RNA–Protein interactions for RNA: ENST00000639276.1

NECAP1-217, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 2,646 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-217ENST00000639276 NISCHQ9Y2I1 1504 aa19.44■□□□□ 0.7
NECAP1-217ENST00000639276 CCDC180Q9P1Z9 1646 aa16.64■□□□□ 0.25
NECAP1-217ENST00000639276 SHROOM4Q9ULL8 1493 aa16.37■□□□□ 0.21
NECAP1-217ENST00000639276 ZCCHC6Q5VYS8 1495 aaKnown RBP16.36■□□□□ 0.21
NECAP1-217ENST00000639276 DCAF8L2P0C7V8 631 aa16.28■□□□□ 0.2
NECAP1-217ENST00000639276 DCAF1Q9Y4B6 1507 aa15.91■□□□□ 0.14
NECAP1-217ENST00000639276 SUPT5HO00267 1087 aaKnown RBP15.89■□□□□ 0.13
NECAP1-217ENST00000639276 ABCC9O60706 1549 aa15.78■□□□□ 0.12
NECAP1-217ENST00000639276 SCRIBQ14160 1630 aa15.59■□□□□ 0.09
NECAP1-217ENST00000639276 MYO15BQ96JP2 1530 aa15.57■□□□□ 0.08
NECAP1-217ENST00000639276 NACADO15069 1562 aa15.48■□□□□ 0.07
NECAP1-217ENST00000639276 RB1CC1Q8TDY2 1594 aa15.31■□□□□ 0.04
NECAP1-217ENST00000639276 CHIC1Q5VXU3 224 aa15.27■□□□□ 0.04
NECAP1-217ENST00000639276 RSF1Q96T23 1441 aaPredicted RBP15.26■□□□□ 0.03
NECAP1-217ENST00000639276 CECR2Q9BXF3 1484 aa15.22■□□□□ 0.03
NECAP1-217ENST00000639276 MROH2BQ7Z745 1585 aa15.11■□□□□ 0.01
NECAP1-217ENST00000639276 UNC13AQ9UPW8 1703 aa15.1■□□□□ 0.01
NECAP1-217ENST00000639276 PABPN1Q86U42 306 aaKnown RBP eCLIP15.05■□□□□ 0
NECAP1-217ENST00000639276 WIZO95785 1651 aa15.01□□□□□ -0.01
NECAP1-217ENST00000639276 BICRAQ9NZM4 1560 aa14.94□□□□□ -0.02
NECAP1-217ENST00000639276 BAZ1AQ9NRL2 1556 aaPredicted RBP14.93□□□□□ -0.02
NECAP1-217ENST00000639276 SMARCA4P51532 1647 aa14.87□□□□□ -0.03
NECAP1-217ENST00000639276 LOC105371045A0A1W2PR82 267 aa14.84□□□□□ -0.03
NECAP1-217ENST00000639276 TRIM41Q8WV44 630 aa14.8□□□□□ -0.04
NECAP1-217ENST00000639276 TOP2AP11388 1531 aaKnown RBP14.74□□□□□ -0.05
NECAP1-217ENST00000639276 FAM9AQ8IZU1 332 aaPredicted RBP14.71□□□□□ -0.06
NECAP1-217ENST00000639276 CCDC88BA6NC98 1476 aa14.7□□□□□ -0.06
NECAP1-217ENST00000639276 SMARCA2P51531 1590 aa14.67□□□□□ -0.06
NECAP1-217ENST00000639276 EIF4G1Q04637 1599 aaKnown RBP14.63□□□□□ -0.07
NECAP1-217ENST00000639276 EHMT2Q96KQ7 1210 aa14.62□□□□□ -0.07
NECAP1-217ENST00000639276 PEG3Q9GZU2 1588 aa14.58□□□□□ -0.07
NECAP1-217ENST00000639276 ATAD2BQ9ULI0 1458 aa14.58□□□□□ -0.08
NECAP1-217ENST00000639276 ABCC8Q09428 1581 aa14.56□□□□□ -0.08
NECAP1-217ENST00000639276 BAZ1BQ9UIG0 1483 aaKnown RBP14.51□□□□□ -0.09
NECAP1-217ENST00000639276 PCGF6Q9BYE7 350 aa14.45□□□□□ -0.1
NECAP1-217ENST00000639276 SOGA1O94964 1423 aa14.37□□□□□ -0.11
NECAP1-217ENST00000639276 NCAPD3P42695 1498 aa14.35□□□□□ -0.11
NECAP1-217ENST00000639276 WRNQ14191 1432 aaPredicted RBP eCLIP14.33□□□□□ -0.12
NECAP1-217ENST00000639276 RUSC2Q8N2Y8 1516 aa14.33□□□□□ -0.12
NECAP1-217ENST00000639276 HMGXB3Q12766 1538 aa14.29□□□□□ -0.12
NECAP1-217ENST00000639276 SYNJ1O43426 1573 aa14.29□□□□□ -0.12
NECAP1-217ENST00000639276 CSRNP3Q8WYN3 585 aa14.24□□□□□ -0.13
NECAP1-217ENST00000639276 TRIM26Q12899 539 aaPredicted RBP14.21□□□□□ -0.13
NECAP1-217ENST00000639276 PPARGC1BQ86YN6 1023 aaKnown RBP14.21□□□□□ -0.13
NECAP1-217ENST00000639276 CC2D2AQ9P2K1 1620 aa14.19□□□□□ -0.14
NECAP1-217ENST00000639276 HRCP23327 699 aa14.16□□□□□ -0.14
NECAP1-217ENST00000639276 UBTFP17480 764 aaKnown RBP14.16□□□□□ -0.14
NECAP1-217ENST00000639276 EEA1Q15075 1411 aa14.15□□□□□ -0.14
NECAP1-217ENST00000639276 CFTRP13569 1480 aa14.14□□□□□ -0.15
NECAP1-217ENST00000639276 TOP2BQ02880 1626 aa14.12□□□□□ -0.15
NECAP1-217ENST00000639276 CEP162Q5TB80 1403 aa14.1□□□□□ -0.15
NECAP1-217ENST00000639276 TNIKQ9UKE5 1360 aa14.1□□□□□ -0.15
NECAP1-217ENST00000639276 CUX1P39880 1505 aa14.09□□□□□ -0.15
NECAP1-217ENST00000639276 DNAJC5BQ9UF47 199 aa14.07□□□□□ -0.16
NECAP1-217ENST00000639276 GOLGA3Q08378 1498 aa14.07□□□□□ -0.16
NECAP1-217ENST00000639276 BIVM-ERCC5R4GMW8 1640 aa14.06□□□□□ -0.16
NECAP1-217ENST00000639276 CADPSQ9ULU8 1353 aa14.06□□□□□ -0.16
NECAP1-217ENST00000639276 TTBK1Q5TCY1 1321 aaPredicted RBP14.04□□□□□ -0.16
NECAP1-217ENST00000639276 CEP164Q9UPV0 1460 aa14.02□□□□□ -0.17
NECAP1-217ENST00000639276 RANGAP1P46060 587 aaPredicted RBP14.02□□□□□ -0.17
NECAP1-217ENST00000639276 RAPGEF2Q9Y4G8 1499 aa14.01□□□□□ -0.17
NECAP1-217ENST00000639276 KIF21BO75037 1637 aa13.99□□□□□ -0.17
NECAP1-217ENST00000639276 NESP48681 1621 aa13.97□□□□□ -0.17
NECAP1-217ENST00000639276 PRDM2Q13029 1718 aa13.97□□□□□ -0.17
NECAP1-217ENST00000639276 FANCD2Q9BXW9 1451 aa13.92□□□□□ -0.18
NECAP1-217ENST00000639276 CLIP1P30622 1438 aa13.91□□□□□ -0.18
NECAP1-217ENST00000639276 KIF27Q86VH2 1401 aa13.91□□□□□ -0.18
NECAP1-217ENST00000639276 PRXQ9BXM0 1461 aa13.9□□□□□ -0.18
NECAP1-217ENST00000639276 FGD5Q6ZNL6 1462 aa13.88□□□□□ -0.19
NECAP1-217ENST00000639276 CUX2O14529 1486 aa13.87□□□□□ -0.19
NECAP1-217ENST00000639276 IGF1RP08069 1367 aa13.83□□□□□ -0.2
NECAP1-217ENST00000639276 ERICH3Q5RHP9 1530 aa13.82□□□□□ -0.2
NECAP1-217ENST00000639276 RAD54L2Q9Y4B4 1467 aa13.81□□□□□ -0.2
NECAP1-217ENST00000639276 TOPBP1Q92547 1522 aa13.79□□□□□ -0.2
NECAP1-217ENST00000639276 VPS8Q8N3P4 1428 aa13.79□□□□□ -0.2
NECAP1-217ENST00000639276 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.77□□□□□ -0.2
NECAP1-217ENST00000639276 DNMBPQ6XZF7 1577 aa13.77□□□□□ -0.2
NECAP1-217ENST00000639276 LAMC3Q9Y6N6 1575 aa13.77□□□□□ -0.2
NECAP1-217ENST00000639276 POLA1P09884 1462 aaPredicted RBP13.77□□□□□ -0.21
NECAP1-217ENST00000639276 CARMIL1Q5VZK9 1371 aa13.75□□□□□ -0.21
NECAP1-217ENST00000639276 URB2Q14146 1524 aaKnown RBP13.75□□□□□ -0.21
NECAP1-217ENST00000639276 ARAP1Q96P48 1450 aa13.74□□□□□ -0.21
NECAP1-217ENST00000639276 APLP2Q06481 763 aa13.72□□□□□ -0.21
NECAP1-217ENST00000639276 PDS5BQ9NTI5 1447 aa13.71□□□□□ -0.22
NECAP1-217ENST00000639276 ABCA10Q8WWZ4 1543 aa13.7□□□□□ -0.22
NECAP1-217ENST00000639276 KIF21AQ7Z4S6 1674 aa13.69□□□□□ -0.22
NECAP1-217ENST00000639276 ZEB1P37275 1124 aaPredicted RBP13.69□□□□□ -0.22
NECAP1-217ENST00000639276 ARHGAP35Q9NRY4 1499 aa13.68□□□□□ -0.22
NECAP1-217ENST00000639276 TDRD9Q8NDG6 1382 aaKnown RBP13.68□□□□□ -0.22
NECAP1-217ENST00000639276 CCER1Q8TC90 406 aaPredicted RBP13.67□□□□□ -0.22
NECAP1-217ENST00000639276 KANK4Q5T7N3 995 aaPredicted RBP13.67□□□□□ -0.22
NECAP1-217ENST00000639276 HNRNPUL2Q1KMD3 747 aaKnown RBP13.65□□□□□ -0.22
NECAP1-217ENST00000639276 P3H3Q8IVL6 736 aa13.64□□□□□ -0.23
NECAP1-217ENST00000639276 WDR97A6NE52 1622 aa13.59□□□□□ -0.23
NECAP1-217ENST00000639276 GAPVD1Q14C86 1478 aa13.57□□□□□ -0.24
NECAP1-217ENST00000639276 ABCA5Q8WWZ7 1642 aa13.55□□□□□ -0.24
NECAP1-217ENST00000639276 TARBP1Q13395 1621 aaKnown RBP13.54□□□□□ -0.24
NECAP1-217ENST00000639276 CUL7Q14999 1698 aa13.54□□□□□ -0.24
NECAP1-217ENST00000639276 ATP1B4Q9UN42 357 aaPredicted RBP13.53□□□□□ -0.24
NECAP1-217ENST00000639276 AQRO60306 1485 aaKnown RBP eCLIP13.52□□□□□ -0.246e-7■■■■■ 30.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms