RNA–Protein interactions for RNA: ENST00000405396.2

RNF216P1-204, Transcript of ring finger protein 216 pseudogene 1, humanhuman

TSL 3

Gene RNF216P1, Length 899 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216P1-204ENST00000405396 NISCHQ9Y2I1 1504 aa25.1■■□□□ 1.61
RNF216P1-204ENST00000405396 ABCC9O60706 1549 aa23.23■■□□□ 1.31
RNF216P1-204ENST00000405396 CCDC180Q9P1Z9 1646 aa22.66■■□□□ 1.22
RNF216P1-204ENST00000405396 DNAJC5BQ9UF47 199 aa22.39■■□□□ 1.17
RNF216P1-204ENST00000405396 RB1CC1Q8TDY2 1594 aa21.82■■□□□ 1.08
RNF216P1-204ENST00000405396 NACADO15069 1562 aa21.58■■□□□ 1.05
RNF216P1-204ENST00000405396 PABPN1Q86U42 306 aaKnown RBP eCLIP21.57■■□□□ 1.04
RNF216P1-204ENST00000405396 AEBP2Q6ZN18 517 aaPredicted RBP21.34■■□□□ 1.01
RNF216P1-204ENST00000405396 BICRAQ9NZM4 1560 aa21.34■■□□□ 1.01
RNF216P1-204ENST00000405396 UNC13AQ9UPW8 1703 aa21.32■■□□□ 1
RNF216P1-204ENST00000405396 DCAF8L2P0C7V8 631 aa21.27■■□□□ 1
RNF216P1-204ENST00000405396 MYO15BQ96JP2 1530 aa21.17■□□□□ 0.98
RNF216P1-204ENST00000405396 CECR2Q9BXF3 1484 aa20.99■□□□□ 0.95
RNF216P1-204ENST00000405396 CC2D2AQ9P2K1 1620 aa20.95■□□□□ 0.94
RNF216P1-204ENST00000405396 SHROOM4Q9ULL8 1493 aa20.93■□□□□ 0.94
RNF216P1-204ENST00000405396 DNAJC5Q9H3Z4 198 aa20.86■□□□□ 0.93
RNF216P1-204ENST00000405396 EIF4G1Q04637 1599 aaKnown RBP20.8■□□□□ 0.92
RNF216P1-204ENST00000405396 ZCCHC6Q5VYS8 1495 aaKnown RBP20.72■□□□□ 0.91
RNF216P1-204ENST00000405396 DCAF1Q9Y4B6 1507 aa20.71■□□□□ 0.91
RNF216P1-204ENST00000405396 SCRIBQ14160 1630 aa20.64■□□□□ 0.9
RNF216P1-204ENST00000405396 CUX2O14529 1486 aa20.23■□□□□ 0.83
RNF216P1-204ENST00000405396 CHIC1Q5VXU3 224 aa20.11■□□□□ 0.81
RNF216P1-204ENST00000405396 ERCC6Q03468 1493 aa20.03■□□□□ 0.8
RNF216P1-204ENST00000405396 NCAPD3P42695 1498 aa20■□□□□ 0.79
RNF216P1-204ENST00000405396 ATAD2BQ9ULI0 1458 aa19.86■□□□□ 0.77
RNF216P1-204ENST00000405396 NESP48681 1621 aa19.86■□□□□ 0.77
RNF216P1-204ENST00000405396 HMGXB3Q12766 1538 aa19.76■□□□□ 0.75
RNF216P1-204ENST00000405396 THOC2Q8NI27 1593 aaKnown RBP19.73■□□□□ 0.75
RNF216P1-204ENST00000405396 SMARCA2P51531 1590 aa19.7■□□□□ 0.74
RNF216P1-204ENST00000405396 SMARCA4P51532 1647 aa19.66■□□□□ 0.74
RNF216P1-204ENST00000405396 TRIM41Q8WV44 630 aa19.63■□□□□ 0.73
RNF216P1-204ENST00000405396 BAZ1BQ9UIG0 1483 aaKnown RBP19.57■□□□□ 0.72
RNF216P1-204ENST00000405396 LAMC3Q9Y6N6 1575 aa19.54■□□□□ 0.72
RNF216P1-204ENST00000405396 PEG3Q9GZU2 1588 aa19.52■□□□□ 0.71
RNF216P1-204ENST00000405396 KIF21AQ7Z4S6 1674 aa19.48■□□□□ 0.71
RNF216P1-204ENST00000405396 BAZ1AQ9NRL2 1556 aaPredicted RBP19.46■□□□□ 0.71
RNF216P1-204ENST00000405396 PDS5BQ9NTI5 1447 aa19.45■□□□□ 0.7
RNF216P1-204ENST00000405396 MROH2BQ7Z745 1585 aa19.36■□□□□ 0.69
RNF216P1-204ENST00000405396 MRC2Q9UBG0 1479 aa19.35■□□□□ 0.69
RNF216P1-204ENST00000405396 WDR62O43379 1518 aa19.35■□□□□ 0.69
RNF216P1-204ENST00000405396 CADPSQ9ULU8 1353 aa19.34■□□□□ 0.69
RNF216P1-204ENST00000405396 OSCARQ8IYS5 282 aa19.19■□□□□ 0.66
RNF216P1-204ENST00000405396 CEP164Q9UPV0 1460 aa19.14■□□□□ 0.65
RNF216P1-204ENST00000405396 FANCD2Q9BXW9 1451 aa19.1■□□□□ 0.65
RNF216P1-204ENST00000405396 CFTRP13569 1480 aa19.03■□□□□ 0.64
RNF216P1-204ENST00000405396 WIZO95785 1651 aa19.03■□□□□ 0.64
RNF216P1-204ENST00000405396 URB2Q14146 1524 aaKnown RBP19.03■□□□□ 0.64
RNF216P1-204ENST00000405396 RIMBP3CA6NJZ7 1639 aa19.01■□□□□ 0.63
RNF216P1-204ENST00000405396 RIMBP3BA6NNM3 1639 aa19.01■□□□□ 0.63
RNF216P1-204ENST00000405396 RIMBP3Q9UFD9 1639 aa19.01■□□□□ 0.63
RNF216P1-204ENST00000405396 ARHGEF11O15085 1522 aa18.94■□□□□ 0.62
RNF216P1-204ENST00000405396 ZNF608Q9ULD9 1512 aaPredicted RBP18.89■□□□□ 0.61
RNF216P1-204ENST00000405396 IFT140Q96RY7 1462 aa18.81■□□□□ 0.6
RNF216P1-204ENST00000405396 RSF1Q96T23 1441 aaPredicted RBP18.78■□□□□ 0.6
RNF216P1-204ENST00000405396 CYB5RLQ6IPT4 315 aa18.78■□□□□ 0.6
RNF216P1-204ENST00000405396 TOP2AP11388 1531 aaKnown RBP18.78■□□□□ 0.6
RNF216P1-204ENST00000405396 ARAP1Q96P48 1450 aa18.75■□□□□ 0.59
RNF216P1-204ENST00000405396 TOPBP1Q92547 1522 aa18.7■□□□□ 0.58
RNF216P1-204ENST00000405396 EIF4G3O43432 1585 aaKnown RBP18.68■□□□□ 0.58
RNF216P1-204ENST00000405396 TRHP20396 242 aaPredicted RBP18.66■□□□□ 0.58
RNF216P1-204ENST00000405396 PRDM2Q13029 1718 aa18.63■□□□□ 0.57
RNF216P1-204ENST00000405396 AQRO60306 1485 aaKnown RBP eCLIP18.62■□□□□ 0.576e-7■■■□□ 18.4
RNF216P1-204ENST00000405396 CCDC88BA6NC98 1476 aa18.59■□□□□ 0.57
RNF216P1-204ENST00000405396 CHD1O14646 1710 aa18.59■□□□□ 0.57
RNF216P1-204ENST00000405396 TARBP1Q13395 1621 aaKnown RBP18.58■□□□□ 0.56
RNF216P1-204ENST00000405396 DNMBPQ6XZF7 1577 aa18.55■□□□□ 0.56
RNF216P1-204ENST00000405396 ABCC8Q09428 1581 aa18.54■□□□□ 0.56
RNF216P1-204ENST00000405396 POLA1P09884 1462 aaPredicted RBP18.5■□□□□ 0.55
RNF216P1-204ENST00000405396 FBLN2P98095 1184 aa18.49■□□□□ 0.55
RNF216P1-204ENST00000405396 CLASP1Q7Z460 1538 aa18.48■□□□□ 0.55
RNF216P1-204ENST00000405396 SENP3Q9H4L4 574 aaPredicted RBP18.46■□□□□ 0.55
RNF216P1-204ENST00000405396 RAD54L2Q9Y4B4 1467 aa18.44■□□□□ 0.54
RNF216P1-204ENST00000405396 TDRD9Q8NDG6 1382 aaKnown RBP18.42■□□□□ 0.54
RNF216P1-204ENST00000405396 SNAPC4Q5SXM2 1469 aa18.39■□□□□ 0.54
RNF216P1-204ENST00000405396 SOGA1O94964 1423 aa18.35■□□□□ 0.53
RNF216P1-204ENST00000405396 SYNJ1O43426 1573 aa18.31■□□□□ 0.52
RNF216P1-204ENST00000405396 MAGI1Q96QZ7 1491 aaPredicted RBP18.31■□□□□ 0.52
RNF216P1-204ENST00000405396 CHMP7Q8WUX9 453 aaPredicted RBP18.29■□□□□ 0.52
RNF216P1-204ENST00000405396 WDR97A6NE52 1622 aa18.28■□□□□ 0.52
RNF216P1-204ENST00000405396 GAPVD1Q14C86 1478 aa18.27■□□□□ 0.52
RNF216P1-204ENST00000405396 FGD5Q6ZNL6 1462 aa18.27■□□□□ 0.52
RNF216P1-204ENST00000405396 SYNJ2O15056 1496 aa18.26■□□□□ 0.51
RNF216P1-204ENST00000405396 GRIN2BQ13224 1484 aa18.26■□□□□ 0.51
RNF216P1-204ENST00000405396 CUX1P39880 1505 aa18.21■□□□□ 0.51
RNF216P1-204ENST00000405396 ERCC6L2Q5T890 1561 aa18.17■□□□□ 0.5
RNF216P1-204ENST00000405396 PBRM1Q86U86 1689 aa18.07■□□□□ 0.48
RNF216P1-204ENST00000405396 PHF23Q9BUL5 403 aaPredicted RBP18.07■□□□□ 0.48
RNF216P1-204ENST00000405396 ABCA5Q8WWZ7 1642 aa18.06■□□□□ 0.48
RNF216P1-204ENST00000405396 ABCA10Q8WWZ4 1543 aa18.05■□□□□ 0.48
RNF216P1-204ENST00000405396 NUP160Q12769 1436 aa18.05■□□□□ 0.48
RNF216P1-204ENST00000405396 CEP170Q5SW79 1584 aa18.04■□□□□ 0.48
RNF216P1-204ENST00000405396 GRIN2AQ12879 1464 aa18.03■□□□□ 0.48
RNF216P1-204ENST00000405396 SHROOM2Q13796 1616 aa17.98■□□□□ 0.47
RNF216P1-204ENST00000405396 KIF13AQ9H1H9 1805 aa17.98■□□□□ 0.47
RNF216P1-204ENST00000405396 ADAMTS12P58397 1594 aa17.96■□□□□ 0.46
RNF216P1-204ENST00000405396 KDM4FA0A1W2PPD8 638 aa17.9■□□□□ 0.46
RNF216P1-204ENST00000405396 FHAD1B1AJZ9 1412 aa17.89■□□□□ 0.45
RNF216P1-204ENST00000405396 ABCC10Q5T3U5 1492 aa17.88■□□□□ 0.45
RNF216P1-204ENST00000405396 PRG4Q92954 1404 aaPredicted RBP17.86■□□□□ 0.45
RNF216P1-204ENST00000405396 ILDR1Q86SU0 546 aaPredicted RBP17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms