RNA–Protein interactions for RNA: ENST00000394421.6

TCERG1-202, Transcript of transcription elongation regulator 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCERG1, Length 3,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCERG1-202ENST00000394421 NISCHQ9Y2I1 1504 aa24.19■■□□□ 1.46
TCERG1-202ENST00000394421 DCAF8L2P0C7V8 631 aa21.5■■□□□ 1.03
TCERG1-202ENST00000394421 SHROOM4Q9ULL8 1493 aa21.35■■□□□ 1.01
TCERG1-202ENST00000394421 SUPT5HO00267 1087 aaKnown RBP20.93■□□□□ 0.94
TCERG1-202ENST00000394421 CCDC180Q9P1Z9 1646 aa20.31■□□□□ 0.84
TCERG1-202ENST00000394421 ZCCHC6Q5VYS8 1495 aaKnown RBP20.28■□□□□ 0.84
TCERG1-202ENST00000394421 ABCC9O60706 1549 aa19.98■□□□□ 0.79
TCERG1-202ENST00000394421 CHIC1Q5VXU3 224 aa19.7■□□□□ 0.74
TCERG1-202ENST00000394421 EHMT2Q96KQ7 1210 aa19.64■□□□□ 0.74
TCERG1-202ENST00000394421 SCRIBQ14160 1630 aa19.61■□□□□ 0.73
TCERG1-202ENST00000394421 FAM9AQ8IZU1 332 aaPredicted RBP19.5■□□□□ 0.71
TCERG1-202ENST00000394421 DCAF1Q9Y4B6 1507 aa19.47■□□□□ 0.71
TCERG1-202ENST00000394421 LOC105371045A0A1W2PR82 267 aa19.4■□□□□ 0.7
TCERG1-202ENST00000394421 PABPN1Q86U42 306 aaKnown RBP eCLIP19.34■□□□□ 0.69
TCERG1-202ENST00000394421 TRIM41Q8WV44 630 aa19.33■□□□□ 0.69
TCERG1-202ENST00000394421 MYO15BQ96JP2 1530 aa19.26■□□□□ 0.67
TCERG1-202ENST00000394421 PCGF6Q9BYE7 350 aa19.21■□□□□ 0.67
TCERG1-202ENST00000394421 RSF1Q96T23 1441 aaPredicted RBP19.18■□□□□ 0.66
TCERG1-202ENST00000394421 CECR2Q9BXF3 1484 aa19.12■□□□□ 0.65
TCERG1-202ENST00000394421 NACADO15069 1562 aa19.12■□□□□ 0.65
TCERG1-202ENST00000394421 RB1CC1Q8TDY2 1594 aa19■□□□□ 0.63
TCERG1-202ENST00000394421 MROH2BQ7Z745 1585 aa18.91■□□□□ 0.62
TCERG1-202ENST00000394421 PPARGC1BQ86YN6 1023 aaKnown RBP18.89■□□□□ 0.62
TCERG1-202ENST00000394421 TTBK1Q5TCY1 1321 aaPredicted RBP18.87■□□□□ 0.61
TCERG1-202ENST00000394421 WIZO95785 1651 aa18.75■□□□□ 0.59
TCERG1-202ENST00000394421 RANGAP1P46060 587 aaPredicted RBP18.72■□□□□ 0.59
TCERG1-202ENST00000394421 UBTFP17480 764 aaKnown RBP18.64■□□□□ 0.58
TCERG1-202ENST00000394421 BAZ1AQ9NRL2 1556 aaPredicted RBP18.63■□□□□ 0.57
TCERG1-202ENST00000394421 HRCP23327 699 aa18.6■□□□□ 0.57
TCERG1-202ENST00000394421 TRIM26Q12899 539 aaPredicted RBP18.6■□□□□ 0.57
TCERG1-202ENST00000394421 CCDC88BA6NC98 1476 aa18.46■□□□□ 0.55
TCERG1-202ENST00000394421 SMARCA4P51532 1647 aa18.42■□□□□ 0.54
TCERG1-202ENST00000394421 ABCC8Q09428 1581 aa18.42■□□□□ 0.54
TCERG1-202ENST00000394421 CSRNP3Q8WYN3 585 aa18.34■□□□□ 0.53
TCERG1-202ENST00000394421 TOP2AP11388 1531 aaKnown RBP18.33■□□□□ 0.53
TCERG1-202ENST00000394421 UNC13AQ9UPW8 1703 aa18.33■□□□□ 0.52
TCERG1-202ENST00000394421 BAZ1BQ9UIG0 1483 aaKnown RBP18.29■□□□□ 0.52
TCERG1-202ENST00000394421 SOGA1O94964 1423 aa18.27■□□□□ 0.52
TCERG1-202ENST00000394421 BICRAQ9NZM4 1560 aa18.27■□□□□ 0.52
TCERG1-202ENST00000394421 APLP2Q06481 763 aa18.24■□□□□ 0.51
TCERG1-202ENST00000394421 SMARCA2P51531 1590 aa18.22■□□□□ 0.51
TCERG1-202ENST00000394421 CCER1Q8TC90 406 aaPredicted RBP18.22■□□□□ 0.51
TCERG1-202ENST00000394421 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.21■□□□□ 0.5
TCERG1-202ENST00000394421 WRNQ14191 1432 aaPredicted RBP eCLIP18.19■□□□□ 0.5
TCERG1-202ENST00000394421 ATAD2BQ9ULI0 1458 aa18.19■□□□□ 0.5
TCERG1-202ENST00000394421 RUSC2Q8N2Y8 1516 aa18.15■□□□□ 0.5
TCERG1-202ENST00000394421 HNRNPUL2Q1KMD3 747 aaKnown RBP18.08■□□□□ 0.48
TCERG1-202ENST00000394421 ATP1B4Q9UN42 357 aaPredicted RBP18.06■□□□□ 0.48
TCERG1-202ENST00000394421 ZEB1P37275 1124 aaPredicted RBP18.04■□□□□ 0.48
TCERG1-202ENST00000394421 CEP162Q5TB80 1403 aa18.04■□□□□ 0.48
TCERG1-202ENST00000394421 TNIKQ9UKE5 1360 aa17.92■□□□□ 0.46
TCERG1-202ENST00000394421 GOLGA3Q08378 1498 aa17.9■□□□□ 0.46
TCERG1-202ENST00000394421 ITGAEP38570 1179 aa17.9■□□□□ 0.46
TCERG1-202ENST00000394421 EEA1Q15075 1411 aa17.89■□□□□ 0.46
TCERG1-202ENST00000394421 EIF4G1Q04637 1599 aaKnown RBP17.89■□□□□ 0.45
TCERG1-202ENST00000394421 P3H3Q8IVL6 736 aa17.87■□□□□ 0.45
TCERG1-202ENST00000394421 CLIP1P30622 1438 aa17.86■□□□□ 0.45
TCERG1-202ENST00000394421 SYNJ1O43426 1573 aa17.84■□□□□ 0.45
TCERG1-202ENST00000394421 CEP164Q9UPV0 1460 aa17.8■□□□□ 0.44
TCERG1-202ENST00000394421 NCAPD3P42695 1498 aa17.78■□□□□ 0.44
TCERG1-202ENST00000394421 RAPGEF2Q9Y4G8 1499 aa17.77■□□□□ 0.44
TCERG1-202ENST00000394421 PEG3Q9GZU2 1588 aa17.77■□□□□ 0.44
TCERG1-202ENST00000394421 KIF27Q86VH2 1401 aa17.69■□□□□ 0.42
TCERG1-202ENST00000394421 DNAJC5BQ9UF47 199 aa17.68■□□□□ 0.42
TCERG1-202ENST00000394421 CADPSQ9ULU8 1353 aa17.67■□□□□ 0.42
TCERG1-202ENST00000394421 CUX2O14529 1486 aa17.66■□□□□ 0.42
TCERG1-202ENST00000394421 HMGXB3Q12766 1538 aa17.59■□□□□ 0.41
TCERG1-202ENST00000394421 KANK4Q5T7N3 995 aaPredicted RBP17.58■□□□□ 0.41
TCERG1-202ENST00000394421 CFTRP13569 1480 aa17.58■□□□□ 0.4
TCERG1-202ENST00000394421 CC2D2AQ9P2K1 1620 aa17.58■□□□□ 0.4
TCERG1-202ENST00000394421 FAM50AQ14320 339 aaKnown RBP17.58■□□□□ 0.4
TCERG1-202ENST00000394421 CUX1P39880 1505 aa17.57■□□□□ 0.4
TCERG1-202ENST00000394421 ARID3CA6NKF2 412 aa17.56■□□□□ 0.4
TCERG1-202ENST00000394421 VPS8Q8N3P4 1428 aa17.56■□□□□ 0.4
TCERG1-202ENST00000394421 NESP48681 1621 aa17.55■□□□□ 0.4
TCERG1-202ENST00000394421 CARMIL1Q5VZK9 1371 aa17.53■□□□□ 0.4
TCERG1-202ENST00000394421 TOP2BQ02880 1626 aa17.53■□□□□ 0.4
TCERG1-202ENST00000394421 DIEXFQ68CQ4 756 aaKnown RBP17.5■□□□□ 0.39
TCERG1-202ENST00000394421 FANCD2Q9BXW9 1451 aa17.5■□□□□ 0.39
TCERG1-202ENST00000394421 YTHDC1Q96MU7 727 aaKnown RBP17.48■□□□□ 0.39
TCERG1-202ENST00000394421 TDRD9Q8NDG6 1382 aaKnown RBP17.47■□□□□ 0.39
TCERG1-202ENST00000394421 FGD5Q6ZNL6 1462 aa17.47■□□□□ 0.39
TCERG1-202ENST00000394421 RAD54L2Q9Y4B4 1467 aa17.46■□□□□ 0.39
TCERG1-202ENST00000394421 IGF1RP08069 1367 aa17.45■□□□□ 0.38
TCERG1-202ENST00000394421 FBLN2P98095 1184 aa17.44■□□□□ 0.38
TCERG1-202ENST00000394421 KIF21BO75037 1637 aa17.44■□□□□ 0.38
TCERG1-202ENST00000394421 PRXQ9BXM0 1461 aa17.39■□□□□ 0.37
TCERG1-202ENST00000394421 NEUROD1Q13562 356 aa17.35■□□□□ 0.37
TCERG1-202ENST00000394421 ARAP1Q96P48 1450 aa17.35■□□□□ 0.37
TCERG1-202ENST00000394421 ZNF316A6NFI3 1004 aaPredicted RBP17.34■□□□□ 0.37
TCERG1-202ENST00000394421 BIVM-ERCC5R4GMW8 1640 aa17.32■□□□□ 0.36
TCERG1-202ENST00000394421 FHOD3Q2V2M9 1422 aa17.28■□□□□ 0.36
TCERG1-202ENST00000394421 PDS5BQ9NTI5 1447 aa17.28■□□□□ 0.36
TCERG1-202ENST00000394421 ARHGAP35Q9NRY4 1499 aa17.26■□□□□ 0.35
TCERG1-202ENST00000394421 ERICH3Q5RHP9 1530 aa17.25■□□□□ 0.35
TCERG1-202ENST00000394421 POLA1P09884 1462 aaPredicted RBP17.24■□□□□ 0.35
TCERG1-202ENST00000394421 TOPBP1Q92547 1522 aa17.24■□□□□ 0.35
TCERG1-202ENST00000394421 CCNB3Q8WWL7 1395 aa17.22■□□□□ 0.35
TCERG1-202ENST00000394421 MTUS2Q5JR59 1369 aa17.2■□□□□ 0.34
TCERG1-202ENST00000394421 CENPBP07199 599 aaPredicted RBP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms