RNA–Protein interactions for RNA: ENST00000404404.5

RNF216P1-203, Transcript of ring finger protein 216 pseudogene 1, humanhuman

BASIC

Gene RNF216P1, Length 2,427 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216P1-203ENST00000404404 NISCHQ9Y2I1 1504 aa37.03■■■■□ 3.52
RNF216P1-203ENST00000404404 CCDC180Q9P1Z9 1646 aa31.79■■■□□ 2.68
RNF216P1-203ENST00000404404 ZCCHC6Q5VYS8 1495 aaKnown RBP31.21■■■□□ 2.59
RNF216P1-203ENST00000404404 SHROOM4Q9ULL8 1493 aa31.04■■■□□ 2.56
RNF216P1-203ENST00000404404 DCAF8L2P0C7V8 631 aa30.78■■■□□ 2.52
RNF216P1-203ENST00000404404 DCAF1Q9Y4B6 1507 aa30.4■■■□□ 2.46
RNF216P1-203ENST00000404404 SUPT5HO00267 1087 aaKnown RBP30.12■■■□□ 2.41
RNF216P1-203ENST00000404404 ABCC9O60706 1549 aa29.97■■■□□ 2.39
RNF216P1-203ENST00000404404 MYO15BQ96JP2 1530 aa29.76■■■□□ 2.36
RNF216P1-203ENST00000404404 SCRIBQ14160 1630 aa29.66■■■□□ 2.34
RNF216P1-203ENST00000404404 NACADO15069 1562 aa29.53■■■□□ 2.32
RNF216P1-203ENST00000404404 RB1CC1Q8TDY2 1594 aa29.17■■■□□ 2.26
RNF216P1-203ENST00000404404 RSF1Q96T23 1441 aaPredicted RBP29.06■■■□□ 2.24
RNF216P1-203ENST00000404404 CHIC1Q5VXU3 224 aa29.02■■■□□ 2.24
RNF216P1-203ENST00000404404 CECR2Q9BXF3 1484 aa28.95■■■□□ 2.23
RNF216P1-203ENST00000404404 MROH2BQ7Z745 1585 aa28.77■■■□□ 2.2
RNF216P1-203ENST00000404404 UNC13AQ9UPW8 1703 aa28.76■■■□□ 2.19
RNF216P1-203ENST00000404404 WIZO95785 1651 aa28.57■■■□□ 2.16
RNF216P1-203ENST00000404404 PABPN1Q86U42 306 aaKnown RBP eCLIP28.52■■■□□ 2.16
RNF216P1-203ENST00000404404 BAZ1AQ9NRL2 1556 aaPredicted RBP28.47■■■□□ 2.15
RNF216P1-203ENST00000404404 BICRAQ9NZM4 1560 aa28.46■■■□□ 2.15
RNF216P1-203ENST00000404404 SMARCA4P51532 1647 aa28.34■■■□□ 2.13
RNF216P1-203ENST00000404404 LOC105371045A0A1W2PR82 267 aa28.13■■■□□ 2.09
RNF216P1-203ENST00000404404 TOP2AP11388 1531 aaKnown RBP28.11■■■□□ 2.09
RNF216P1-203ENST00000404404 TRIM41Q8WV44 630 aa28.1■■■□□ 2.09
RNF216P1-203ENST00000404404 CCDC88BA6NC98 1476 aa27.98■■■□□ 2.07
RNF216P1-203ENST00000404404 SMARCA2P51531 1590 aa27.95■■■□□ 2.07
RNF216P1-203ENST00000404404 EIF4G1Q04637 1599 aaKnown RBP27.94■■■□□ 2.06
RNF216P1-203ENST00000404404 FAM9AQ8IZU1 332 aaPredicted RBP27.85■■■□□ 2.05
RNF216P1-203ENST00000404404 PEG3Q9GZU2 1588 aa27.84■■■□□ 2.05
RNF216P1-203ENST00000404404 ATAD2BQ9ULI0 1458 aa27.77■■■□□ 2.04
RNF216P1-203ENST00000404404 ABCC8Q09428 1581 aa27.7■■■□□ 2.02
RNF216P1-203ENST00000404404 BAZ1BQ9UIG0 1483 aaKnown RBP27.62■■■□□ 2.01
RNF216P1-203ENST00000404404 EHMT2Q96KQ7 1210 aa27.61■■■□□ 2.01
RNF216P1-203ENST00000404404 PCGF6Q9BYE7 350 aa27.39■■□□□ 1.98
RNF216P1-203ENST00000404404 NCAPD3P42695 1498 aa27.35■■□□□ 1.97
RNF216P1-203ENST00000404404 SOGA1O94964 1423 aa27.3■■□□□ 1.96
RNF216P1-203ENST00000404404 WRNQ14191 1432 aaPredicted RBP eCLIP27.29■■□□□ 1.96
RNF216P1-203ENST00000404404 HMGXB3Q12766 1538 aa27.28■■□□□ 1.96
RNF216P1-203ENST00000404404 RUSC2Q8N2Y8 1516 aa27.23■■□□□ 1.95
RNF216P1-203ENST00000404404 SYNJ1O43426 1573 aa27.21■■□□□ 1.95
RNF216P1-203ENST00000404404 CSRNP3Q8WYN3 585 aa27.06■■□□□ 1.92
RNF216P1-203ENST00000404404 TRIM26Q12899 539 aaPredicted RBP27.02■■□□□ 1.92
RNF216P1-203ENST00000404404 CC2D2AQ9P2K1 1620 aa27■■□□□ 1.91
RNF216P1-203ENST00000404404 EEA1Q15075 1411 aa27■■□□□ 1.91
RNF216P1-203ENST00000404404 HRCP23327 699 aa26.95■■□□□ 1.9
RNF216P1-203ENST00000404404 CFTRP13569 1480 aa26.94■■□□□ 1.9
RNF216P1-203ENST00000404404 TOP2BQ02880 1626 aa26.91■■□□□ 1.9
RNF216P1-203ENST00000404404 PPARGC1BQ86YN6 1023 aaKnown RBP26.87■■□□□ 1.89
RNF216P1-203ENST00000404404 TNIKQ9UKE5 1360 aa26.85■■□□□ 1.89
RNF216P1-203ENST00000404404 UBTFP17480 764 aaKnown RBP26.85■■□□□ 1.89
RNF216P1-203ENST00000404404 CEP162Q5TB80 1403 aa26.84■■□□□ 1.89
RNF216P1-203ENST00000404404 BIVM-ERCC5R4GMW8 1640 aa26.84■■□□□ 1.89
RNF216P1-203ENST00000404404 CUX1P39880 1505 aa26.82■■□□□ 1.88
RNF216P1-203ENST00000404404 GOLGA3Q08378 1498 aa26.8■■□□□ 1.88
RNF216P1-203ENST00000404404 CADPSQ9ULU8 1353 aa26.76■■□□□ 1.87
RNF216P1-203ENST00000404404 CEP164Q9UPV0 1460 aa26.72■■□□□ 1.87
RNF216P1-203ENST00000404404 KIF21BO75037 1637 aa26.7■■□□□ 1.86
RNF216P1-203ENST00000404404 RAPGEF2Q9Y4G8 1499 aa26.67■■□□□ 1.86
RNF216P1-203ENST00000404404 PRDM2Q13029 1718 aa26.67■■□□□ 1.86
RNF216P1-203ENST00000404404 DNAJC5BQ9UF47 199 aa26.57■■□□□ 1.84
RNF216P1-203ENST00000404404 TTBK1Q5TCY1 1321 aaPredicted RBP26.55■■□□□ 1.84
RNF216P1-203ENST00000404404 NESP48681 1621 aa26.54■■□□□ 1.84
RNF216P1-203ENST00000404404 PRXQ9BXM0 1461 aa26.49■■□□□ 1.83
RNF216P1-203ENST00000404404 FANCD2Q9BXW9 1451 aa26.49■■□□□ 1.83
RNF216P1-203ENST00000404404 KIF27Q86VH2 1401 aa26.49■■□□□ 1.83
RNF216P1-203ENST00000404404 RANGAP1P46060 587 aaPredicted RBP26.48■■□□□ 1.83
RNF216P1-203ENST00000404404 CLIP1P30622 1438 aa26.48■■□□□ 1.83
RNF216P1-203ENST00000404404 FGD5Q6ZNL6 1462 aa26.43■■□□□ 1.82
RNF216P1-203ENST00000404404 CUX2O14529 1486 aa26.39■■□□□ 1.81
RNF216P1-203ENST00000404404 ERICH3Q5RHP9 1530 aa26.38■■□□□ 1.81
RNF216P1-203ENST00000404404 IGF1RP08069 1367 aa26.3■■□□□ 1.8
RNF216P1-203ENST00000404404 VPS8Q8N3P4 1428 aa26.28■■□□□ 1.8
RNF216P1-203ENST00000404404 TOPBP1Q92547 1522 aa26.27■■□□□ 1.8
RNF216P1-203ENST00000404404 DNMBPQ6XZF7 1577 aa26.26■■□□□ 1.79
RNF216P1-203ENST00000404404 RAD54L2Q9Y4B4 1467 aa26.26■■□□□ 1.79
RNF216P1-203ENST00000404404 LAMC3Q9Y6N6 1575 aa26.25■■□□□ 1.79
RNF216P1-203ENST00000404404 POLA1P09884 1462 aaPredicted RBP26.21■■□□□ 1.79
RNF216P1-203ENST00000404404 URB2Q14146 1524 aaKnown RBP26.18■■□□□ 1.78
RNF216P1-203ENST00000404404 ARAP1Q96P48 1450 aa26.17■■□□□ 1.78
RNF216P1-203ENST00000404404 CARMIL1Q5VZK9 1371 aa26.15■■□□□ 1.78
RNF216P1-203ENST00000404404 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.12■■□□□ 1.77
RNF216P1-203ENST00000404404 ABCA10Q8WWZ4 1543 aa26.11■■□□□ 1.77
RNF216P1-203ENST00000404404 PDS5BQ9NTI5 1447 aa26.09■■□□□ 1.77
RNF216P1-203ENST00000404404 ZEB1P37275 1124 aaPredicted RBP26.07■■□□□ 1.76
RNF216P1-203ENST00000404404 KIF21AQ7Z4S6 1674 aa26.06■■□□□ 1.76
RNF216P1-203ENST00000404404 ARHGAP35Q9NRY4 1499 aa26.06■■□□□ 1.76
RNF216P1-203ENST00000404404 APLP2Q06481 763 aa26.04■■□□□ 1.76
RNF216P1-203ENST00000404404 TDRD9Q8NDG6 1382 aaKnown RBP25.96■■□□□ 1.75
RNF216P1-203ENST00000404404 WDR97A6NE52 1622 aa25.94■■□□□ 1.74
RNF216P1-203ENST00000404404 KANK4Q5T7N3 995 aaPredicted RBP25.94■■□□□ 1.74
RNF216P1-203ENST00000404404 CCER1Q8TC90 406 aaPredicted RBP25.94■■□□□ 1.74
RNF216P1-203ENST00000404404 HNRNPUL2Q1KMD3 747 aaKnown RBP25.87■■□□□ 1.73
RNF216P1-203ENST00000404404 ABCA5Q8WWZ7 1642 aa25.85■■□□□ 1.73
RNF216P1-203ENST00000404404 P3H3Q8IVL6 736 aa25.83■■□□□ 1.72
RNF216P1-203ENST00000404404 GAPVD1Q14C86 1478 aa25.82■■□□□ 1.72
RNF216P1-203ENST00000404404 CUL7Q14999 1698 aa25.82■■□□□ 1.72
RNF216P1-203ENST00000404404 TARBP1Q13395 1621 aaKnown RBP25.8■■□□□ 1.72
RNF216P1-203ENST00000404404 MRC2Q9UBG0 1479 aa25.75■■□□□ 1.71
RNF216P1-203ENST00000404404 FHOD3Q2V2M9 1422 aa25.7■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms