RNA–Protein interactions for RNA: ENST00000533772.5

CHORDC1-211, Transcript of cysteine and histidine rich domain containing 1, humanhuman

TSL 5

Gene CHORDC1, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHORDC1-211ENST00000533772 NISCHQ9Y2I1 1504 aa18.64■□□□□ 0.57
CHORDC1-211ENST00000533772 ABCC9O60706 1549 aa17.76■□□□□ 0.43
CHORDC1-211ENST00000533772 DNAJC5BQ9UF47 199 aa17.3■□□□□ 0.36
CHORDC1-211ENST00000533772 CCDC180Q9P1Z9 1646 aa17.26■□□□□ 0.35
CHORDC1-211ENST00000533772 RB1CC1Q8TDY2 1594 aa16.63■□□□□ 0.25
CHORDC1-211ENST00000533772 UNC13AQ9UPW8 1703 aa16.55■□□□□ 0.24
CHORDC1-211ENST00000533772 DNAJC5Q9H3Z4 198 aa16.36■□□□□ 0.21
CHORDC1-211ENST00000533772 BICRAQ9NZM4 1560 aa16.34■□□□□ 0.21
CHORDC1-211ENST00000533772 NACADO15069 1562 aa16.32■□□□□ 0.2
CHORDC1-211ENST00000533772 PABPN1Q86U42 306 aaKnown RBP eCLIP16.21■□□□□ 0.19
CHORDC1-211ENST00000533772 CC2D2AQ9P2K1 1620 aa16.13■□□□□ 0.17
CHORDC1-211ENST00000533772 CECR2Q9BXF3 1484 aa16.07■□□□□ 0.16
CHORDC1-211ENST00000533772 SHROOM4Q9ULL8 1493 aa15.96■□□□□ 0.14
CHORDC1-211ENST00000533772 EIF4G1Q04637 1599 aaKnown RBP15.91■□□□□ 0.14
CHORDC1-211ENST00000533772 MYO15BQ96JP2 1530 aa15.9■□□□□ 0.14
CHORDC1-211ENST00000533772 AEBP2Q6ZN18 517 aaPredicted RBP15.86■□□□□ 0.13
CHORDC1-211ENST00000533772 CUX2O14529 1486 aa15.67■□□□□ 0.1
CHORDC1-211ENST00000533772 SCRIBQ14160 1630 aa15.55■□□□□ 0.08
CHORDC1-211ENST00000533772 DCAF8L2P0C7V8 631 aa15.53■□□□□ 0.08
CHORDC1-211ENST00000533772 DCAF1Q9Y4B6 1507 aa15.41■□□□□ 0.06
CHORDC1-211ENST00000533772 ZCCHC6Q5VYS8 1495 aaKnown RBP15.37■□□□□ 0.05
CHORDC1-211ENST00000533772 ERCC6Q03468 1493 aa15.3■□□□□ 0.04
CHORDC1-211ENST00000533772 THOC2Q8NI27 1593 aaKnown RBP15.3■□□□□ 0.04
CHORDC1-211ENST00000533772 TRIM41Q8WV44 630 aa15.2■□□□□ 0.02
CHORDC1-211ENST00000533772 NESP48681 1621 aa15.1■□□□□ 0.01
CHORDC1-211ENST00000533772 KIF21AQ7Z4S6 1674 aa15.05■□□□□ -0
CHORDC1-211ENST00000533772 NCAPD3P42695 1498 aa15.02■□□□□ -0
CHORDC1-211ENST00000533772 SMARCA2P51531 1590 aa14.98□□□□□ -0.01
CHORDC1-211ENST00000533772 HMGXB3Q12766 1538 aa14.98□□□□□ -0.01
CHORDC1-211ENST00000533772 BAZ1AQ9NRL2 1556 aaPredicted RBP14.96□□□□□ -0.01
CHORDC1-211ENST00000533772 LAMC3Q9Y6N6 1575 aa14.9□□□□□ -0.02
CHORDC1-211ENST00000533772 ATAD2BQ9ULI0 1458 aa14.89□□□□□ -0.03
CHORDC1-211ENST00000533772 RIMBP3CA6NJZ7 1639 aa14.82□□□□□ -0.04
CHORDC1-211ENST00000533772 RIMBP3BA6NNM3 1639 aa14.82□□□□□ -0.04
CHORDC1-211ENST00000533772 RIMBP3Q9UFD9 1639 aa14.82□□□□□ -0.04
CHORDC1-211ENST00000533772 WDR62O43379 1518 aa14.81□□□□□ -0.04
CHORDC1-211ENST00000533772 SMARCA4P51532 1647 aa14.81□□□□□ -0.04
CHORDC1-211ENST00000533772 CHIC1Q5VXU3 224 aa14.8□□□□□ -0.04
CHORDC1-211ENST00000533772 PEG3Q9GZU2 1588 aa14.71□□□□□ -0.05
CHORDC1-211ENST00000533772 MRC2Q9UBG0 1479 aa14.7□□□□□ -0.06
CHORDC1-211ENST00000533772 BAZ1BQ9UIG0 1483 aaKnown RBP14.67□□□□□ -0.06
CHORDC1-211ENST00000533772 ARHGEF11O15085 1522 aa14.63□□□□□ -0.07
CHORDC1-211ENST00000533772 PDS5BQ9NTI5 1447 aa14.63□□□□□ -0.07
CHORDC1-211ENST00000533772 OSCARQ8IYS5 282 aa14.51□□□□□ -0.09
CHORDC1-211ENST00000533772 ARAP1Q96P48 1450 aa14.46□□□□□ -0.09
CHORDC1-211ENST00000533772 CEP164Q9UPV0 1460 aa14.45□□□□□ -0.1
CHORDC1-211ENST00000533772 CADPSQ9ULU8 1353 aa14.43□□□□□ -0.1
CHORDC1-211ENST00000533772 CHD1O14646 1710 aa14.39□□□□□ -0.11
CHORDC1-211ENST00000533772 URB2Q14146 1524 aaKnown RBP14.39□□□□□ -0.11
CHORDC1-211ENST00000533772 MROH2BQ7Z745 1585 aa14.38□□□□□ -0.11
CHORDC1-211ENST00000533772 FANCD2Q9BXW9 1451 aa14.36□□□□□ -0.11
CHORDC1-211ENST00000533772 EIF4G3O43432 1585 aaKnown RBP14.32□□□□□ -0.12
CHORDC1-211ENST00000533772 PRDM2Q13029 1718 aa14.31□□□□□ -0.12
CHORDC1-211ENST00000533772 ZNF608Q9ULD9 1512 aaPredicted RBP14.31□□□□□ -0.12
CHORDC1-211ENST00000533772 TRHP20396 242 aaPredicted RBP14.24□□□□□ -0.13
CHORDC1-211ENST00000533772 CYB5RLQ6IPT4 315 aa14.23□□□□□ -0.13
CHORDC1-211ENST00000533772 RSF1Q96T23 1441 aaPredicted RBP14.23□□□□□ -0.13
CHORDC1-211ENST00000533772 CFTRP13569 1480 aa14.22□□□□□ -0.13
CHORDC1-211ENST00000533772 WIZO95785 1651 aa14.21□□□□□ -0.13
CHORDC1-211ENST00000533772 IFT140Q96RY7 1462 aa14.18□□□□□ -0.14
CHORDC1-211ENST00000533772 CLASP1Q7Z460 1538 aa14.17□□□□□ -0.14
CHORDC1-211ENST00000533772 TARBP1Q13395 1621 aaKnown RBP14.12□□□□□ -0.15
CHORDC1-211ENST00000533772 ILDR1Q86SU0 546 aaPredicted RBP14.08□□□□□ -0.16
CHORDC1-211ENST00000533772 TOPBP1Q92547 1522 aa14.05□□□□□ -0.16
CHORDC1-211ENST00000533772 KIF13AQ9H1H9 1805 aa14.05□□□□□ -0.16
CHORDC1-211ENST00000533772 DNMBPQ6XZF7 1577 aa13.98□□□□□ -0.17
CHORDC1-211ENST00000533772 TOP2AP11388 1531 aaKnown RBP13.96□□□□□ -0.17
CHORDC1-211ENST00000533772 AQRO60306 1485 aaKnown RBP eCLIP13.95□□□□□ -0.187e-7■■□□□ 13.9
CHORDC1-211ENST00000533772 SYNJ1O43426 1573 aa13.94□□□□□ -0.18
CHORDC1-211ENST00000533772 GAPVD1Q14C86 1478 aa13.89□□□□□ -0.19
CHORDC1-211ENST00000533772 SNAPC4Q5SXM2 1469 aa13.88□□□□□ -0.19
CHORDC1-211ENST00000533772 WDR97A6NE52 1622 aa13.88□□□□□ -0.19
CHORDC1-211ENST00000533772 ERCC6L2Q5T890 1561 aa13.87□□□□□ -0.19
CHORDC1-211ENST00000533772 POLA1P09884 1462 aaPredicted RBP13.87□□□□□ -0.19
CHORDC1-211ENST00000533772 ABCC8Q09428 1581 aa13.83□□□□□ -0.19
CHORDC1-211ENST00000533772 PBRM1Q86U86 1689 aa13.82□□□□□ -0.2
CHORDC1-211ENST00000533772 MAGI1Q96QZ7 1491 aaPredicted RBP13.8□□□□□ -0.2
CHORDC1-211ENST00000533772 SYNJ2O15056 1496 aa13.76□□□□□ -0.21
CHORDC1-211ENST00000533772 RAD54L2Q9Y4B4 1467 aa13.76□□□□□ -0.21
CHORDC1-211ENST00000533772 KDM4FA0A1W2PPD8 638 aa13.76□□□□□ -0.21
CHORDC1-211ENST00000533772 FBLN2P98095 1184 aa13.75□□□□□ -0.21
CHORDC1-211ENST00000533772 SHROOM2Q13796 1616 aa13.75□□□□□ -0.21
CHORDC1-211ENST00000533772 HECW2Q9P2P5 1572 aa13.75□□□□□ -0.21
CHORDC1-211ENST00000533772 DIP2BQ9P265 1576 aa13.73□□□□□ -0.21
CHORDC1-211ENST00000533772 KDM6BO15054 1643 aa13.72□□□□□ -0.21
CHORDC1-211ENST00000533772 CEP170Q5SW79 1584 aa13.71□□□□□ -0.22
CHORDC1-211ENST00000533772 TDRD9Q8NDG6 1382 aaKnown RBP13.69□□□□□ -0.22
CHORDC1-211ENST00000533772 CCDC88BA6NC98 1476 aa13.68□□□□□ -0.22
CHORDC1-211ENST00000533772 ABCA5Q8WWZ7 1642 aa13.67□□□□□ -0.22
CHORDC1-211ENST00000533772 GRIN2BQ13224 1484 aa13.67□□□□□ -0.22
CHORDC1-211ENST00000533772 FGD5Q6ZNL6 1462 aa13.65□□□□□ -0.22
CHORDC1-211ENST00000533772 MAPKBP1O60336 1514 aa13.63□□□□□ -0.23
CHORDC1-211ENST00000533772 ABCC10Q5T3U5 1492 aa13.62□□□□□ -0.23
CHORDC1-211ENST00000533772 SENP3Q9H4L4 574 aaPredicted RBP13.62□□□□□ -0.23
CHORDC1-211ENST00000533772 ADGRL1O94910 1474 aa13.61□□□□□ -0.23
CHORDC1-211ENST00000533772 SOGA1O94964 1423 aa13.6□□□□□ -0.23
CHORDC1-211ENST00000533772 TSPOAP1O95153 1857 aa13.59□□□□□ -0.23
CHORDC1-211ENST00000533772 ADAMTS12P58397 1594 aa13.59□□□□□ -0.23
CHORDC1-211ENST00000533772 PPRC1Q5VV67 1664 aaKnown RBP13.58□□□□□ -0.24
CHORDC1-211ENST00000533772 CUX1P39880 1505 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 163.8 ms