RNA–Protein interactions for RNA: ENST00000397786.6

MED13-201, Transcript of mediator complex subunit 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MED13, Length 10,465 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED13-201ENST00000397786 NISCHQ9Y2I1 1504 aa9.61□□□□□ -0.87
MED13-201ENST00000397786 DCAF8L2P0C7V8 631 aa8.84□□□□□ -0.99
MED13-201ENST00000397786 SHROOM4Q9ULL8 1493 aa8.76□□□□□ -1.01
MED13-201ENST00000397786 SUPT5HO00267 1087 aaKnown RBP8.75□□□□□ -1.01
MED13-201ENST00000397786 PCGF6Q9BYE7 350 aa8.34□□□□□ -1.07
MED13-201ENST00000397786 EHMT2Q96KQ7 1210 aa8.25□□□□□ -1.09
MED13-201ENST00000397786 CHIC1Q5VXU3 224 aa8.17□□□□□ -1.1
MED13-201ENST00000397786 FAM9AQ8IZU1 332 aaPredicted RBP8.17□□□□□ -1.1
MED13-201ENST00000397786 HRCP23327 699 aa8.16□□□□□ -1.1
MED13-201ENST00000397786 TRIM41Q8WV44 630 aa8.13□□□□□ -1.11
MED13-201ENST00000397786 ZEB1P37275 1124 aaPredicted RBP8.1□□□□□ -1.11
MED13-201ENST00000397786 LOC105371045A0A1W2PR82 267 aa8.09□□□□□ -1.11
MED13-201ENST00000397786 CCDC180Q9P1Z9 1646 aa8.09□□□□□ -1.11
MED13-201ENST00000397786 TRIM26Q12899 539 aaPredicted RBP8.07□□□□□ -1.12
MED13-201ENST00000397786 ZCCHC6Q5VYS8 1495 aaKnown RBP8.04□□□□□ -1.12
MED13-201ENST00000397786 PPARGC1BQ86YN6 1023 aaKnown RBP8□□□□□ -1.13
MED13-201ENST00000397786 TTBK1Q5TCY1 1321 aaPredicted RBP7.99□□□□□ -1.13
MED13-201ENST00000397786 CCER1Q8TC90 406 aaPredicted RBP7.98□□□□□ -1.13
MED13-201ENST00000397786 APLP2Q06481 763 aa7.93□□□□□ -1.14
MED13-201ENST00000397786 MYO15BQ96JP2 1530 aa7.9□□□□□ -1.14
MED13-201ENST00000397786 CENPBP07199 599 aaPredicted RBP7.89□□□□□ -1.15
MED13-201ENST00000397786 UBTFP17480 764 aaKnown RBP7.89□□□□□ -1.15
MED13-201ENST00000397786 PELP1Q8IZL8 1130 aaKnown RBP7.88□□□□□ -1.15
MED13-201ENST00000397786 DCAF1Q9Y4B6 1507 aa7.86□□□□□ -1.15
MED13-201ENST00000397786 SCRIBQ14160 1630 aa7.84□□□□□ -1.15
MED13-201ENST00000397786 RANGAP1P46060 587 aaPredicted RBP7.82□□□□□ -1.16
MED13-201ENST00000397786 ABCC9O60706 1549 aa7.78□□□□□ -1.16
MED13-201ENST00000397786 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.77□□□□□ -1.17
MED13-201ENST00000397786 YTHDC1Q96MU7 727 aaKnown RBP7.74□□□□□ -1.17
MED13-201ENST00000397786 DIEXFQ68CQ4 756 aaKnown RBP7.71□□□□□ -1.17
MED13-201ENST00000397786 HNRNPUL2Q1KMD3 747 aaKnown RBP7.69□□□□□ -1.18
MED13-201ENST00000397786 ATP1B4Q9UN42 357 aaPredicted RBP7.65□□□□□ -1.18
MED13-201ENST00000397786 RSF1Q96T23 1441 aaPredicted RBP7.65□□□□□ -1.18
MED13-201ENST00000397786 RB1CC1Q8TDY2 1594 aa7.63□□□□□ -1.19
MED13-201ENST00000397786 MYT1Q01538 1121 aa7.62□□□□□ -1.19
MED13-201ENST00000397786 PABPN1Q86U42 306 aaKnown RBP eCLIP7.6□□□□□ -1.19
MED13-201ENST00000397786 GTF3C3Q9Y5Q9 886 aa7.59□□□□□ -1.19
MED13-201ENST00000397786 NACADO15069 1562 aa7.59□□□□□ -1.19
MED13-201ENST00000397786 ITGAEP38570 1179 aa7.59□□□□□ -1.2
MED13-201ENST00000397786 ACIN1Q9UKV3 1341 aaKnown RBP7.57□□□□□ -1.2
MED13-201ENST00000397786 CSRNP3Q8WYN3 585 aa7.57□□□□□ -1.2
MED13-201ENST00000397786 ZNF316A6NFI3 1004 aaPredicted RBP7.57□□□□□ -1.2
MED13-201ENST00000397786 NEFLP07196 543 aa7.53□□□□□ -1.2
MED13-201ENST00000397786 SCAF1Q9H7N4 1312 aaKnown RBP7.53□□□□□ -1.2
MED13-201ENST00000397786 WIZO95785 1651 aa7.51□□□□□ -1.21
MED13-201ENST00000397786 CECR2Q9BXF3 1484 aa7.5□□□□□ -1.21
MED13-201ENST00000397786 NEUROD1Q13562 356 aa7.48□□□□□ -1.21
MED13-201ENST00000397786 BAZ1AQ9NRL2 1556 aaPredicted RBP7.47□□□□□ -1.21
MED13-201ENST00000397786 MROH2BQ7Z745 1585 aa7.47□□□□□ -1.21
MED13-201ENST00000397786 ERICH6Q7L0X2 663 aa7.47□□□□□ -1.21
MED13-201ENST00000397786 CEP162Q5TB80 1403 aa7.46□□□□□ -1.22
MED13-201ENST00000397786 FAM50AQ14320 339 aaKnown RBP7.44□□□□□ -1.22
MED13-201ENST00000397786 EEA1Q15075 1411 aa7.43□□□□□ -1.22
MED13-201ENST00000397786 GOLGA3Q08378 1498 aa7.42□□□□□ -1.22
MED13-201ENST00000397786 ABCC8Q09428 1581 aa7.42□□□□□ -1.22
MED13-201ENST00000397786 TNIKQ9UKE5 1360 aa7.41□□□□□ -1.22
MED13-201ENST00000397786 CLIP1P30622 1438 aa7.39□□□□□ -1.23
MED13-201ENST00000397786 MIER1Q8N108 512 aa7.38□□□□□ -1.23
MED13-201ENST00000397786 CCDC88BA6NC98 1476 aa7.37□□□□□ -1.23
MED13-201ENST00000397786 WRNQ14191 1432 aaPredicted RBP eCLIP7.37□□□□□ -1.23
MED13-201ENST00000397786 SOGA1O94964 1423 aa7.36□□□□□ -1.23
MED13-201ENST00000397786 CEP164Q9UPV0 1460 aa7.36□□□□□ -1.23
MED13-201ENST00000397786 TOP2AP11388 1531 aaKnown RBP7.35□□□□□ -1.23
MED13-201ENST00000397786 ANP32CO43423 234 aa7.34□□□□□ -1.23
MED13-201ENST00000397786 BCANQ96GW7 911 aa7.33□□□□□ -1.24
MED13-201ENST00000397786 P3H3Q8IVL6 736 aa7.33□□□□□ -1.24
MED13-201ENST00000397786 SMARCA4P51532 1647 aa7.33□□□□□ -1.24
MED13-201ENST00000397786 CLSPNQ9HAW4 1339 aa7.32□□□□□ -1.24
MED13-201ENST00000397786 BAZ1BQ9UIG0 1483 aaKnown RBP7.32□□□□□ -1.24
MED13-201ENST00000397786 POLR3GLQ9BT43 218 aa7.32□□□□□ -1.24
MED13-201ENST00000397786 TRIM52Q96A61 297 aa7.3□□□□□ -1.24
MED13-201ENST00000397786 CNGB1Q14028 1251 aaPredicted RBP7.29□□□□□ -1.24
MED13-201ENST00000397786 DDX10Q13206 875 aaKnown RBP7.28□□□□□ -1.24
MED13-201ENST00000397786 SMARCA2P51531 1590 aa7.26□□□□□ -1.25
MED13-201ENST00000397786 FKBP8Q14318 412 aa7.25□□□□□ -1.25
MED13-201ENST00000397786 RUSC2Q8N2Y8 1516 aa7.25□□□□□ -1.25
MED13-201ENST00000397786 VPS8Q8N3P4 1428 aa7.25□□□□□ -1.25
MED13-201ENST00000397786 KIF27Q86VH2 1401 aa7.24□□□□□ -1.25
MED13-201ENST00000397786 CDK11AQ9UQ88 783 aaPredicted RBP7.24□□□□□ -1.25
MED13-201ENST00000397786 TONSLQ96HA7 1378 aa7.23□□□□□ -1.25
MED13-201ENST00000397786 UNC13AQ9UPW8 1703 aa7.22□□□□□ -1.25
MED13-201ENST00000397786 HIRIP3Q9BW71 556 aaPredicted RBP7.2□□□□□ -1.26
MED13-201ENST00000397786 CCNB3Q8WWL7 1395 aa7.2□□□□□ -1.26
MED13-201ENST00000397786 RAPGEF2Q9Y4G8 1499 aa7.19□□□□□ -1.26
MED13-201ENST00000397786 HNRNPUQ00839 825 aaKnown RBP eCLIP7.17□□□□□ -1.26
MED13-201ENST00000397786 MTUS2Q5JR59 1369 aa7.17□□□□□ -1.26
MED13-201ENST00000397786 ARID3CA6NKF2 412 aa7.17□□□□□ -1.26
MED13-201ENST00000397786 KANK4Q5T7N3 995 aaPredicted RBP7.17□□□□□ -1.26
MED13-201ENST00000397786 ZNF326Q5BKZ1 582 aaKnown RBP7.16□□□□□ -1.26
MED13-201ENST00000397786 KIF21BO75037 1637 aa7.16□□□□□ -1.26
MED13-201ENST00000397786 SUPT16HQ9Y5B9 1047 aaKnown RBP7.15□□□□□ -1.26
MED13-201ENST00000397786 DAXXQ9UER7 740 aaPredicted RBP7.14□□□□□ -1.27
MED13-201ENST00000397786 SIN3AQ96ST3 1273 aa7.14□□□□□ -1.27
MED13-201ENST00000397786 ATAD2BQ9ULI0 1458 aa7.14□□□□□ -1.27
MED13-201ENST00000397786 CHIC2Q9UKJ5 165 aa7.14□□□□□ -1.27
MED13-201ENST00000397786 CUX2O14529 1486 aa7.13□□□□□ -1.27
MED13-201ENST00000397786 FHAD1B1AJZ9 1412 aa7.13□□□□□ -1.27
MED13-201ENST00000397786 SYNJ1O43426 1573 aa7.12□□□□□ -1.27
MED13-201ENST00000397786 FAM9BQ8IZU0 186 aa7.12□□□□□ -1.27
MED13-201ENST00000397786 CARMIL1Q5VZK9 1371 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms