RNA–Protein interactions for RNA: ENST00000399537.8

TNRC18-203, Transcript of trinucleotide repeat containing 18, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TNRC18, Length 10,572 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-203ENST00000399537 DCAF8L2P0C7V8 631 aa24.33■■□□□ 1.49
TNRC18-203ENST00000399537 PELP1Q8IZL8 1130 aaKnown RBP23.27■■□□□ 1.32
TNRC18-203ENST00000399537 SUPT5HO00267 1087 aaKnown RBP23.13■■□□□ 1.29
TNRC18-203ENST00000399537 EHMT2Q96KQ7 1210 aa22.82■■□□□ 1.24
TNRC18-203ENST00000399537 NISCHQ9Y2I1 1504 aa22.82■■□□□ 1.24
TNRC18-203ENST00000399537 SHROOM4Q9ULL8 1493 aa22.77■■□□□ 1.24
TNRC18-203ENST00000399537 APLP2Q06481 763 aa22.52■■□□□ 1.19
TNRC18-203ENST00000399537 ERICH6Q7L0X2 663 aa22.33■■□□□ 1.17
TNRC18-203ENST00000399537 MYT1Q01538 1121 aa22.3■■□□□ 1.16
TNRC18-203ENST00000399537 TTBK1Q5TCY1 1321 aaPredicted RBP22.16■■□□□ 1.14
TNRC18-203ENST00000399537 FAM9AQ8IZU1 332 aaPredicted RBP22.16■■□□□ 1.14
TNRC18-203ENST00000399537 CCER1Q8TC90 406 aaPredicted RBP22.15■■□□□ 1.14
TNRC18-203ENST00000399537 PCGF6Q9BYE7 350 aa22.14■■□□□ 1.13
TNRC18-203ENST00000399537 CENPBP07199 599 aaPredicted RBP22.01■■□□□ 1.11
TNRC18-203ENST00000399537 ZEB1P37275 1124 aaPredicted RBP21.79■■□□□ 1.08
TNRC18-203ENST00000399537 RANGAP1P46060 587 aaPredicted RBP21.77■■□□□ 1.08
TNRC18-203ENST00000399537 NEFLP07196 543 aa21.74■■□□□ 1.07
TNRC18-203ENST00000399537 ATP1B4Q9UN42 357 aaPredicted RBP21.63■■□□□ 1.05
TNRC18-203ENST00000399537 YTHDC1Q96MU7 727 aaKnown RBP21.56■■□□□ 1.04
TNRC18-203ENST00000399537 TRIM41Q8WV44 630 aa21.36■■□□□ 1.01
TNRC18-203ENST00000399537 DAXXQ9UER7 740 aaPredicted RBP21.35■■□□□ 1.01
TNRC18-203ENST00000399537 UBTFP17480 764 aaKnown RBP21.34■■□□□ 1.01
TNRC18-203ENST00000399537 PPARGC1BQ86YN6 1023 aaKnown RBP21.05■□□□□ 0.96
TNRC18-203ENST00000399537 POLR3GLQ9BT43 218 aa21.03■□□□□ 0.96
TNRC18-203ENST00000399537 HRCP23327 699 aa21.02■□□□□ 0.96
TNRC18-203ENST00000399537 TRIM26Q12899 539 aaPredicted RBP20.99■□□□□ 0.95
TNRC18-203ENST00000399537 MYT1LQ9UL68 1186 aa20.93■□□□□ 0.94
TNRC18-203ENST00000399537 ZNF316A6NFI3 1004 aaPredicted RBP20.85■□□□□ 0.93
TNRC18-203ENST00000399537 ITGAEP38570 1179 aa20.8■□□□□ 0.92
TNRC18-203ENST00000399537 CNGB1Q14028 1251 aaPredicted RBP20.76■□□□□ 0.91
TNRC18-203ENST00000399537 RTL5Q5HYW3 569 aaPredicted RBP20.76■□□□□ 0.91
TNRC18-203ENST00000399537 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.76■□□□□ 0.91
TNRC18-203ENST00000399537 HNRNPUL2Q1KMD3 747 aaKnown RBP20.76■□□□□ 0.91
TNRC18-203ENST00000399537 SLC4A1APQ9BWU0 796 aaKnown RBP20.73■□□□□ 0.91
TNRC18-203ENST00000399537 CHIC1Q5VXU3 224 aa20.71■□□□□ 0.91
TNRC18-203ENST00000399537 CLSPNQ9HAW4 1339 aa20.69■□□□□ 0.9
TNRC18-203ENST00000399537 LOC105371045A0A1W2PR82 267 aa20.52■□□□□ 0.87
TNRC18-203ENST00000399537 DIEXFQ68CQ4 756 aaKnown RBP20.49■□□□□ 0.87
TNRC18-203ENST00000399537 ZBTB47Q9UFB7 747 aaPredicted RBP20.28■□□□□ 0.84
TNRC18-203ENST00000399537 BCANQ96GW7 911 aa20.28■□□□□ 0.84
TNRC18-203ENST00000399537 GTF3C3Q9Y5Q9 886 aa20.25■□□□□ 0.83
TNRC18-203ENST00000399537 FAM50AQ14320 339 aaKnown RBP20.23■□□□□ 0.83
TNRC18-203ENST00000399537 TRIM52Q96A61 297 aa20.15■□□□□ 0.82
TNRC18-203ENST00000399537 CANXP27824 592 aaKnown RBP20.15■□□□□ 0.82
TNRC18-203ENST00000399537 BCL11AQ9H165 835 aa20.13■□□□□ 0.81
TNRC18-203ENST00000399537 CDK11AQ9UQ88 783 aaPredicted RBP20.11■□□□□ 0.81
TNRC18-203ENST00000399537 NEUROD1Q13562 356 aa20.1■□□□□ 0.81
TNRC18-203ENST00000399537 ZNF326Q5BKZ1 582 aaKnown RBP20.1■□□□□ 0.81
TNRC18-203ENST00000399537 SLC24A1O60721 1099 aa20.09■□□□□ 0.81
TNRC18-203ENST00000399537 ANP32CO43423 234 aa20.05■□□□□ 0.8
TNRC18-203ENST00000399537 ANP32AP39687 249 aaKnown RBP19.92■□□□□ 0.78
TNRC18-203ENST00000399537 ACIN1Q9UKV3 1341 aaKnown RBP19.91■□□□□ 0.78
TNRC18-203ENST00000399537 NEFMP07197 916 aa19.9■□□□□ 0.78
TNRC18-203ENST00000399537 ANP32BQ92688 251 aaKnown RBP19.82■□□□□ 0.76
TNRC18-203ENST00000399537 NPM2Q86SE8 214 aaKnown RBP19.81■□□□□ 0.76
TNRC18-203ENST00000399537 HSP90AA1P07900 732 aaKnown RBP19.75■□□□□ 0.75
TNRC18-203ENST00000399537 EIF5BO60841 1220 aaKnown RBP19.71■□□□□ 0.75
TNRC18-203ENST00000399537 FBLN2P98095 1184 aa19.64■□□□□ 0.73
TNRC18-203ENST00000399537 UPF2Q9HAU5 1272 aaKnown RBP19.59■□□□□ 0.73
TNRC18-203ENST00000399537 GLIPR1L2Q4G1C9 344 aa19.57■□□□□ 0.72
TNRC18-203ENST00000399537 DCAF1Q9Y4B6 1507 aa19.55■□□□□ 0.72
TNRC18-203ENST00000399537 ARID3CA6NKF2 412 aa19.54■□□□□ 0.72
TNRC18-203ENST00000399537 FKBP8Q14318 412 aa19.52■□□□□ 0.72
TNRC18-203ENST00000399537 PABPN1Q86U42 306 aaKnown RBP eCLIP19.46■□□□□ 0.71
TNRC18-203ENST00000399537 ZNF777Q9ULD5 760 aaPredicted RBP19.45■□□□□ 0.7
TNRC18-203ENST00000399537 ESF1Q9H501 851 aaKnown RBP19.44■□□□□ 0.7
TNRC18-203ENST00000399537 NBR1Q14596 966 aa19.44■□□□□ 0.7
TNRC18-203ENST00000399537 ARXQ96QS3 562 aa19.43■□□□□ 0.7
TNRC18-203ENST00000399537 ABCC9O60706 1549 aa19.42■□□□□ 0.7
TNRC18-203ENST00000399537 SCRIBQ14160 1630 aa19.4■□□□□ 0.7
TNRC18-203ENST00000399537 P3H3Q8IVL6 736 aa19.4■□□□□ 0.7
TNRC18-203ENST00000399537 TONSLQ96HA7 1378 aa19.39■□□□□ 0.69
TNRC18-203ENST00000399537 STAG3Q9UJ98 1225 aa19.38■□□□□ 0.69
TNRC18-203ENST00000399537 HNRNPUQ00839 825 aaKnown RBP eCLIP19.36■□□□□ 0.692e-8■□□□□ 8.8
TNRC18-203ENST00000399537 SCAF1Q9H7N4 1312 aaKnown RBP19.35■□□□□ 0.69
TNRC18-203ENST00000399537 CDK11BP21127 795 aaKnown RBP19.34■□□□□ 0.69
TNRC18-203ENST00000399537 CCDC180Q9P1Z9 1646 aa19.34■□□□□ 0.69
TNRC18-203ENST00000399537 PLPPR3Q6T4P5 718 aa19.33■□□□□ 0.68
TNRC18-203ENST00000399537 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.32■□□□□ 0.68
TNRC18-203ENST00000399537 CHGAP10645 457 aaKnown RBP19.3■□□□□ 0.68
TNRC18-203ENST00000399537 FAM9BQ8IZU0 186 aa19.29■□□□□ 0.68
TNRC18-203ENST00000399537 CCDC136Q96JN2 1154 aa19.27■□□□□ 0.68
TNRC18-203ENST00000399537 MYH16Q9H6N6 1097 aa19.25■□□□□ 0.67
TNRC18-203ENST00000399537 DDX10Q13206 875 aaKnown RBP19.24■□□□□ 0.67
TNRC18-203ENST00000399537 SALL2Q9Y467 1007 aaPredicted RBP19.24■□□□□ 0.67
TNRC18-203ENST00000399537 CSRNP3Q8WYN3 585 aa19.2■□□□□ 0.66
TNRC18-203ENST00000399537 WDR43Q15061 677 aaKnown RBP eCLIP19.19■□□□□ 0.66
TNRC18-203ENST00000399537 TMC1Q8TDI8 760 aa19.15■□□□□ 0.66
TNRC18-203ENST00000399537 A0A0G2JS52 829 aa19.15■□□□□ 0.66
TNRC18-203ENST00000399537 IRX6P78412 446 aaPredicted RBP19.14■□□□□ 0.65
TNRC18-203ENST00000399537 MIER1Q8N108 512 aa19.09■□□□□ 0.65
TNRC18-203ENST00000399537 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.09■□□□□ 0.659e-7■■□□□ 13.3
TNRC18-203ENST00000399537 MRS2Q9HD23 443 aa19.08■□□□□ 0.64
TNRC18-203ENST00000399537 BECN1Q14457 450 aa19.08■□□□□ 0.64
TNRC18-203ENST00000399537 NCLP19338 710 aaKnown RBP19.08■□□□□ 0.64
TNRC18-203ENST00000399537 DDRGK1Q96HY6 314 aa19.03■□□□□ 0.64
TNRC18-203ENST00000399537 TRIM44Q96DX7 344 aaPredicted RBP19.03■□□□□ 0.64
TNRC18-203ENST00000399537 TNNT2P45379 298 aaPredicted RBP19■□□□□ 0.63
TNRC18-203ENST00000399537 MYO15BQ96JP2 1530 aa19■□□□□ 0.63
TNRC18-203ENST00000399537 GOLGA6L22H0YM25 854 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms