Protein–RNA interactions for Protein: Q8IYB8

SUPV3L1, ATP-dependent RNA helicase SUPV3L1, mitochondrial, humanhuman

Known RBP eCLIP

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUPV3L1Q8IYB8 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.453e-7■■■■■ 46
SUPV3L1Q8IYB8 DPY30-206ENST00000446765 1519 ntTSL 53.52□□□□□ -1.853e-7■■■■■ 46
SUPV3L1Q8IYB8 RNU6-32P-201ENST00000383948 107 ntBASIC0.34□□□□□ -2.363e-7■■■■■ 46
SUPV3L1Q8IYB8 SAFB2-209ENST00000591123 836 ntTSL 511.25□□□□□ -0.615e-6■■■■■ 45.7
SUPV3L1Q8IYB8 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC22.38■■□□□ 1.173e-6■■■■■ 45.3
SUPV3L1Q8IYB8 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.923e-6■■■■■ 45.3
SUPV3L1Q8IYB8 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.113e-6■■■■■ 45.3
SUPV3L1Q8IYB8 DAZAP1-209ENST00000590419 508 ntTSL 313.71□□□□□ -0.219e-7■■■■■ 45.2
SUPV3L1Q8IYB8 FDFT1-203ENST00000446331 1558 ntTSL 222.72■■□□□ 1.235e-17■■■■■ 44.8
SUPV3L1Q8IYB8 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.085e-17■■■■■ 44.8
SUPV3L1Q8IYB8 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.57■□□□□ 0.885e-17■■■■■ 44.8
SUPV3L1Q8IYB8 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.98■□□□□ 0.635e-17■■■■■ 44.8
SUPV3L1Q8IYB8 FDFT1-207ENST00000525607 1773 ntTSL 218.05■□□□□ 0.485e-17■■■■■ 44.8
SUPV3L1Q8IYB8 FDFT1-206ENST00000525571 810 ntTSL 317.24■□□□□ 0.355e-17■■■■■ 44.8
SUPV3L1Q8IYB8 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.295e-17■■■■■ 44.8
SUPV3L1Q8IYB8 FDFT1-217ENST00000530337 741 ntTSL 316.44■□□□□ 0.225e-17■■■■■ 44.8
SUPV3L1Q8IYB8 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.025e-17■■■■■ 44.8
SUPV3L1Q8IYB8 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC14.43□□□□□ -0.15e-17■■■■■ 44.8
SUPV3L1Q8IYB8 FDFT1-215ENST00000529464 932 ntTSL 1 (best)13.32□□□□□ -0.285e-17■■■■■ 44.8
SUPV3L1Q8IYB8 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC13.03□□□□□ -0.325e-17■■■■■ 44.8
SUPV3L1Q8IYB8 FDFT1-204ENST00000525283 898 ntTSL 311.75□□□□□ -0.535e-17■■■■■ 44.8
SUPV3L1Q8IYB8 FDFT1-211ENST00000527045 642 ntTSL 1 (best)7.97□□□□□ -1.135e-17■■■■■ 44.8
SUPV3L1Q8IYB8 FDFT1-222ENST00000538689 2289 ntTSL 2 BASIC6.84□□□□□ -1.315e-17■■■■■ 44.8
SUPV3L1Q8IYB8 AKAP8-205ENST00000599883 860 ntTSL 518.75■□□□□ 0.595e-7■■■■■ 44.8
SUPV3L1Q8IYB8 AKAP8-202ENST00000537303 1350 ntTSL 216.09■□□□□ 0.175e-7■■■■■ 44.8
SUPV3L1Q8IYB8 AKAP8-201ENST00000269701 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.275e-7■■■■■ 44.8
SUPV3L1Q8IYB8 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.893e-7■■■■■ 44.6
SUPV3L1Q8IYB8 ANKRD11-204ENST00000378332 1982 ntTSL 220.3■□□□□ 0.843e-7■■■■■ 44.6
SUPV3L1Q8IYB8 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.193e-7■■■■■ 44.6
SUPV3L1Q8IYB8 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.263e-7■■■■■ 44.6
SUPV3L1Q8IYB8 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.734e-9■■■■■ 44.3
SUPV3L1Q8IYB8 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.364e-9■■■■■ 44.3
SUPV3L1Q8IYB8 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.334e-9■■■■■ 44.3
SUPV3L1Q8IYB8 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.074e-9■■■■■ 44.3
SUPV3L1Q8IYB8 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.264e-9■■■■■ 44.3
SUPV3L1Q8IYB8 RBM4-202ENST00000396053 1337 ntTSL 2 BASIC12.01□□□□□ -0.491e-6■■■■■ 44.3
SUPV3L1Q8IYB8 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC15.59■□□□□ 0.093e-9■■■■■ 44.3
SUPV3L1Q8IYB8 AKAP8-203ENST00000595416 557 ntTSL 319.44■□□□□ 0.77e-7■■■■■ 44.2
SUPV3L1Q8IYB8 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC15.57■□□□□ 0.082e-6■■■■■ 44.1
SUPV3L1Q8IYB8 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.13e-6■■■■■ 44.1
SUPV3L1Q8IYB8 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.13e-6■■■■■ 44.1
SUPV3L1Q8IYB8 HNRNPH1-240ENST00000521720 539 ntTSL 315.6■□□□□ 0.097e-8■■■■■ 43.9
SUPV3L1Q8IYB8 HNRNPH1-205ENST00000502632 1509 ntTSL 214.57□□□□□ -0.087e-8■■■■■ 43.9
SUPV3L1Q8IYB8 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.47■□□□□ 0.715e-6■■■■■ 43.9
SUPV3L1Q8IYB8 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.09■□□□□ 0.655e-6■■■■■ 43.9
SUPV3L1Q8IYB8 GOLGA4-209ENST00000450863 1617 ntTSL 518.48■□□□□ 0.555e-6■■■■■ 43.9
SUPV3L1Q8IYB8 GOLGA4-203ENST00000419177 760 ntTSL 315.68■□□□□ 0.15e-6■■■■■ 43.9
SUPV3L1Q8IYB8 GOLGA4-204ENST00000429018 2036 ntTSL 1 (best)15.39■□□□□ 0.055e-6■■■■■ 43.9
SUPV3L1Q8IYB8 GOLGA4-205ENST00000431105 568 ntTSL 313.84□□□□□ -0.195e-6■■■■■ 43.9
SUPV3L1Q8IYB8 GOLGA4-201ENST00000356847 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.555e-6■■■■■ 43.9
SUPV3L1Q8IYB8 GOLGA4-202ENST00000361924 7772 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.585e-6■■■■■ 43.9
SUPV3L1Q8IYB8 GOLGA4-206ENST00000435830 4152 ntTSL 1 (best)10.16□□□□□ -0.785e-6■■■■■ 43.9
SUPV3L1Q8IYB8 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.18e-7■■■■■ 43.8
SUPV3L1Q8IYB8 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC24.4■■□□□ 1.52e-6■■■■■ 43.7
SUPV3L1Q8IYB8 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC22.92■■□□□ 1.262e-6■■■■■ 43.7
SUPV3L1Q8IYB8 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC22.89■■□□□ 1.262e-6■■■■■ 43.7
SUPV3L1Q8IYB8 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC22.04■■□□□ 1.122e-6■■■■■ 43.7
SUPV3L1Q8IYB8 DAZAP1-204ENST00000586579 619 ntTSL 321.46■■□□□ 1.032e-6■■■■■ 43.7
SUPV3L1Q8IYB8 DAZAP1-210ENST00000592453 1021 ntTSL 514.37□□□□□ -0.112e-6■■■■■ 43.7
SUPV3L1Q8IYB8 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC24.77■■□□□ 1.567e-7■■■■■ 43.5
SUPV3L1Q8IYB8 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.57e-7■■■■■ 43.5
SUPV3L1Q8IYB8 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.137e-7■■■■■ 43.5
SUPV3L1Q8IYB8 SNRNP70-204ENST00000595231 1673 ntTSL 1 (best)21.53■■□□□ 1.047e-7■■■■■ 43.5
SUPV3L1Q8IYB8 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC21.52■■□□□ 1.047e-7■■■■■ 43.5
SUPV3L1Q8IYB8 SNRNP70-209ENST00000601065 1757 ntTSL 321.14■□□□□ 0.977e-7■■■■■ 43.5
SUPV3L1Q8IYB8 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.77e-7■■■■■ 43.5
SUPV3L1Q8IYB8 EPRS-204ENST00000477030 1526 ntTSL 1 (best)19.34■□□□□ 0.697e-7■■■■■ 43.5
SUPV3L1Q8IYB8 SNRNP70-202ENST00000401730 3144 ntTSL 217.55■□□□□ 0.47e-7■■■■■ 43.5
SUPV3L1Q8IYB8 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.377e-7■■■■■ 43.5
SUPV3L1Q8IYB8 EIF4A1-222ENST00000582050 576 ntTSL 517.16■□□□□ 0.347e-7■■■■■ 43.5
SUPV3L1Q8IYB8 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.37e-7■■■■■ 43.5
SUPV3L1Q8IYB8 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.95■□□□□ 0.37e-7■■■■■ 43.5
SUPV3L1Q8IYB8 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.53■□□□□ 0.247e-7■■■■■ 43.5
SUPV3L1Q8IYB8 SNRNP70-203ENST00000544278 3221 ntTSL 1 (best)15.96■□□□□ 0.157e-7■■■■■ 43.5
SUPV3L1Q8IYB8 EIF4A1-207ENST00000578324 1577 ntTSL 515.86■□□□□ 0.137e-7■■■■■ 43.5
SUPV3L1Q8IYB8 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC15.42■□□□□ 0.067e-7■■■■■ 43.5
SUPV3L1Q8IYB8 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.017e-7■■■■■ 43.5
SUPV3L1Q8IYB8 EIF4A1-228ENST00000583389 951 ntTSL 313.89□□□□□ -0.197e-7■■■■■ 43.5
SUPV3L1Q8IYB8 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.227e-7■■■■■ 43.5
SUPV3L1Q8IYB8 VARS-228ENST00000495010 1007 ntTSL 513.19□□□□□ -0.37e-7■■■■■ 43.5
SUPV3L1Q8IYB8 VARS-227ENST00000489979 658 ntTSL 312.9□□□□□ -0.347e-7■■■■■ 43.5
SUPV3L1Q8IYB8 TCERG1-202ENST00000394421 3633 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.537e-7■■■■■ 43.5
SUPV3L1Q8IYB8 PLOD1-205ENST00000465920 871 ntTSL 511.73□□□□□ -0.537e-7■■■■■ 43.5
SUPV3L1Q8IYB8 SDE2-201ENST00000272091 3975 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.547e-7■■■■■ 43.5
SUPV3L1Q8IYB8 RAB30-AS1-203ENST00000527627 504 ntTSL 311.45□□□□□ -0.587e-7■■■■■ 43.5
SUPV3L1Q8IYB8 SENP3-EIF4A1-201ENST00000614237 3519 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.627e-7■■■■■ 43.5
SUPV3L1Q8IYB8 AC016876.2-201ENST00000581621 4554 ntTSL 2 BASIC11.18□□□□□ -0.627e-7■■■■■ 43.5
SUPV3L1Q8IYB8 TCERG1-201ENST00000296702 4654 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.667e-7■■■■■ 43.5
SUPV3L1Q8IYB8 EPRS-206ENST00000609181 2968 ntTSL 1 (best)10.87□□□□□ -0.677e-7■■■■■ 43.5
SUPV3L1Q8IYB8 TCERG1-216ENST00000549332 3518 ntTSL 510.86□□□□□ -0.677e-7■■■■■ 43.5
SUPV3L1Q8IYB8 EIF4A1-225ENST00000582746 1645 ntTSL 5 BASIC10.8□□□□□ -0.687e-7■■■■■ 43.5
SUPV3L1Q8IYB8 RAB30-AS1-206ENST00000533528 340 ntTSL 59.3□□□□□ -0.927e-7■■■■■ 43.5
SUPV3L1Q8IYB8 PICALM-201ENST00000356360 1958 ntTSL 5 BASIC7.54□□□□□ -1.27e-7■■■■■ 43.5
SUPV3L1Q8IYB8 TCERG1-215ENST00000515203 576 ntTSL 56.44□□□□□ -1.387e-7■■■■■ 43.5
SUPV3L1Q8IYB8 PICALM-223ENST00000534412 811 ntTSL 55.47□□□□□ -1.537e-7■■■■■ 43.5
SUPV3L1Q8IYB8 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.557e-7■■■■■ 43.5
SUPV3L1Q8IYB8 PICALM-216ENST00000531771 631 ntTSL 34.82□□□□□ -1.647e-7■■■■■ 43.5
SUPV3L1Q8IYB8 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.19□□□□□ -1.97e-7■■■■■ 43.5
SUPV3L1Q8IYB8 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.391e-8■■■■■ 43.5
SUPV3L1Q8IYB8 PPP6R1-206ENST00000591323 848 ntTSL 315.02■□□□□ -01e-8■■■■■ 43.5
Retrieved 100 of 12,391 protein–RNA pairs in 62.6 ms