RNA–Protein interactions for RNA: ENST00000376007.8

PRRC2A-201, Transcript of proline rich coiled-coil 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRRC2A, Length 6,861 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRRC2A-201ENST00000376007 DCAF8L2P0C7V8 631 aa32.51■■■□□ 2.79
PRRC2A-201ENST00000376007 FAM9AQ8IZU1 332 aaPredicted RBP30.34■■■□□ 2.45
PRRC2A-201ENST00000376007 APLP2Q06481 763 aa29.38■■■□□ 2.29
PRRC2A-201ENST00000376007 SUPT5HO00267 1087 aaKnown RBP29.33■■■□□ 2.29
PRRC2A-201ENST00000376007 EHMT2Q96KQ7 1210 aa28.99■■■□□ 2.23
PRRC2A-201ENST00000376007 PELP1Q8IZL8 1130 aaKnown RBP28.92■■■□□ 2.22
PRRC2A-201ENST00000376007 NISCHQ9Y2I1 1504 aa28.68■■■□□ 2.18
PRRC2A-201ENST00000376007 SHROOM4Q9ULL8 1493 aa28.63■■■□□ 2.17
PRRC2A-201ENST00000376007 ATP1B4Q9UN42 357 aaPredicted RBP28.52■■■□□ 2.16
PRRC2A-201ENST00000376007 MYT1LQ9UL68 1186 aa28.38■■■□□ 2.13
PRRC2A-201ENST00000376007 RANGAP1P46060 587 aaPredicted RBP28.19■■■□□ 2.1
PRRC2A-201ENST00000376007 TTBK1Q5TCY1 1321 aaPredicted RBP27.91■■■□□ 2.06
PRRC2A-201ENST00000376007 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.77■■■□□ 2.04
PRRC2A-201ENST00000376007 HNRNPUL2Q1KMD3 747 aaKnown RBP27.77■■■□□ 2.04
PRRC2A-201ENST00000376007 CCER1Q8TC90 406 aaPredicted RBP27.73■■■□□ 2.03
PRRC2A-201ENST00000376007 ERICH6Q7L0X2 663 aa27.63■■■□□ 2.01
PRRC2A-201ENST00000376007 CHIC1Q5VXU3 224 aa27.55■■■□□ 2
PRRC2A-201ENST00000376007 UBTFP17480 764 aaKnown RBP27.54■■■□□ 2
PRRC2A-201ENST00000376007 TRIM41Q8WV44 630 aa27.34■■□□□ 1.97
PRRC2A-201ENST00000376007 SLC4A1APQ9BWU0 796 aaKnown RBP27.25■■□□□ 1.95
PRRC2A-201ENST00000376007 PCGF6Q9BYE7 350 aa27.15■■□□□ 1.94
PRRC2A-201ENST00000376007 NEFLP07196 543 aa27.09■■□□□ 1.93
PRRC2A-201ENST00000376007 POLR3GLQ9BT43 218 aa27.05■■□□□ 1.92
PRRC2A-201ENST00000376007 DAXXQ9UER7 740 aaPredicted RBP26.86■■□□□ 1.89
PRRC2A-201ENST00000376007 CENPBP07199 599 aaPredicted RBP26.83■■□□□ 1.88
PRRC2A-201ENST00000376007 BCANQ96GW7 911 aa26.81■■□□□ 1.88
PRRC2A-201ENST00000376007 ZEB1P37275 1124 aaPredicted RBP26.68■■□□□ 1.86
PRRC2A-201ENST00000376007 ESF1Q9H501 851 aaKnown RBP26.68■■□□□ 1.86
PRRC2A-201ENST00000376007 ITGAEP38570 1179 aa26.65■■□□□ 1.86
PRRC2A-201ENST00000376007 FBLN2P98095 1184 aa26.64■■□□□ 1.85
PRRC2A-201ENST00000376007 SLC24A1O60721 1099 aa26.54■■□□□ 1.84
PRRC2A-201ENST00000376007 CNGB1Q14028 1251 aaPredicted RBP26.4■■□□□ 1.82
PRRC2A-201ENST00000376007 ZBTB47Q9UFB7 747 aaPredicted RBP26.39■■□□□ 1.81
PRRC2A-201ENST00000376007 NPM1P06748 294 aaKnown RBP eCLIP26.29■■□□□ 1.8
PRRC2A-201ENST00000376007 PLPPR3Q6T4P5 718 aa26.28■■□□□ 1.8
PRRC2A-201ENST00000376007 NEFMP07197 916 aa26.28■■□□□ 1.8
PRRC2A-201ENST00000376007 CLSPNQ9HAW4 1339 aa26.27■■□□□ 1.8
PRRC2A-201ENST00000376007 TRIM52Q96A61 297 aa26.21■■□□□ 1.79
PRRC2A-201ENST00000376007 YTHDC1Q96MU7 727 aaKnown RBP26.16■■□□□ 1.78
PRRC2A-201ENST00000376007 PABPN1Q86U42 306 aaKnown RBP eCLIP26.15■■□□□ 1.783e-7■□□□□ 8.9
PRRC2A-201ENST00000376007 STAG3Q9UJ98 1225 aa26.15■■□□□ 1.78
PRRC2A-201ENST00000376007 FAM50AQ14320 339 aaKnown RBP26.05■■□□□ 1.76
PRRC2A-201ENST00000376007 ZNF316A6NFI3 1004 aaPredicted RBP26.03■■□□□ 1.76
PRRC2A-201ENST00000376007 PPARGC1BQ86YN6 1023 aaKnown RBP26.02■■□□□ 1.76
PRRC2A-201ENST00000376007 ABCC9O60706 1549 aa25.98■■□□□ 1.75
PRRC2A-201ENST00000376007 ZNF326Q5BKZ1 582 aaKnown RBP25.85■■□□□ 1.73
PRRC2A-201ENST00000376007 SCAF1Q9H7N4 1312 aaKnown RBP25.85■■□□□ 1.73
PRRC2A-201ENST00000376007 A0A0G2JS52 829 aa25.79■■□□□ 1.72
PRRC2A-201ENST00000376007 CANXP27824 592 aaKnown RBP25.75■■□□□ 1.71
PRRC2A-201ENST00000376007 CDK11AQ9UQ88 783 aaPredicted RBP25.72■■□□□ 1.71
PRRC2A-201ENST00000376007 CHGAP10645 457 aaKnown RBP25.7■■□□□ 1.71
PRRC2A-201ENST00000376007 BCL11AQ9H165 835 aa25.69■■□□□ 1.7
PRRC2A-201ENST00000376007 NPM2Q86SE8 214 aaKnown RBP25.68■■□□□ 1.7
PRRC2A-201ENST00000376007 MYT1Q01538 1121 aa25.65■■□□□ 1.7
PRRC2A-201ENST00000376007 ZNF777Q9ULD5 760 aaPredicted RBP25.65■■□□□ 1.7
PRRC2A-201ENST00000376007 ARID3CA6NKF2 412 aa25.57■■□□□ 1.68
PRRC2A-201ENST00000376007 HAP1P54257 671 aaPredicted RBP25.56■■□□□ 1.68
PRRC2A-201ENST00000376007 C14orf37Q86TY3 774 aa25.53■■□□□ 1.68
PRRC2A-201ENST00000376007 NEUROD1Q13562 356 aa25.47■■□□□ 1.67
PRRC2A-201ENST00000376007 RTL5Q5HYW3 569 aaPredicted RBP25.41■■□□□ 1.66
PRRC2A-201ENST00000376007 TRIM26Q12899 539 aaPredicted RBP25.38■■□□□ 1.65
PRRC2A-201ENST00000376007 ARID4BQ4LE39 1312 aaPredicted RBP25.38■■□□□ 1.65
PRRC2A-201ENST00000376007 ZBTB7CA1YPR0 619 aa25.33■■□□□ 1.64
PRRC2A-201ENST00000376007 PPP1R15AO75807 674 aaPredicted RBP25.28■■□□□ 1.64
PRRC2A-201ENST00000376007 CDK11BP21127 795 aaKnown RBP25.28■■□□□ 1.64
PRRC2A-201ENST00000376007 TRHP20396 242 aaPredicted RBP25.27■■□□□ 1.64
PRRC2A-201ENST00000376007 P3H3Q8IVL6 736 aa25.27■■□□□ 1.64
PRRC2A-201ENST00000376007 PLEKHG5O94827 1062 aa25.16■■□□□ 1.62
PRRC2A-201ENST00000376007 ANP32CO43423 234 aa25.15■■□□□ 1.62
PRRC2A-201ENST00000376007 CHMP7Q8WUX9 453 aaPredicted RBP25.14■■□□□ 1.62
PRRC2A-201ENST00000376007 NPHP1O15259 732 aa25.12■■□□□ 1.61
PRRC2A-201ENST00000376007 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.05■■□□□ 1.62e-7■■■■□ 22.7
PRRC2A-201ENST00000376007 ARXQ96QS3 562 aa24.98■■□□□ 1.59
PRRC2A-201ENST00000376007 AEBP2Q6ZN18 517 aaPredicted RBP24.93■■□□□ 1.58
PRRC2A-201ENST00000376007 TSPY4P0CV99 314 aa24.91■■□□□ 1.58
PRRC2A-201ENST00000376007 TSPY10P0CW01 314 aa24.91■■□□□ 1.58
PRRC2A-201ENST00000376007 HSP90AA1P07900 732 aaKnown RBP24.89■■□□□ 1.57
PRRC2A-201ENST00000376007 LMOD2Q6P5Q4 547 aa24.8■■□□□ 1.56
PRRC2A-201ENST00000376007 ANP32BQ92688 251 aaKnown RBP24.8■■□□□ 1.56
PRRC2A-201ENST00000376007 KCNH8Q96L42 1107 aa24.8■■□□□ 1.56
PRRC2A-201ENST00000376007 LOC105371045A0A1W2PR82 267 aa24.79■■□□□ 1.56
PRRC2A-201ENST00000376007 SENP3Q9H4L4 574 aaPredicted RBP24.77■■□□□ 1.56
PRRC2A-201ENST00000376007 MYH16Q9H6N6 1097 aa24.75■■□□□ 1.55
PRRC2A-201ENST00000376007 UPF2Q9HAU5 1272 aaKnown RBP24.73■■□□□ 1.55
PRRC2A-201ENST00000376007 ERCC6Q03468 1493 aa24.69■■□□□ 1.54
PRRC2A-201ENST00000376007 HRCP23327 699 aa24.66■■□□□ 1.54
PRRC2A-201ENST00000376007 TULP1O00294 542 aaPredicted RBP24.64■■□□□ 1.54
PRRC2A-201ENST00000376007 WDR43Q15061 677 aaKnown RBP eCLIP24.64■■□□□ 1.542e-6■□□□□ 8.5
PRRC2A-201ENST00000376007 EIF4G2P78344 907 aaKnown RBP eCLIP24.6■■□□□ 1.53
PRRC2A-201ENST00000376007 HDGFP51858 240 aaKnown RBP24.6■■□□□ 1.53
PRRC2A-201ENST00000376007 TMX4Q9H1E5 349 aaPredicted RBP24.58■■□□□ 1.53
PRRC2A-201ENST00000376007 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.57■■□□□ 1.52
PRRC2A-201ENST00000376007 PLEKHD1A6NEE1 506 aa24.56■■□□□ 1.52
PRRC2A-201ENST00000376007 DCAF8L1A6NGE4 600 aa24.54■■□□□ 1.52
PRRC2A-201ENST00000376007 TONSLQ96HA7 1378 aa24.54■■□□□ 1.52
PRRC2A-201ENST00000376007 GOLGA2Q08379 1002 aa24.53■■□□□ 1.52
PRRC2A-201ENST00000376007 DIEXFQ68CQ4 756 aaKnown RBP24.5■■□□□ 1.51
PRRC2A-201ENST00000376007 CSRNP3Q8WYN3 585 aa24.49■■□□□ 1.51
PRRC2A-201ENST00000376007 KDM2AQ9Y2K7 1162 aa24.47■■□□□ 1.51
PRRC2A-201ENST00000376007 TMC1Q8TDI8 760 aa24.46■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms