RNA–Protein interactions for RNA: ENST00000639595.1

NECAP1-218, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 2,587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-218ENST00000639595 NISCHQ9Y2I1 1504 aa18.51■□□□□ 0.55
NECAP1-218ENST00000639595 CCDC180Q9P1Z9 1646 aa15.86■□□□□ 0.13
NECAP1-218ENST00000639595 ZCCHC6Q5VYS8 1495 aaKnown RBP15.63■□□□□ 0.09
NECAP1-218ENST00000639595 SHROOM4Q9ULL8 1493 aa15.39■□□□□ 0.05
NECAP1-218ENST00000639595 DCAF1Q9Y4B6 1507 aa15.31■□□□□ 0.04
NECAP1-218ENST00000639595 DCAF8L2P0C7V8 631 aa15.19■□□□□ 0.02
NECAP1-218ENST00000639595 SUPT5HO00267 1087 aaKnown RBP15.03■□□□□ -0
NECAP1-218ENST00000639595 MYO15BQ96JP2 1530 aa14.99□□□□□ -0.01
NECAP1-218ENST00000639595 NACADO15069 1562 aa14.74□□□□□ -0.05
NECAP1-218ENST00000639595 ABCC9O60706 1549 aa14.72□□□□□ -0.05
NECAP1-218ENST00000639595 SCRIBQ14160 1630 aa14.67□□□□□ -0.06
NECAP1-218ENST00000639595 CHIC1Q5VXU3 224 aa14.64□□□□□ -0.07
NECAP1-218ENST00000639595 RSF1Q96T23 1441 aaPredicted RBP14.56□□□□□ -0.08
NECAP1-218ENST00000639595 RB1CC1Q8TDY2 1594 aa14.49□□□□□ -0.09
NECAP1-218ENST00000639595 CECR2Q9BXF3 1484 aa14.38□□□□□ -0.11
NECAP1-218ENST00000639595 MROH2BQ7Z745 1585 aa14.32□□□□□ -0.12
NECAP1-218ENST00000639595 BAZ1AQ9NRL2 1556 aaPredicted RBP14.23□□□□□ -0.13
NECAP1-218ENST00000639595 WIZO95785 1651 aa14.18□□□□□ -0.14
NECAP1-218ENST00000639595 UNC13AQ9UPW8 1703 aa14.16□□□□□ -0.14
NECAP1-218ENST00000639595 TRIM41Q8WV44 630 aa14.11□□□□□ -0.15
NECAP1-218ENST00000639595 SMARCA4P51532 1647 aa14.1□□□□□ -0.15
NECAP1-218ENST00000639595 LOC105371045A0A1W2PR82 267 aa14.1□□□□□ -0.15
NECAP1-218ENST00000639595 BICRAQ9NZM4 1560 aa14.09□□□□□ -0.15
NECAP1-218ENST00000639595 TOP2AP11388 1531 aaKnown RBP14.05□□□□□ -0.16
NECAP1-218ENST00000639595 PABPN1Q86U42 306 aaKnown RBP eCLIP14.02□□□□□ -0.17
NECAP1-218ENST00000639595 EIF4G1Q04637 1599 aaKnown RBP13.98□□□□□ -0.17
NECAP1-218ENST00000639595 CCDC88BA6NC98 1476 aa13.97□□□□□ -0.17
NECAP1-218ENST00000639595 PEG3Q9GZU2 1588 aa13.95□□□□□ -0.18
NECAP1-218ENST00000639595 SMARCA2P51531 1590 aa13.94□□□□□ -0.18
NECAP1-218ENST00000639595 FAM9AQ8IZU1 332 aaPredicted RBP13.85□□□□□ -0.19
NECAP1-218ENST00000639595 PCGF6Q9BYE7 350 aa13.85□□□□□ -0.19
NECAP1-218ENST00000639595 ATAD2BQ9ULI0 1458 aa13.83□□□□□ -0.2
NECAP1-218ENST00000639595 HRCP23327 699 aa13.79□□□□□ -0.2
NECAP1-218ENST00000639595 TRIM26Q12899 539 aaPredicted RBP13.76□□□□□ -0.21
NECAP1-218ENST00000639595 ABCC8Q09428 1581 aa13.76□□□□□ -0.21
NECAP1-218ENST00000639595 BAZ1BQ9UIG0 1483 aaKnown RBP13.74□□□□□ -0.21
NECAP1-218ENST00000639595 EEA1Q15075 1411 aa13.68□□□□□ -0.22
NECAP1-218ENST00000639595 WRNQ14191 1432 aaPredicted RBP eCLIP13.66□□□□□ -0.22
NECAP1-218ENST00000639595 NCAPD3P42695 1498 aa13.66□□□□□ -0.22
NECAP1-218ENST00000639595 SOGA1O94964 1423 aa13.64□□□□□ -0.23
NECAP1-218ENST00000639595 EHMT2Q96KQ7 1210 aa13.62□□□□□ -0.23
NECAP1-218ENST00000639595 HMGXB3Q12766 1538 aa13.62□□□□□ -0.23
NECAP1-218ENST00000639595 CSRNP3Q8WYN3 585 aa13.61□□□□□ -0.23
NECAP1-218ENST00000639595 TNIKQ9UKE5 1360 aa13.57□□□□□ -0.24
NECAP1-218ENST00000639595 RUSC2Q8N2Y8 1516 aa13.56□□□□□ -0.24
NECAP1-218ENST00000639595 SYNJ1O43426 1573 aa13.55□□□□□ -0.24
NECAP1-218ENST00000639595 AEBP2Q6ZN18 517 aaPredicted RBP13.51□□□□□ -0.25
NECAP1-218ENST00000639595 CEP162Q5TB80 1403 aa13.49□□□□□ -0.25
NECAP1-218ENST00000639595 GOLGA3Q08378 1498 aa13.48□□□□□ -0.25
NECAP1-218ENST00000639595 TOP2BQ02880 1626 aa13.47□□□□□ -0.25
NECAP1-218ENST00000639595 CFTRP13569 1480 aa13.46□□□□□ -0.25
NECAP1-218ENST00000639595 CEP164Q9UPV0 1460 aa13.45□□□□□ -0.26
NECAP1-218ENST00000639595 UBTFP17480 764 aaKnown RBP13.44□□□□□ -0.26
NECAP1-218ENST00000639595 KIF21BO75037 1637 aa13.43□□□□□ -0.26
NECAP1-218ENST00000639595 BIVM-ERCC5R4GMW8 1640 aa13.41□□□□□ -0.26
NECAP1-218ENST00000639595 ZEB1P37275 1124 aaPredicted RBP13.41□□□□□ -0.26
NECAP1-218ENST00000639595 PPARGC1BQ86YN6 1023 aaKnown RBP13.4□□□□□ -0.26
NECAP1-218ENST00000639595 CUX1P39880 1505 aa13.35□□□□□ -0.27
NECAP1-218ENST00000639595 CADPSQ9ULU8 1353 aa13.34□□□□□ -0.27
NECAP1-218ENST00000639595 RAPGEF2Q9Y4G8 1499 aa13.33□□□□□ -0.28
NECAP1-218ENST00000639595 PRXQ9BXM0 1461 aa13.32□□□□□ -0.28
NECAP1-218ENST00000639595 CLIP1P30622 1438 aa13.3□□□□□ -0.28
NECAP1-218ENST00000639595 CC2D2AQ9P2K1 1620 aa13.3□□□□□ -0.28
NECAP1-218ENST00000639595 ERICH3Q5RHP9 1530 aa13.28□□□□□ -0.28
NECAP1-218ENST00000639595 KIF27Q86VH2 1401 aa13.28□□□□□ -0.28
NECAP1-218ENST00000639595 PRDM2Q13029 1718 aa13.25□□□□□ -0.29
NECAP1-218ENST00000639595 VPS8Q8N3P4 1428 aa13.25□□□□□ -0.29
NECAP1-218ENST00000639595 IGF1RP08069 1367 aa13.17□□□□□ -0.3
NECAP1-218ENST00000639595 FANCD2Q9BXW9 1451 aa13.16□□□□□ -0.3
NECAP1-218ENST00000639595 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.14□□□□□ -0.31
NECAP1-218ENST00000639595 TTBK1Q5TCY1 1321 aaPredicted RBP13.14□□□□□ -0.31
NECAP1-218ENST00000639595 CUX2O14529 1486 aa13.14□□□□□ -0.31
NECAP1-218ENST00000639595 FGD5Q6ZNL6 1462 aa13.14□□□□□ -0.31
NECAP1-218ENST00000639595 SLC24A1O60721 1099 aa13.13□□□□□ -0.31
NECAP1-218ENST00000639595 CCER1Q8TC90 406 aaPredicted RBP13.12□□□□□ -0.31
NECAP1-218ENST00000639595 APLP2Q06481 763 aa13.12□□□□□ -0.31
NECAP1-218ENST00000639595 ARAP1Q96P48 1450 aa13.11□□□□□ -0.31
NECAP1-218ENST00000639595 CARMIL1Q5VZK9 1371 aa13.09□□□□□ -0.31
NECAP1-218ENST00000639595 DNMBPQ6XZF7 1577 aa13.08□□□□□ -0.32
NECAP1-218ENST00000639595 RANGAP1P46060 587 aaPredicted RBP13.08□□□□□ -0.32
NECAP1-218ENST00000639595 NESP48681 1621 aa13.06□□□□□ -0.32
NECAP1-218ENST00000639595 LAMC3Q9Y6N6 1575 aa13.06□□□□□ -0.32
NECAP1-218ENST00000639595 TOPBP1Q92547 1522 aa13.06□□□□□ -0.32
NECAP1-218ENST00000639595 ARHGAP35Q9NRY4 1499 aa13.05□□□□□ -0.32
NECAP1-218ENST00000639595 ABCA10Q8WWZ4 1543 aa13.05□□□□□ -0.32
NECAP1-218ENST00000639595 POLA1P09884 1462 aaPredicted RBP13.03□□□□□ -0.32
NECAP1-218ENST00000639595 RAD54L2Q9Y4B4 1467 aa13□□□□□ -0.33
NECAP1-218ENST00000639595 PDS5BQ9NTI5 1447 aa12.99□□□□□ -0.33
NECAP1-218ENST00000639595 KANK4Q5T7N3 995 aaPredicted RBP12.98□□□□□ -0.33
NECAP1-218ENST00000639595 URB2Q14146 1524 aaKnown RBP12.97□□□□□ -0.33
NECAP1-218ENST00000639595 DNAJC5BQ9UF47 199 aa12.97□□□□□ -0.33
NECAP1-218ENST00000639595 HNRNPUL2Q1KMD3 747 aaKnown RBP12.96□□□□□ -0.33
NECAP1-218ENST00000639595 MAP3K1Q13233 1512 aa12.95□□□□□ -0.34
NECAP1-218ENST00000639595 RRBP1Q9P2E9 1410 aaKnown RBP12.93□□□□□ -0.34
NECAP1-218ENST00000639595 CUL7Q14999 1698 aa12.91□□□□□ -0.34
NECAP1-218ENST00000639595 FHAD1B1AJZ9 1412 aa12.9□□□□□ -0.34
NECAP1-218ENST00000639595 WDR97A6NE52 1622 aa12.89□□□□□ -0.35
NECAP1-218ENST00000639595 ABCA5Q8WWZ7 1642 aa12.86□□□□□ -0.35
NECAP1-218ENST00000639595 TDRD9Q8NDG6 1382 aaKnown RBP12.86□□□□□ -0.35
NECAP1-218ENST00000639595 TIAM1Q13009 1591 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms