RNA–Protein interactions for RNA: ENST00000532317.5

PICALM-219, Transcript of phosphatidylinositol binding clathrin assembly protein, humanhuman

TSL 1 (best) BASIC

Gene PICALM, Length 3,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PICALM-219ENST00000532317 NISCHQ9Y2I1 1504 aa34.28■■■■□ 3.08
PICALM-219ENST00000532317 SHROOM4Q9ULL8 1493 aa30.51■■■□□ 2.47
PICALM-219ENST00000532317 DCAF8L2P0C7V8 631 aa30.37■■■□□ 2.45
PICALM-219ENST00000532317 SUPT5HO00267 1087 aaKnown RBP29.9■■■□□ 2.38
PICALM-219ENST00000532317 ZCCHC6Q5VYS8 1495 aaKnown RBP28.79■■■□□ 2.2
PICALM-219ENST00000532317 CCDC180Q9P1Z9 1646 aa28.63■■■□□ 2.17
PICALM-219ENST00000532317 CHIC1Q5VXU3 224 aa28.27■■■□□ 2.12
PICALM-219ENST00000532317 EHMT2Q96KQ7 1210 aa28.17■■■□□ 2.1
PICALM-219ENST00000532317 ABCC9O60706 1549 aa28.1■■■□□ 2.09
PICALM-219ENST00000532317 LOC105371045A0A1W2PR82 267 aa27.96■■■□□ 2.07
PICALM-219ENST00000532317 MYO15BQ96JP2 1530 aa27.92■■■□□ 2.06
PICALM-219ENST00000532317 FAM9AQ8IZU1 332 aaPredicted RBP27.88■■■□□ 2.05
PICALM-219ENST00000532317 SCRIBQ14160 1630 aa27.81■■■□□ 2.04
PICALM-219ENST00000532317 PCGF6Q9BYE7 350 aa27.75■■■□□ 2.03
PICALM-219ENST00000532317 TRIM41Q8WV44 630 aa27.5■■□□□ 1.99
PICALM-219ENST00000532317 DCAF1Q9Y4B6 1507 aa27.49■■□□□ 1.99
PICALM-219ENST00000532317 RSF1Q96T23 1441 aaPredicted RBP27.3■■□□□ 1.96
PICALM-219ENST00000532317 PABPN1Q86U42 306 aaKnown RBP eCLIP27.28■■□□□ 1.963e-11■■□□□ 11.9
PICALM-219ENST00000532317 PPARGC1BQ86YN6 1023 aaKnown RBP27.22■■□□□ 1.95
PICALM-219ENST00000532317 CECR2Q9BXF3 1484 aa27.22■■□□□ 1.95
PICALM-219ENST00000532317 TTBK1Q5TCY1 1321 aaPredicted RBP27.08■■□□□ 1.93
PICALM-219ENST00000532317 RB1CC1Q8TDY2 1594 aa27■■□□□ 1.91
PICALM-219ENST00000532317 HRCP23327 699 aa26.99■■□□□ 1.91
PICALM-219ENST00000532317 MROH2BQ7Z745 1585 aa26.9■■□□□ 1.9
PICALM-219ENST00000532317 NACADO15069 1562 aa26.85■■□□□ 1.89
PICALM-219ENST00000532317 WIZO95785 1651 aa26.73■■□□□ 1.87
PICALM-219ENST00000532317 TRIM26Q12899 539 aaPredicted RBP26.7■■□□□ 1.86
PICALM-219ENST00000532317 RANGAP1P46060 587 aaPredicted RBP26.67■■□□□ 1.86
PICALM-219ENST00000532317 UBTFP17480 764 aaKnown RBP26.47■■□□□ 1.83
PICALM-219ENST00000532317 ABCC8Q09428 1581 aa26.34■■□□□ 1.81
PICALM-219ENST00000532317 BAZ1AQ9NRL2 1556 aaPredicted RBP26.3■■□□□ 1.8
PICALM-219ENST00000532317 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.24■■□□□ 1.79
PICALM-219ENST00000532317 CCDC88BA6NC98 1476 aa26.24■■□□□ 1.79
PICALM-219ENST00000532317 SOGA1O94964 1423 aa26.12■■□□□ 1.77
PICALM-219ENST00000532317 CCER1Q8TC90 406 aaPredicted RBP26.09■■□□□ 1.77
PICALM-219ENST00000532317 SMARCA4P51532 1647 aa26.09■■□□□ 1.77
PICALM-219ENST00000532317 UNC13AQ9UPW8 1703 aa26.05■■□□□ 1.76
PICALM-219ENST00000532317 CSRNP3Q8WYN3 585 aa26.04■■□□□ 1.76
PICALM-219ENST00000532317 RUSC2Q8N2Y8 1516 aa26.02■■□□□ 1.76
PICALM-219ENST00000532317 TOP2AP11388 1531 aaKnown RBP25.97■■□□□ 1.75
PICALM-219ENST00000532317 SMARCA2P51531 1590 aa25.92■■□□□ 1.74
PICALM-219ENST00000532317 HNRNPUL2Q1KMD3 747 aaKnown RBP25.87■■□□□ 1.73
PICALM-219ENST00000532317 BICRAQ9NZM4 1560 aa25.86■■□□□ 1.73
PICALM-219ENST00000532317 ZEB1P37275 1124 aaPredicted RBP25.79■■□□□ 1.72
PICALM-219ENST00000532317 WRNQ14191 1432 aaPredicted RBP eCLIP25.78■■□□□ 1.729e-8■□□□□ 8.4
PICALM-219ENST00000532317 CEP162Q5TB80 1403 aa25.77■■□□□ 1.72
PICALM-219ENST00000532317 BAZ1BQ9UIG0 1483 aaKnown RBP25.77■■□□□ 1.72
PICALM-219ENST00000532317 APLP2Q06481 763 aa25.76■■□□□ 1.71
PICALM-219ENST00000532317 ATAD2BQ9ULI0 1458 aa25.68■■□□□ 1.7
PICALM-219ENST00000532317 EIF4G1Q04637 1599 aaKnown RBP25.58■■□□□ 1.69
PICALM-219ENST00000532317 ATP1B4Q9UN42 357 aaPredicted RBP25.56■■□□□ 1.68
PICALM-219ENST00000532317 ITGAEP38570 1179 aa25.54■■□□□ 1.68
PICALM-219ENST00000532317 TNIKQ9UKE5 1360 aa25.51■■□□□ 1.67
PICALM-219ENST00000532317 SYNJ1O43426 1573 aa25.45■■□□□ 1.66
PICALM-219ENST00000532317 GOLGA3Q08378 1498 aa25.44■■□□□ 1.66
PICALM-219ENST00000532317 CLIP1P30622 1438 aa25.41■■□□□ 1.66
PICALM-219ENST00000532317 P3H3Q8IVL6 736 aa25.4■■□□□ 1.66
PICALM-219ENST00000532317 RAPGEF2Q9Y4G8 1499 aa25.37■■□□□ 1.65
PICALM-219ENST00000532317 EEA1Q15075 1411 aa25.3■■□□□ 1.64
PICALM-219ENST00000532317 YTHDC1Q96MU7 727 aaKnown RBP25.28■■□□□ 1.64
PICALM-219ENST00000532317 CEP164Q9UPV0 1460 aa25.26■■□□□ 1.63
PICALM-219ENST00000532317 DIEXFQ68CQ4 756 aaKnown RBP25.24■■□□□ 1.63
PICALM-219ENST00000532317 KANK4Q5T7N3 995 aaPredicted RBP25.18■■□□□ 1.62
PICALM-219ENST00000532317 PEG3Q9GZU2 1588 aa25.13■■□□□ 1.61
PICALM-219ENST00000532317 DNAJC5BQ9UF47 199 aa25.09■■□□□ 1.61
PICALM-219ENST00000532317 NCAPD3P42695 1498 aa25.01■■□□□ 1.59
PICALM-219ENST00000532317 VPS8Q8N3P4 1428 aa25.01■■□□□ 1.59
PICALM-219ENST00000532317 KIF27Q86VH2 1401 aa24.99■■□□□ 1.59
PICALM-219ENST00000532317 CUX2O14529 1486 aa24.98■■□□□ 1.59
PICALM-219ENST00000532317 FAM50AQ14320 339 aaKnown RBP24.97■■□□□ 1.59
PICALM-219ENST00000532317 CUX1P39880 1505 aa24.97■■□□□ 1.59
PICALM-219ENST00000532317 ARID3CA6NKF2 412 aa24.96■■□□□ 1.59
PICALM-219ENST00000532317 SCAF1Q9H7N4 1312 aaKnown RBP24.94■■□□□ 1.58
PICALM-219ENST00000532317 ZNF316A6NFI3 1004 aaPredicted RBP24.92■■□□□ 1.58
PICALM-219ENST00000532317 TOP2BQ02880 1626 aa24.89■■□□□ 1.58
PICALM-219ENST00000532317 NEUROD1Q13562 356 aa24.88■■□□□ 1.57
PICALM-219ENST00000532317 KIF21BO75037 1637 aa24.88■■□□□ 1.57
PICALM-219ENST00000532317 CADPSQ9ULU8 1353 aa24.87■■□□□ 1.57
PICALM-219ENST00000532317 NESP48681 1621 aa24.84■■□□□ 1.57
PICALM-219ENST00000532317 CFTRP13569 1480 aa24.83■■□□□ 1.56
PICALM-219ENST00000532317 ARAP1Q96P48 1450 aa24.79■■□□□ 1.56
PICALM-219ENST00000532317 CARMIL1Q5VZK9 1371 aa24.79■■□□□ 1.56
PICALM-219ENST00000532317 MIER1Q8N108 512 aa24.77■■□□□ 1.56
PICALM-219ENST00000532317 IGF1RP08069 1367 aa24.76■■□□□ 1.55
PICALM-219ENST00000532317 RAD54L2Q9Y4B4 1467 aa24.76■■□□□ 1.55
PICALM-219ENST00000532317 HMGXB3Q12766 1538 aa24.75■■□□□ 1.55
PICALM-219ENST00000532317 CC2D2AQ9P2K1 1620 aa24.74■■□□□ 1.55
PICALM-219ENST00000532317 PRXQ9BXM0 1461 aa24.74■■□□□ 1.55
PICALM-219ENST00000532317 FGD5Q6ZNL6 1462 aa24.72■■□□□ 1.55
PICALM-219ENST00000532317 GTF3C3Q9Y5Q9 886 aa24.71■■□□□ 1.55
PICALM-219ENST00000532317 TDRD9Q8NDG6 1382 aaKnown RBP24.71■■□□□ 1.55
PICALM-219ENST00000532317 CENPBP07199 599 aaPredicted RBP24.69■■□□□ 1.54
PICALM-219ENST00000532317 ACIN1Q9UKV3 1341 aaKnown RBP24.67■■□□□ 1.54
PICALM-219ENST00000532317 FANCD2Q9BXW9 1451 aa24.66■■□□□ 1.54
PICALM-219ENST00000532317 PELP1Q8IZL8 1130 aaKnown RBP24.63■■□□□ 1.53
PICALM-219ENST00000532317 HIRIP3Q9BW71 556 aaPredicted RBP24.63■■□□□ 1.53
PICALM-219ENST00000532317 ARHGAP35Q9NRY4 1499 aa24.6■■□□□ 1.53
PICALM-219ENST00000532317 BIVM-ERCC5R4GMW8 1640 aa24.6■■□□□ 1.53
PICALM-219ENST00000532317 FHOD3Q2V2M9 1422 aa24.57■■□□□ 1.52
PICALM-219ENST00000532317 SIN3AQ96ST3 1273 aa24.56■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms