RNA–Protein interactions for RNA: ENST00000639811.1

NECAP1-219, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5 BASIC

Gene NECAP1, Length 2,175 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-219ENST00000639811 NISCHQ9Y2I1 1504 aa21.6■■□□□ 1.05
NECAP1-219ENST00000639811 CCDC180Q9P1Z9 1646 aa18.63■□□□□ 0.57
NECAP1-219ENST00000639811 ZCCHC6Q5VYS8 1495 aaKnown RBP18.2■□□□□ 0.5
NECAP1-219ENST00000639811 SHROOM4Q9ULL8 1493 aa17.94■□□□□ 0.46
NECAP1-219ENST00000639811 DCAF8L2P0C7V8 631 aa17.82■□□□□ 0.44
NECAP1-219ENST00000639811 DCAF1Q9Y4B6 1507 aa17.8■□□□□ 0.44
NECAP1-219ENST00000639811 ABCC9O60706 1549 aa17.46■□□□□ 0.39
NECAP1-219ENST00000639811 MYO15BQ96JP2 1530 aa17.46■□□□□ 0.39
NECAP1-219ENST00000639811 SUPT5HO00267 1087 aaKnown RBP17.39■□□□□ 0.37
NECAP1-219ENST00000639811 NACADO15069 1562 aa17.29■□□□□ 0.36
NECAP1-219ENST00000639811 SCRIBQ14160 1630 aa17.28■□□□□ 0.36
NECAP1-219ENST00000639811 RB1CC1Q8TDY2 1594 aa17.07■□□□□ 0.32
NECAP1-219ENST00000639811 RSF1Q96T23 1441 aaPredicted RBP16.9■□□□□ 0.3
NECAP1-219ENST00000639811 CECR2Q9BXF3 1484 aa16.83■□□□□ 0.28
NECAP1-219ENST00000639811 UNC13AQ9UPW8 1703 aa16.81■□□□□ 0.28
NECAP1-219ENST00000639811 CHIC1Q5VXU3 224 aa16.79■□□□□ 0.28
NECAP1-219ENST00000639811 MROH2BQ7Z745 1585 aa16.75■□□□□ 0.27
NECAP1-219ENST00000639811 BICRAQ9NZM4 1560 aa16.63■□□□□ 0.25
NECAP1-219ENST00000639811 WIZO95785 1651 aa16.63■□□□□ 0.25
NECAP1-219ENST00000639811 BAZ1AQ9NRL2 1556 aaPredicted RBP16.62■□□□□ 0.25
NECAP1-219ENST00000639811 PABPN1Q86U42 306 aaKnown RBP eCLIP16.57■□□□□ 0.24
NECAP1-219ENST00000639811 SMARCA4P51532 1647 aa16.54■□□□□ 0.24
NECAP1-219ENST00000639811 TOP2AP11388 1531 aaKnown RBP16.4■□□□□ 0.22
NECAP1-219ENST00000639811 SMARCA2P51531 1590 aa16.29■□□□□ 0.2
NECAP1-219ENST00000639811 EIF4G1Q04637 1599 aaKnown RBP16.29■□□□□ 0.2
NECAP1-219ENST00000639811 PEG3Q9GZU2 1588 aa16.29■□□□□ 0.2
NECAP1-219ENST00000639811 CCDC88BA6NC98 1476 aa16.29■□□□□ 0.2
NECAP1-219ENST00000639811 TRIM41Q8WV44 630 aa16.27■□□□□ 0.2
NECAP1-219ENST00000639811 LOC105371045A0A1W2PR82 267 aa16.21■□□□□ 0.19
NECAP1-219ENST00000639811 ATAD2BQ9ULI0 1458 aa16.2■□□□□ 0.18
NECAP1-219ENST00000639811 BAZ1BQ9UIG0 1483 aaKnown RBP16.11■□□□□ 0.17
NECAP1-219ENST00000639811 ABCC8Q09428 1581 aa16.07■□□□□ 0.16
NECAP1-219ENST00000639811 FAM9AQ8IZU1 332 aaPredicted RBP16.06■□□□□ 0.16
NECAP1-219ENST00000639811 NCAPD3P42695 1498 aa15.99■□□□□ 0.15
NECAP1-219ENST00000639811 HMGXB3Q12766 1538 aa15.97■□□□□ 0.15
NECAP1-219ENST00000639811 WRNQ14191 1432 aaPredicted RBP eCLIP15.88■□□□□ 0.13
NECAP1-219ENST00000639811 EHMT2Q96KQ7 1210 aa15.87■□□□□ 0.13
NECAP1-219ENST00000639811 SYNJ1O43426 1573 aa15.84■□□□□ 0.13
NECAP1-219ENST00000639811 SOGA1O94964 1423 aa15.83■□□□□ 0.13
NECAP1-219ENST00000639811 RUSC2Q8N2Y8 1516 aa15.78■□□□□ 0.12
NECAP1-219ENST00000639811 CC2D2AQ9P2K1 1620 aa15.78■□□□□ 0.12
NECAP1-219ENST00000639811 PCGF6Q9BYE7 350 aa15.75■□□□□ 0.11
NECAP1-219ENST00000639811 EEA1Q15075 1411 aa15.75■□□□□ 0.11
NECAP1-219ENST00000639811 CFTRP13569 1480 aa15.73■□□□□ 0.11
NECAP1-219ENST00000639811 CSRNP3Q8WYN3 585 aa15.7■□□□□ 0.1
NECAP1-219ENST00000639811 TOP2BQ02880 1626 aa15.7■□□□□ 0.1
NECAP1-219ENST00000639811 BIVM-ERCC5R4GMW8 1640 aa15.68■□□□□ 0.1
NECAP1-219ENST00000639811 CUX1P39880 1505 aa15.62■□□□□ 0.09
NECAP1-219ENST00000639811 PRDM2Q13029 1718 aa15.62■□□□□ 0.09
NECAP1-219ENST00000639811 TRIM26Q12899 539 aaPredicted RBP15.62■□□□□ 0.09
NECAP1-219ENST00000639811 CADPSQ9ULU8 1353 aa15.61■□□□□ 0.09
NECAP1-219ENST00000639811 TNIKQ9UKE5 1360 aa15.61■□□□□ 0.09
NECAP1-219ENST00000639811 GOLGA3Q08378 1498 aa15.59■□□□□ 0.09
NECAP1-219ENST00000639811 CEP162Q5TB80 1403 aa15.57■□□□□ 0.08
NECAP1-219ENST00000639811 KIF21BO75037 1637 aa15.56■□□□□ 0.08
NECAP1-219ENST00000639811 CEP164Q9UPV0 1460 aa15.55■□□□□ 0.08
NECAP1-219ENST00000639811 UBTFP17480 764 aaKnown RBP15.54■□□□□ 0.08
NECAP1-219ENST00000639811 HRCP23327 699 aa15.52■□□□□ 0.07
NECAP1-219ENST00000639811 RAPGEF2Q9Y4G8 1499 aa15.48■□□□□ 0.07
NECAP1-219ENST00000639811 FANCD2Q9BXW9 1451 aa15.45■□□□□ 0.06
NECAP1-219ENST00000639811 NESP48681 1621 aa15.45■□□□□ 0.06
NECAP1-219ENST00000639811 PPARGC1BQ86YN6 1023 aaKnown RBP15.45■□□□□ 0.06
NECAP1-219ENST00000639811 KIF27Q86VH2 1401 aa15.43■□□□□ 0.06
NECAP1-219ENST00000639811 PRXQ9BXM0 1461 aa15.42■□□□□ 0.06
NECAP1-219ENST00000639811 DNAJC5BQ9UF47 199 aa15.42■□□□□ 0.06
NECAP1-219ENST00000639811 FGD5Q6ZNL6 1462 aa15.4■□□□□ 0.06
NECAP1-219ENST00000639811 ERICH3Q5RHP9 1530 aa15.39■□□□□ 0.05
NECAP1-219ENST00000639811 CLIP1P30622 1438 aa15.37■□□□□ 0.05
NECAP1-219ENST00000639811 LAMC3Q9Y6N6 1575 aa15.37■□□□□ 0.05
NECAP1-219ENST00000639811 CUX2O14529 1486 aa15.35■□□□□ 0.05
NECAP1-219ENST00000639811 DNMBPQ6XZF7 1577 aa15.34■□□□□ 0.05
NECAP1-219ENST00000639811 TOPBP1Q92547 1522 aa15.32■□□□□ 0.04
NECAP1-219ENST00000639811 IGF1RP08069 1367 aa15.3■□□□□ 0.04
NECAP1-219ENST00000639811 POLA1P09884 1462 aaPredicted RBP15.28■□□□□ 0.04
NECAP1-219ENST00000639811 RANGAP1P46060 587 aaPredicted RBP15.27■□□□□ 0.04
NECAP1-219ENST00000639811 VPS8Q8N3P4 1428 aa15.27■□□□□ 0.03
NECAP1-219ENST00000639811 RAD54L2Q9Y4B4 1467 aa15.27■□□□□ 0.03
NECAP1-219ENST00000639811 URB2Q14146 1524 aaKnown RBP15.27■□□□□ 0.03
NECAP1-219ENST00000639811 TTBK1Q5TCY1 1321 aaPredicted RBP15.26■□□□□ 0.03
NECAP1-219ENST00000639811 PDS5BQ9NTI5 1447 aa15.25■□□□□ 0.03
NECAP1-219ENST00000639811 ABCA10Q8WWZ4 1543 aa15.24■□□□□ 0.03
NECAP1-219ENST00000639811 KIF21AQ7Z4S6 1674 aa15.22■□□□□ 0.03
NECAP1-219ENST00000639811 CARMIL1Q5VZK9 1371 aa15.21■□□□□ 0.03
NECAP1-219ENST00000639811 ARAP1Q96P48 1450 aa15.21■□□□□ 0.02
NECAP1-219ENST00000639811 WDR97A6NE52 1622 aa15.17■□□□□ 0.02
NECAP1-219ENST00000639811 ARHGAP35Q9NRY4 1499 aa15.14■□□□□ 0.01
NECAP1-219ENST00000639811 ABCA5Q8WWZ7 1642 aa15.1■□□□□ 0.01
NECAP1-219ENST00000639811 CUL7Q14999 1698 aa15.1■□□□□ 0.01
NECAP1-219ENST00000639811 TDRD9Q8NDG6 1382 aaKnown RBP15.09■□□□□ 0.01
NECAP1-219ENST00000639811 ZEB1P37275 1124 aaPredicted RBP15.09■□□□□ 0.01
NECAP1-219ENST00000639811 APLP2Q06481 763 aa15.09■□□□□ 0.01
NECAP1-219ENST00000639811 TARBP1Q13395 1621 aaKnown RBP15.07■□□□□ 0
NECAP1-219ENST00000639811 GAPVD1Q14C86 1478 aa15.05■□□□□ 0
NECAP1-219ENST00000639811 MRC2Q9UBG0 1479 aa15.05■□□□□ 0
NECAP1-219ENST00000639811 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.04■□□□□ -0
NECAP1-219ENST00000639811 KANK4Q5T7N3 995 aaPredicted RBP15.01□□□□□ -0.01
NECAP1-219ENST00000639811 CTTNBP2Q8WZ74 1663 aa14.99□□□□□ -0.01
NECAP1-219ENST00000639811 WDR62O43379 1518 aa14.96□□□□□ -0.01
NECAP1-219ENST00000639811 CCER1Q8TC90 406 aaPredicted RBP14.96□□□□□ -0.01
NECAP1-219ENST00000639811 PBRM1Q86U86 1689 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 125.7 ms