 1642 aa27.17■■□□□ 1.94
RNF216P1-213ENST00000494947 WRNQ14191 1432 aaPredicted RBP eCLIP27.14■■□□□ 1.93
RNF216P1-213ENST00000494947 GRIN2AQ12879 1464 aa27.06■■□□□ 1.92
RNF216P1-213ENST00000494947 TOP2BQ02880 1626 aa27.02■■□□□ 1.92
RNF216P1-213ENST00000494947 BIVM-ERCC5R4GMW8 1640 aa27.01■■□□□ 1.91
RNF216P1-213ENST00000494947 ERCC6L2Q5T890 1561 aa27■■□□□ 1.91
RNF216P1-213ENST00000494947 ADAMTS12P58397 1594 aa26.97■■□□□ 1.91
RNF216P1-213ENST00000494947 FHAD1B1AJZ9 1412 aa26.97■■□□□ 1.91
RNF216P1-213ENST00000494947 NUP160Q12769 1436 aa26.96■■□□□ 1.91
RNF216P1-213ENST00000494947 CEP170Q5SW79 1584 aa26.96■■□□□ 1.91
RNF216P1-213ENST00000494947 ERICH3Q5RHP9 1530 aa26.88■■□□□ 1.89
RNF216P1-213ENST00000494947 AEBP2Q6ZN18 517 aaPredicted RBP26.83■■□□□ 1.89
RNF216P1-213ENST00000494947 JPH4Q96JJ6 628 aa26.83■■□□□ 1.89
RNF216P1-213ENST00000494947 SHROOM2Q13796 1616 aa26.83■■□□□ 1.88
RNF216P1-213ENST00000494947 PRG4Q92954 1404 aaPredicted RBP26.79■■□□□ 1.88
RNF216P1-213ENST00000494947 NPM1P06748 294 aaKnown RBP eCLIP26.63■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms