RNA–Protein interactions for RNA: ENST00000540083.1

NECAP1-204, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 863 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-204ENST00000540083 AEBP2Q6ZN18 517 aaPredicted RBP23.69■■□□□ 1.38
NECAP1-204ENST00000540083 CHIC1Q5VXU3 224 aa22.9■■□□□ 1.26
NECAP1-204ENST00000540083 SENP3Q9H4L4 574 aaPredicted RBP20.15■□□□□ 0.82
NECAP1-204ENST00000540083 PHF23Q9BUL5 403 aaPredicted RBP20.12■□□□□ 0.81
NECAP1-204ENST00000540083 FOXD1Q16676 465 aa18.73■□□□□ 0.59
NECAP1-204ENST00000540083 PLPPR3Q6T4P5 718 aa18.5■□□□□ 0.55
NECAP1-204ENST00000540083 PPP6R1Q9UPN7 881 aa17.84■□□□□ 0.45
NECAP1-204ENST00000540083 ADRA2BP18089 450 aa17.8■□□□□ 0.44
NECAP1-204ENST00000540083 PIAS4Q8N2W9 510 aaPredicted RBP17.59■□□□□ 0.41
NECAP1-204ENST00000540083 MSH5O43196 834 aa17.38■□□□□ 0.37
NECAP1-204ENST00000540083 NISCHQ9Y2I1 1504 aa16.97■□□□□ 0.31
NECAP1-204ENST00000540083 SCAF1Q9H7N4 1312 aaKnown RBP16.32■□□□□ 0.2
NECAP1-204ENST00000540083 PPP4R3CPQ6ZMV5 832 aa16.26■□□□□ 0.19
NECAP1-204ENST00000540083 POTEDQ86YR6 584 aa16.24■□□□□ 0.19
NECAP1-204ENST00000540083 MAPK8IP2Q13387 824 aaPredicted RBP16.23■□□□□ 0.19
NECAP1-204ENST00000540083 DMRT2Q9Y5R5 561 aa16.05■□□□□ 0.16
NECAP1-204ENST00000540083 CNKSR2Q8WXI2 1034 aa15.87■□□□□ 0.13
NECAP1-204ENST00000540083 NCBP3Q53F19 620 aaKnown RBP15.78■□□□□ 0.12
NECAP1-204ENST00000540083 HOXD11P31277 338 aaPredicted RBP15.62■□□□□ 0.09
NECAP1-204ENST00000540083 RNF216Q9NWF9 866 aaPredicted RBP15.62■□□□□ 0.09
NECAP1-204ENST00000540083 KCNA4P22459 653 aa15.6■□□□□ 0.09
NECAP1-204ENST00000540083 NPM3O75607 178 aaKnown RBP15.54■□□□□ 0.08
NECAP1-204ENST00000540083 DCAF8L1A6NGE4 600 aa15.35■□□□□ 0.05
NECAP1-204ENST00000540083 DNAJC5BQ9UF47 199 aa15.15■□□□□ 0.02
NECAP1-204ENST00000540083 CCDC180Q9P1Z9 1646 aa15.04■□□□□ -0
NECAP1-204ENST00000540083 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.88□□□□□ -0.03
NECAP1-204ENST00000540083 RNF39Q9H2S5 420 aa14.87□□□□□ -0.03
NECAP1-204ENST00000540083 SLC4A1APQ9BWU0 796 aaKnown RBP14.82□□□□□ -0.04
NECAP1-204ENST00000540083 SLC4A2P04920 1241 aa14.73□□□□□ -0.05
NECAP1-204ENST00000540083 C1QBPQ07021 282 aaKnown RBP14.68□□□□□ -0.06
NECAP1-204ENST00000540083 CACNB1Q02641 598 aaPredicted RBP14.65□□□□□ -0.06
NECAP1-204ENST00000540083 U3KPZ7 1027 aaPredicted RBP14.61□□□□□ -0.07
NECAP1-204ENST00000540083 ABCC9O60706 1549 aa14.5□□□□□ -0.09
NECAP1-204ENST00000540083 FOXD4L1Q9NU39 408 aa14.43□□□□□ -0.1
NECAP1-204ENST00000540083 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.36□□□□□ -0.11
NECAP1-204ENST00000540083 HNRNPUL2Q1KMD3 747 aaKnown RBP14.36□□□□□ -0.11
NECAP1-204ENST00000540083 ZBTB22O15209 634 aa14.35□□□□□ -0.11
NECAP1-204ENST00000540083 MYCNP04198 464 aaPredicted RBP14.35□□□□□ -0.11
NECAP1-204ENST00000540083 SAMD1Q6SPF0 538 aaPredicted RBP14.3□□□□□ -0.12
NECAP1-204ENST00000540083 SPINK5Q9NQ38 1064 aaPredicted RBP14.27□□□□□ -0.13
NECAP1-204ENST00000540083 APLP2Q06481 763 aa14.26□□□□□ -0.13
NECAP1-204ENST00000540083 CAPN15O75808 1086 aa14.23□□□□□ -0.13
NECAP1-204ENST00000540083 DCAF8L2P0C7V8 631 aa14.17□□□□□ -0.14
NECAP1-204ENST00000540083 ZCCHC6Q5VYS8 1495 aaKnown RBP14.15□□□□□ -0.14
NECAP1-204ENST00000540083 NACADO15069 1562 aa14.14□□□□□ -0.15
NECAP1-204ENST00000540083 MYO15BQ96JP2 1530 aa14.14□□□□□ -0.15
NECAP1-204ENST00000540083 RB1CC1Q8TDY2 1594 aa14.11□□□□□ -0.15
NECAP1-204ENST00000540083 DCAF1Q9Y4B6 1507 aa14.1□□□□□ -0.15
NECAP1-204ENST00000540083 TRHP20396 242 aaPredicted RBP14.1□□□□□ -0.15
NECAP1-204ENST00000540083 ZNF219Q9P2Y4 722 aaPredicted RBP14.1□□□□□ -0.15
NECAP1-204ENST00000540083 EHMT2Q96KQ7 1210 aa14.09□□□□□ -0.15
NECAP1-204ENST00000540083 CSRNP3Q8WYN3 585 aa14.08□□□□□ -0.16
NECAP1-204ENST00000540083 DSG3P32926 999 aa14.06□□□□□ -0.16
NECAP1-204ENST00000540083 ATF5Q9Y2D1 282 aaPredicted RBP14□□□□□ -0.17
NECAP1-204ENST00000540083 ATXN8OSP0DMR3 200 aa13.99□□□□□ -0.17
NECAP1-204ENST00000540083 ABCB7O75027 752 aa13.92□□□□□ -0.18
NECAP1-204ENST00000540083 POLA2Q14181 598 aa13.84□□□□□ -0.19
NECAP1-204ENST00000540083 SCRIBQ14160 1630 aa13.65□□□□□ -0.22
NECAP1-204ENST00000540083 UNC13AQ9UPW8 1703 aa13.64□□□□□ -0.23
NECAP1-204ENST00000540083 SHROOM4Q9ULL8 1493 aa13.61□□□□□ -0.23
NECAP1-204ENST00000540083 ZBTB12Q9Y330 459 aaPredicted RBP13.59□□□□□ -0.23
NECAP1-204ENST00000540083 PABPN1Q86U42 306 aaKnown RBP eCLIP13.57□□□□□ -0.24
NECAP1-204ENST00000540083 BICRAQ9NZM4 1560 aa13.54□□□□□ -0.24
NECAP1-204ENST00000540083 FBLN2P98095 1184 aa13.43□□□□□ -0.26
NECAP1-204ENST00000540083 RBM42Q9BTD8 480 aaKnown RBP13.4□□□□□ -0.26
NECAP1-204ENST00000540083 MKRN4PQ13434 485 aaPredicted RBP13.37□□□□□ -0.27
NECAP1-204ENST00000540083 OSCARQ8IYS5 282 aa13.35□□□□□ -0.27
NECAP1-204ENST00000540083 EIF4G1Q04637 1599 aaKnown RBP13.24□□□□□ -0.29
NECAP1-204ENST00000540083 SPDYE2BA6NHP3 402 aa13.2□□□□□ -0.3
NECAP1-204ENST00000540083 SPDYE6P0CI01 402 aa13.2□□□□□ -0.3
NECAP1-204ENST00000540083 SPDYE2Q495Y8 402 aa13.2□□□□□ -0.3
NECAP1-204ENST00000540083 AKT1S1Q96B36 256 aa13.19□□□□□ -0.3
NECAP1-204ENST00000540083 BAZ1AQ9NRL2 1556 aaPredicted RBP13.19□□□□□ -0.3
NECAP1-204ENST00000540083 CC2D2AQ9P2K1 1620 aa13.13□□□□□ -0.31
NECAP1-204ENST00000540083 CECR2Q9BXF3 1484 aa13.12□□□□□ -0.31
NECAP1-204ENST00000540083 ZNF692Q9BU19 519 aaPredicted RBP13.12□□□□□ -0.31
NECAP1-204ENST00000540083 SMARCA4P51532 1647 aa13.11□□□□□ -0.31
NECAP1-204ENST00000540083 SMARCA2P51531 1590 aa13.08□□□□□ -0.32
NECAP1-204ENST00000540083 REM2Q8IYK8 340 aaPredicted RBP13.07□□□□□ -0.32
NECAP1-204ENST00000540083 SSUH2Q9Y2M2 353 aa13.06□□□□□ -0.32
NECAP1-204ENST00000540083 NCAPD3P42695 1498 aa13.03□□□□□ -0.32
NECAP1-204ENST00000540083 ATAD2BQ9ULI0 1458 aa13.02□□□□□ -0.33
NECAP1-204ENST00000540083 MROH2BQ7Z745 1585 aa13.02□□□□□ -0.33
NECAP1-204ENST00000540083 PEG3Q9GZU2 1588 aa13.01□□□□□ -0.33
NECAP1-204ENST00000540083 HMGXB3Q12766 1538 aa12.97□□□□□ -0.33
NECAP1-204ENST00000540083 RSF1Q96T23 1441 aaPredicted RBP12.96□□□□□ -0.33
NECAP1-204ENST00000540083 SPDYE4A6NLX3 237 aa12.96□□□□□ -0.33
NECAP1-204ENST00000540083 BAZ1BQ9UIG0 1483 aaKnown RBP12.96□□□□□ -0.34
NECAP1-204ENST00000540083 CHRDL2Q6WN34 429 aa12.94□□□□□ -0.34
NECAP1-204ENST00000540083 PITPNM1O00562 1244 aa12.9□□□□□ -0.34
NECAP1-204ENST00000540083 WIZO95785 1651 aa12.88□□□□□ -0.35
NECAP1-204ENST00000540083 PELP1Q8IZL8 1130 aaKnown RBP12.87□□□□□ -0.35
NECAP1-204ENST00000540083 SPDYE1Q8NFV5 336 aaPredicted RBP12.87□□□□□ -0.35
NECAP1-204ENST00000540083 TOP2AP11388 1531 aaKnown RBP12.82□□□□□ -0.36
NECAP1-204ENST00000540083 POTEHQ6S545 545 aa12.81□□□□□ -0.36
NECAP1-204ENST00000540083 CLEC11AQ9Y240 323 aa12.81□□□□□ -0.36
NECAP1-204ENST00000540083 SUPT5HO00267 1087 aaKnown RBP12.79□□□□□ -0.36
NECAP1-204ENST00000540083 FXR2P51116 673 aaKnown RBP eCLIP12.73□□□□□ -0.37
NECAP1-204ENST00000540083 FKBP8Q14318 412 aa12.73□□□□□ -0.37
NECAP1-204ENST00000540083 PROM2Q8N271 834 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms