RNA–Protein interactions for RNA: ENST00000450991.6

NECAP1-202, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 1 (best)

Gene NECAP1, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-202ENST00000450991 NISCHQ9Y2I1 1504 aa18.74■□□□□ 0.59
NECAP1-202ENST00000450991 CCDC180Q9P1Z9 1646 aa16.4■□□□□ 0.22
NECAP1-202ENST00000450991 ZCCHC6Q5VYS8 1495 aaKnown RBP15.77■□□□□ 0.11
NECAP1-202ENST00000450991 DCAF8L2P0C7V8 631 aa15.64■□□□□ 0.09
NECAP1-202ENST00000450991 ABCC9O60706 1549 aa15.62■□□□□ 0.09
NECAP1-202ENST00000450991 DCAF1Q9Y4B6 1507 aa15.52■□□□□ 0.07
NECAP1-202ENST00000450991 SHROOM4Q9ULL8 1493 aa15.36■□□□□ 0.05
NECAP1-202ENST00000450991 MYO15BQ96JP2 1530 aa15.31■□□□□ 0.04
NECAP1-202ENST00000450991 NACADO15069 1562 aa15.2■□□□□ 0.02
NECAP1-202ENST00000450991 RB1CC1Q8TDY2 1594 aa15.08■□□□□ 0.01
NECAP1-202ENST00000450991 SCRIBQ14160 1630 aa15.06■□□□□ 0
NECAP1-202ENST00000450991 UNC13AQ9UPW8 1703 aa14.9□□□□□ -0.02
NECAP1-202ENST00000450991 PABPN1Q86U42 306 aaKnown RBP eCLIP14.77□□□□□ -0.04
NECAP1-202ENST00000450991 SUPT5HO00267 1087 aaKnown RBP14.73□□□□□ -0.05
NECAP1-202ENST00000450991 BICRAQ9NZM4 1560 aa14.66□□□□□ -0.06
NECAP1-202ENST00000450991 CECR2Q9BXF3 1484 aa14.6□□□□□ -0.07
NECAP1-202ENST00000450991 RSF1Q96T23 1441 aaPredicted RBP14.52□□□□□ -0.08
NECAP1-202ENST00000450991 MROH2BQ7Z745 1585 aa14.48□□□□□ -0.09
NECAP1-202ENST00000450991 BAZ1AQ9NRL2 1556 aaPredicted RBP14.47□□□□□ -0.09
NECAP1-202ENST00000450991 SMARCA4P51532 1647 aa14.43□□□□□ -0.1
NECAP1-202ENST00000450991 WIZO95785 1651 aa14.41□□□□□ -0.1
NECAP1-202ENST00000450991 PEG3Q9GZU2 1588 aa14.26□□□□□ -0.13
NECAP1-202ENST00000450991 EIF4G1Q04637 1599 aaKnown RBP14.24□□□□□ -0.13
NECAP1-202ENST00000450991 TOP2AP11388 1531 aaKnown RBP14.23□□□□□ -0.13
NECAP1-202ENST00000450991 ATAD2BQ9ULI0 1458 aa14.19□□□□□ -0.14
NECAP1-202ENST00000450991 SMARCA2P51531 1590 aa14.14□□□□□ -0.15
NECAP1-202ENST00000450991 BAZ1BQ9UIG0 1483 aaKnown RBP14.11□□□□□ -0.15
NECAP1-202ENST00000450991 CHIC1Q5VXU3 224 aa14.09□□□□□ -0.15
NECAP1-202ENST00000450991 CCDC88BA6NC98 1476 aa14.06□□□□□ -0.16
NECAP1-202ENST00000450991 CC2D2AQ9P2K1 1620 aa14.05□□□□□ -0.16
NECAP1-202ENST00000450991 NCAPD3P42695 1498 aa14.05□□□□□ -0.16
NECAP1-202ENST00000450991 HMGXB3Q12766 1538 aa14.02□□□□□ -0.16
NECAP1-202ENST00000450991 DNAJC5BQ9UF47 199 aa13.91□□□□□ -0.18
NECAP1-202ENST00000450991 PRDM2Q13029 1718 aa13.8□□□□□ -0.2
NECAP1-202ENST00000450991 ABCC8Q09428 1581 aa13.8□□□□□ -0.2
NECAP1-202ENST00000450991 TRIM41Q8WV44 630 aa13.8□□□□□ -0.2
NECAP1-202ENST00000450991 CFTRP13569 1480 aa13.73□□□□□ -0.21
NECAP1-202ENST00000450991 CADPSQ9ULU8 1353 aa13.73□□□□□ -0.21
NECAP1-202ENST00000450991 NESP48681 1621 aa13.68□□□□□ -0.22
NECAP1-202ENST00000450991 SYNJ1O43426 1573 aa13.67□□□□□ -0.22
NECAP1-202ENST00000450991 WRNQ14191 1432 aaPredicted RBP eCLIP13.66□□□□□ -0.22
NECAP1-202ENST00000450991 BIVM-ERCC5R4GMW8 1640 aa13.64□□□□□ -0.23
NECAP1-202ENST00000450991 FAM9AQ8IZU1 332 aaPredicted RBP13.63□□□□□ -0.23
NECAP1-202ENST00000450991 TOP2BQ02880 1626 aa13.61□□□□□ -0.23
NECAP1-202ENST00000450991 FANCD2Q9BXW9 1451 aa13.58□□□□□ -0.24
NECAP1-202ENST00000450991 LAMC3Q9Y6N6 1575 aa13.55□□□□□ -0.24
NECAP1-202ENST00000450991 CUX1P39880 1505 aa13.54□□□□□ -0.24
NECAP1-202ENST00000450991 LOC105371045A0A1W2PR82 267 aa13.54□□□□□ -0.24
NECAP1-202ENST00000450991 EHMT2Q96KQ7 1210 aa13.51□□□□□ -0.25
NECAP1-202ENST00000450991 SOGA1O94964 1423 aa13.51□□□□□ -0.25
NECAP1-202ENST00000450991 PDS5BQ9NTI5 1447 aa13.51□□□□□ -0.25
NECAP1-202ENST00000450991 EEA1Q15075 1411 aa13.49□□□□□ -0.25
NECAP1-202ENST00000450991 CEP164Q9UPV0 1460 aa13.48□□□□□ -0.25
NECAP1-202ENST00000450991 RUSC2Q8N2Y8 1516 aa13.48□□□□□ -0.25
NECAP1-202ENST00000450991 KIF21AQ7Z4S6 1674 aa13.45□□□□□ -0.26
NECAP1-202ENST00000450991 URB2Q14146 1524 aaKnown RBP13.42□□□□□ -0.26
NECAP1-202ENST00000450991 DNMBPQ6XZF7 1577 aa13.42□□□□□ -0.26
NECAP1-202ENST00000450991 TOPBP1Q92547 1522 aa13.41□□□□□ -0.26
NECAP1-202ENST00000450991 FGD5Q6ZNL6 1462 aa13.4□□□□□ -0.26
NECAP1-202ENST00000450991 KIF21BO75037 1637 aa13.39□□□□□ -0.27
NECAP1-202ENST00000450991 ERCC6Q03468 1493 aa13.38□□□□□ -0.27
NECAP1-202ENST00000450991 CSRNP3Q8WYN3 585 aa13.38□□□□□ -0.27
NECAP1-202ENST00000450991 POLA1P09884 1462 aaPredicted RBP13.35□□□□□ -0.27
NECAP1-202ENST00000450991 RAD54L2Q9Y4B4 1467 aa13.35□□□□□ -0.27
NECAP1-202ENST00000450991 MRC2Q9UBG0 1479 aa13.34□□□□□ -0.27
NECAP1-202ENST00000450991 CUX2O14529 1486 aa13.33□□□□□ -0.28
NECAP1-202ENST00000450991 WDR97A6NE52 1622 aa13.32□□□□□ -0.28
NECAP1-202ENST00000450991 GOLGA3Q08378 1498 aa13.31□□□□□ -0.28
NECAP1-202ENST00000450991 KIF27Q86VH2 1401 aa13.31□□□□□ -0.28
NECAP1-202ENST00000450991 ERICH3Q5RHP9 1530 aa13.27□□□□□ -0.29
NECAP1-202ENST00000450991 TNIKQ9UKE5 1360 aa13.27□□□□□ -0.29
NECAP1-202ENST00000450991 ABCA10Q8WWZ4 1543 aa13.26□□□□□ -0.29
NECAP1-202ENST00000450991 PRXQ9BXM0 1461 aa13.25□□□□□ -0.29
NECAP1-202ENST00000450991 TDRD9Q8NDG6 1382 aaKnown RBP13.25□□□□□ -0.29
NECAP1-202ENST00000450991 WDR62O43379 1518 aa13.24□□□□□ -0.29
NECAP1-202ENST00000450991 UBTFP17480 764 aaKnown RBP13.24□□□□□ -0.29
NECAP1-202ENST00000450991 RAPGEF2Q9Y4G8 1499 aa13.24□□□□□ -0.29
NECAP1-202ENST00000450991 IGF1RP08069 1367 aa13.23□□□□□ -0.29
NECAP1-202ENST00000450991 THOC2Q8NI27 1593 aaKnown RBP13.22□□□□□ -0.29
NECAP1-202ENST00000450991 TARBP1Q13395 1621 aaKnown RBP13.21□□□□□ -0.29
NECAP1-202ENST00000450991 CEP162Q5TB80 1403 aa13.21□□□□□ -0.29
NECAP1-202ENST00000450991 ABCA5Q8WWZ7 1642 aa13.2□□□□□ -0.3
NECAP1-202ENST00000450991 AQRO60306 1485 aaKnown RBP eCLIP13.17□□□□□ -0.36e-7■■■■■ 30.6
NECAP1-202ENST00000450991 CUL7Q14999 1698 aa13.16□□□□□ -0.3
NECAP1-202ENST00000450991 CARMIL1Q5VZK9 1371 aa13.16□□□□□ -0.3
NECAP1-202ENST00000450991 ZNF608Q9ULD9 1512 aaPredicted RBP13.16□□□□□ -0.3
NECAP1-202ENST00000450991 GAPVD1Q14C86 1478 aa13.15□□□□□ -0.3
NECAP1-202ENST00000450991 IFT140Q96RY7 1462 aa13.15□□□□□ -0.3
NECAP1-202ENST00000450991 RANGAP1P46060 587 aaPredicted RBP13.15□□□□□ -0.3
NECAP1-202ENST00000450991 PBRM1Q86U86 1689 aa13.14□□□□□ -0.31
NECAP1-202ENST00000450991 CTTNBP2Q8WZ74 1663 aa13.08□□□□□ -0.32
NECAP1-202ENST00000450991 CLIP1P30622 1438 aa13.08□□□□□ -0.32
NECAP1-202ENST00000450991 GRIN2BQ13224 1484 aa13.05□□□□□ -0.32
NECAP1-202ENST00000450991 EIF4G3O43432 1585 aaKnown RBP13.04□□□□□ -0.32
NECAP1-202ENST00000450991 SNAPC4Q5SXM2 1469 aa13.01□□□□□ -0.33
NECAP1-202ENST00000450991 ADAMTS12P58397 1594 aa13.01□□□□□ -0.33
NECAP1-202ENST00000450991 FHAD1B1AJZ9 1412 aa13□□□□□ -0.33
NECAP1-202ENST00000450991 ARAP1Q96P48 1450 aa12.99□□□□□ -0.33
NECAP1-202ENST00000450991 VPS8Q8N3P4 1428 aa12.99□□□□□ -0.33
NECAP1-202ENST00000450991 FBLN2P98095 1184 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms