RNA–Protein interactions for RNA: ENST00000406608.2

RNF216P1-206, Transcript of ring finger protein 216 pseudogene 1, humanhuman

TSL 4

Gene RNF216P1, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216P1-206ENST00000406608 AEBP2Q6ZN18 517 aaPredicted RBP23.21■■□□□ 1.31
RNF216P1-206ENST00000406608 CHIC1Q5VXU3 224 aa22.04■■□□□ 1.12
RNF216P1-206ENST00000406608 SENP3Q9H4L4 574 aaPredicted RBP19.77■□□□□ 0.76
RNF216P1-206ENST00000406608 PHF23Q9BUL5 403 aaPredicted RBP19.52■□□□□ 0.72
RNF216P1-206ENST00000406608 FOXD1Q16676 465 aa18.44■□□□□ 0.54
RNF216P1-206ENST00000406608 PLPPR3Q6T4P5 718 aa17.6■□□□□ 0.41
RNF216P1-206ENST00000406608 PPP6R1Q9UPN7 881 aa17.25■□□□□ 0.35
RNF216P1-206ENST00000406608 MSH5O43196 834 aa17.23■□□□□ 0.35
RNF216P1-206ENST00000406608 PIAS4Q8N2W9 510 aaPredicted RBP17.22■□□□□ 0.35
RNF216P1-206ENST00000406608 ADRA2BP18089 450 aa17.19■□□□□ 0.34
RNF216P1-206ENST00000406608 POTEDQ86YR6 584 aa16.82■□□□□ 0.28
RNF216P1-206ENST00000406608 MAPK8IP2Q13387 824 aaPredicted RBP15.79■□□□□ 0.12
RNF216P1-206ENST00000406608 SCAF1Q9H7N4 1312 aaKnown RBP15.69■□□□□ 0.1
RNF216P1-206ENST00000406608 DMRT2Q9Y5R5 561 aa15.69■□□□□ 0.1
RNF216P1-206ENST00000406608 PPP4R3CPQ6ZMV5 832 aa15.43■□□□□ 0.06
RNF216P1-206ENST00000406608 CNKSR2Q8WXI2 1034 aa15.13■□□□□ 0.01
RNF216P1-206ENST00000406608 HOXD11P31277 338 aaPredicted RBP15.12■□□□□ 0.01
RNF216P1-206ENST00000406608 DCAF8L1A6NGE4 600 aa15.01□□□□□ -0.01
RNF216P1-206ENST00000406608 RNF216Q9NWF9 866 aaPredicted RBP15□□□□□ -0.01
RNF216P1-206ENST00000406608 NCBP3Q53F19 620 aaKnown RBP14.81□□□□□ -0.04
RNF216P1-206ENST00000406608 CACNB1Q02641 598 aaPredicted RBP14.77□□□□□ -0.05
RNF216P1-206ENST00000406608 RNF39Q9H2S5 420 aa14.72□□□□□ -0.05
RNF216P1-206ENST00000406608 NPM3O75607 178 aaKnown RBP14.64□□□□□ -0.07
RNF216P1-206ENST00000406608 DNAJC5BQ9UF47 199 aa14.59□□□□□ -0.07
RNF216P1-206ENST00000406608 C1QBPQ07021 282 aaKnown RBP14.49□□□□□ -0.09
RNF216P1-206ENST00000406608 KCNA4P22459 653 aa14.37□□□□□ -0.11
RNF216P1-206ENST00000406608 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.37□□□□□ -0.11
RNF216P1-206ENST00000406608 U3KPZ7 1027 aaPredicted RBP14.11□□□□□ -0.15
RNF216P1-206ENST00000406608 SLC4A2P04920 1241 aa13.99□□□□□ -0.17
RNF216P1-206ENST00000406608 SPINK5Q9NQ38 1064 aaPredicted RBP13.9□□□□□ -0.18
RNF216P1-206ENST00000406608 CAPN15O75808 1086 aa13.85□□□□□ -0.19
RNF216P1-206ENST00000406608 DSG3P32926 999 aa13.79□□□□□ -0.2
RNF216P1-206ENST00000406608 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.67□□□□□ -0.22
RNF216P1-206ENST00000406608 APLP2Q06481 763 aa13.67□□□□□ -0.22
RNF216P1-206ENST00000406608 HNRNPUL2Q1KMD3 747 aaKnown RBP13.67□□□□□ -0.22
RNF216P1-206ENST00000406608 TRHP20396 242 aaPredicted RBP13.63□□□□□ -0.23
RNF216P1-206ENST00000406608 SAMD1Q6SPF0 538 aaPredicted RBP13.61□□□□□ -0.23
RNF216P1-206ENST00000406608 ZNF219Q9P2Y4 722 aaPredicted RBP13.61□□□□□ -0.23
RNF216P1-206ENST00000406608 SLC4A1APQ9BWU0 796 aaKnown RBP13.55□□□□□ -0.24
RNF216P1-206ENST00000406608 ABCB7O75027 752 aa13.54□□□□□ -0.24
RNF216P1-206ENST00000406608 MYCNP04198 464 aaPredicted RBP13.53□□□□□ -0.24
RNF216P1-206ENST00000406608 FOXD4L1Q9NU39 408 aa13.4□□□□□ -0.26
RNF216P1-206ENST00000406608 POLA2Q14181 598 aa13.27□□□□□ -0.29
RNF216P1-206ENST00000406608 ZBTB22O15209 634 aa13.23□□□□□ -0.29
RNF216P1-206ENST00000406608 ATF5Q9Y2D1 282 aaPredicted RBP13.23□□□□□ -0.29
RNF216P1-206ENST00000406608 POTEHQ6S545 545 aa13.17□□□□□ -0.3
RNF216P1-206ENST00000406608 RBM42Q9BTD8 480 aaKnown RBP13.14□□□□□ -0.31
RNF216P1-206ENST00000406608 ZBTB12Q9Y330 459 aaPredicted RBP13□□□□□ -0.33
RNF216P1-206ENST00000406608 ATXN8OSP0DMR3 200 aa12.97□□□□□ -0.33
RNF216P1-206ENST00000406608 DNAJC5Q9H3Z4 198 aa12.96□□□□□ -0.33
RNF216P1-206ENST00000406608 OSCARQ8IYS5 282 aa12.87□□□□□ -0.35
RNF216P1-206ENST00000406608 ABCC9O60706 1549 aa12.87□□□□□ -0.35
RNF216P1-206ENST00000406608 CHRDL2Q6WN34 429 aa12.86□□□□□ -0.35
RNF216P1-206ENST00000406608 AKT1S1Q96B36 256 aa12.84□□□□□ -0.35
RNF216P1-206ENST00000406608 REM2Q8IYK8 340 aaPredicted RBP12.73□□□□□ -0.37
RNF216P1-206ENST00000406608 NISCHQ9Y2I1 1504 aa12.7□□□□□ -0.38
RNF216P1-206ENST00000406608 FBLN2P98095 1184 aa12.68□□□□□ -0.38
RNF216P1-206ENST00000406608 MKRN4PQ13434 485 aaPredicted RBP12.63□□□□□ -0.39
RNF216P1-206ENST00000406608 SPDYE2BA6NHP3 402 aa12.61□□□□□ -0.39
RNF216P1-206ENST00000406608 SPDYE6P0CI01 402 aa12.61□□□□□ -0.39
RNF216P1-206ENST00000406608 SPDYE2Q495Y8 402 aa12.61□□□□□ -0.39
RNF216P1-206ENST00000406608 CSRNP3Q8WYN3 585 aa12.61□□□□□ -0.39
RNF216P1-206ENST00000406608 PITPNM1O00562 1244 aa12.6□□□□□ -0.39
RNF216P1-206ENST00000406608 PIP4P2Q8N4L2 257 aa12.56□□□□□ -0.4
RNF216P1-206ENST00000406608 FXR2P51116 673 aaKnown RBP eCLIP12.49□□□□□ -0.41
RNF216P1-206ENST00000406608 SSUH2Q9Y2M2 353 aa12.46□□□□□ -0.41
RNF216P1-206ENST00000406608 ZNF692Q9BU19 519 aaPredicted RBP12.45□□□□□ -0.42
RNF216P1-206ENST00000406608 EHMT2Q96KQ7 1210 aa12.44□□□□□ -0.42
RNF216P1-206ENST00000406608 SPDYE1Q8NFV5 336 aaPredicted RBP12.38□□□□□ -0.43
RNF216P1-206ENST00000406608 SP7Q8TDD2 431 aaPredicted RBP12.36□□□□□ -0.43
RNF216P1-206ENST00000406608 CLEC11AQ9Y240 323 aa12.35□□□□□ -0.43
RNF216P1-206ENST00000406608 HAX1O00165 279 aa12.31□□□□□ -0.44
RNF216P1-206ENST00000406608 PABPN1Q86U42 306 aaKnown RBP eCLIP12.28□□□□□ -0.44
RNF216P1-206ENST00000406608 PRKAR2AP13861 404 aaKnown RBP12.26□□□□□ -0.45
RNF216P1-206ENST00000406608 EVX2Q03828 476 aa12.19□□□□□ -0.46
RNF216P1-206ENST00000406608 PRR29P0C7W0 189 aa12.15□□□□□ -0.46
RNF216P1-206ENST00000406608 CHADLQ6NUI6 762 aa12.14□□□□□ -0.47
RNF216P1-206ENST00000406608 C19orf67A6NJJ6 358 aa12.09□□□□□ -0.47
RNF216P1-206ENST00000406608 SPDYE4A6NLX3 237 aa12.01□□□□□ -0.49
RNF216P1-206ENST00000406608 FARP1Q9Y4F1 1045 aaPredicted RBP11.95□□□□□ -0.5
RNF216P1-206ENST00000406608 STAG3Q9UJ98 1225 aa11.92□□□□□ -0.5
RNF216P1-206ENST00000406608 GABBR2O75899 941 aa11.9□□□□□ -0.5
RNF216P1-206ENST00000406608 CD44P16070 742 aaKnown RBP11.88□□□□□ -0.51
RNF216P1-206ENST00000406608 CREBZFQ9NS37 354 aa11.88□□□□□ -0.51
RNF216P1-206ENST00000406608 CCDC180Q9P1Z9 1646 aa11.81□□□□□ -0.52
RNF216P1-206ENST00000406608 RB1CC1Q8TDY2 1594 aa11.8□□□□□ -0.52
RNF216P1-206ENST00000406608 CECR2Q9BXF3 1484 aa11.77□□□□□ -0.52
RNF216P1-206ENST00000406608 PROM2Q8N271 834 aa11.75□□□□□ -0.53
RNF216P1-206ENST00000406608 SLC24A1O60721 1099 aa11.74□□□□□ -0.53
RNF216P1-206ENST00000406608 TRIM41Q8WV44 630 aa11.74□□□□□ -0.53
RNF216P1-206ENST00000406608 ZNF579Q8NAF0 562 aaKnown RBP11.71□□□□□ -0.53
RNF216P1-206ENST00000406608 ZRANB1Q9UGI0 708 aa11.7□□□□□ -0.54
RNF216P1-206ENST00000406608 CLCN6P51797 869 aa11.69□□□□□ -0.54
RNF216P1-206ENST00000406608 MNX1P50219 401 aaPredicted RBP11.68□□□□□ -0.54
RNF216P1-206ENST00000406608 POTEIP0CG38 1075 aa11.67□□□□□ -0.54
RNF216P1-206ENST00000406608 CUX2O14529 1486 aa11.67□□□□□ -0.54
RNF216P1-206ENST00000406608 NPM1P06748 294 aaKnown RBP eCLIP11.63□□□□□ -0.55
RNF216P1-206ENST00000406608 PAK3O75914 559 aaPredicted RBP11.59□□□□□ -0.55
RNF216P1-206ENST00000406608 LHX8Q68G74 356 aa11.58□□□□□ -0.56
RNF216P1-206ENST00000406608 CC2D2AQ9P2K1 1620 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms