RNA–Protein interactions for RNA: ENST00000465920.1

PLOD1-205, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 1, humanhuman

TSL 5

Gene PLOD1, Length 871 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD1-205ENST00000465920 NISCHQ9Y2I1 1504 aa29.21■■■□□ 2.27
PLOD1-205ENST00000465920 CCDC180Q9P1Z9 1646 aa26.21■■□□□ 1.79
PLOD1-205ENST00000465920 ABCC9O60706 1549 aa26.01■■□□□ 1.75
PLOD1-205ENST00000465920 CHIC1Q5VXU3 224 aa25.85■■□□□ 1.73
PLOD1-205ENST00000465920 AEBP2Q6ZN18 517 aaPredicted RBP25.7■■□□□ 1.7
PLOD1-205ENST00000465920 RB1CC1Q8TDY2 1594 aa24.83■■□□□ 1.57
PLOD1-205ENST00000465920 NACADO15069 1562 aa24.71■■□□□ 1.55
PLOD1-205ENST00000465920 MYO15BQ96JP2 1530 aa24.45■■□□□ 1.51
PLOD1-205ENST00000465920 DCAF8L2P0C7V8 631 aa24.4■■□□□ 1.5
PLOD1-205ENST00000465920 UNC13AQ9UPW8 1703 aa24.35■■□□□ 1.49
PLOD1-205ENST00000465920 ZCCHC6Q5VYS8 1495 aaKnown RBP24.29■■□□□ 1.48
PLOD1-205ENST00000465920 DNAJC5BQ9UF47 199 aa24.28■■□□□ 1.48
PLOD1-205ENST00000465920 BICRAQ9NZM4 1560 aa24.19■■□□□ 1.46
PLOD1-205ENST00000465920 DCAF1Q9Y4B6 1507 aa24.18■■□□□ 1.46
PLOD1-205ENST00000465920 PABPN1Q86U42 306 aaKnown RBP eCLIP24.16■■□□□ 1.46
PLOD1-205ENST00000465920 SHROOM4Q9ULL8 1493 aa23.86■■□□□ 1.41
PLOD1-205ENST00000465920 SCRIBQ14160 1630 aa23.85■■□□□ 1.41
PLOD1-205ENST00000465920 CC2D2AQ9P2K1 1620 aa23.55■■□□□ 1.36
PLOD1-205ENST00000465920 EIF4G1Q04637 1599 aaKnown RBP23.54■■□□□ 1.36
PLOD1-205ENST00000465920 CECR2Q9BXF3 1484 aa23.43■■□□□ 1.34
PLOD1-205ENST00000465920 NCAPD3P42695 1498 aa22.8■■□□□ 1.24
PLOD1-205ENST00000465920 SMARCA4P51532 1647 aa22.79■■□□□ 1.24
PLOD1-205ENST00000465920 ATAD2BQ9ULI0 1458 aa22.76■■□□□ 1.23
PLOD1-205ENST00000465920 PHF23Q9BUL5 403 aaPredicted RBP22.74■■□□□ 1.23
PLOD1-205ENST00000465920 HMGXB3Q12766 1538 aa22.7■■□□□ 1.22
PLOD1-205ENST00000465920 SMARCA2P51531 1590 aa22.7■■□□□ 1.22
PLOD1-205ENST00000465920 BAZ1AQ9NRL2 1556 aaPredicted RBP22.66■■□□□ 1.22
PLOD1-205ENST00000465920 PEG3Q9GZU2 1588 aa22.6■■□□□ 1.21
PLOD1-205ENST00000465920 MROH2BQ7Z745 1585 aa22.52■■□□□ 1.2
PLOD1-205ENST00000465920 BAZ1BQ9UIG0 1483 aaKnown RBP22.52■■□□□ 1.2
PLOD1-205ENST00000465920 ERCC6Q03468 1493 aa22.41■■□□□ 1.18
PLOD1-205ENST00000465920 NESP48681 1621 aa22.41■■□□□ 1.18
PLOD1-205ENST00000465920 CUX2O14529 1486 aa22.41■■□□□ 1.18
PLOD1-205ENST00000465920 LAMC3Q9Y6N6 1575 aa22.28■■□□□ 1.16
PLOD1-205ENST00000465920 RSF1Q96T23 1441 aaPredicted RBP22.27■■□□□ 1.16
PLOD1-205ENST00000465920 WIZO95785 1651 aa22.25■■□□□ 1.15
PLOD1-205ENST00000465920 THOC2Q8NI27 1593 aaKnown RBP22.24■■□□□ 1.15
PLOD1-205ENST00000465920 DNAJC5Q9H3Z4 198 aa22.16■■□□□ 1.14
PLOD1-205ENST00000465920 KIF21AQ7Z4S6 1674 aa22.16■■□□□ 1.14
PLOD1-205ENST00000465920 SUPT5HO00267 1087 aaKnown RBP22.1■■□□□ 1.13
PLOD1-205ENST00000465920 PDS5BQ9NTI5 1447 aa22.07■■□□□ 1.12
PLOD1-205ENST00000465920 CADPSQ9ULU8 1353 aa22.07■■□□□ 1.12
PLOD1-205ENST00000465920 TOP2AP11388 1531 aaKnown RBP22■■□□□ 1.11
PLOD1-205ENST00000465920 MRC2Q9UBG0 1479 aa21.94■■□□□ 1.1
PLOD1-205ENST00000465920 WDR62O43379 1518 aa21.93■■□□□ 1.1
PLOD1-205ENST00000465920 CFTRP13569 1480 aa21.9■■□□□ 1.1
PLOD1-205ENST00000465920 CEP164Q9UPV0 1460 aa21.86■■□□□ 1.09
PLOD1-205ENST00000465920 FANCD2Q9BXW9 1451 aa21.85■■□□□ 1.09
PLOD1-205ENST00000465920 SENP3Q9H4L4 574 aaPredicted RBP21.81■■□□□ 1.08
PLOD1-205ENST00000465920 PRDM2Q13029 1718 aa21.74■■□□□ 1.07
PLOD1-205ENST00000465920 URB2Q14146 1524 aaKnown RBP21.7■■□□□ 1.07
PLOD1-205ENST00000465920 CCDC88BA6NC98 1476 aa21.7■■□□□ 1.06
PLOD1-205ENST00000465920 TOPBP1Q92547 1522 aa21.47■■□□□ 1.03
PLOD1-205ENST00000465920 DNMBPQ6XZF7 1577 aa21.41■■□□□ 1.02
PLOD1-205ENST00000465920 IFT140Q96RY7 1462 aa21.41■■□□□ 1.02
PLOD1-205ENST00000465920 ZNF608Q9ULD9 1512 aaPredicted RBP21.4■■□□□ 1.02
PLOD1-205ENST00000465920 ABCC8Q09428 1581 aa21.36■■□□□ 1.01
PLOD1-205ENST00000465920 PLPPR3Q6T4P5 718 aa21.34■■□□□ 1.01
PLOD1-205ENST00000465920 EIF4G3O43432 1585 aaKnown RBP21.32■■□□□ 1
PLOD1-205ENST00000465920 TARBP1Q13395 1621 aaKnown RBP21.31■■□□□ 1
PLOD1-205ENST00000465920 POLA1P09884 1462 aaPredicted RBP21.27■■□□□ 1
PLOD1-205ENST00000465920 OSCARQ8IYS5 282 aa21.26■□□□□ 0.99
PLOD1-205ENST00000465920 TRIM41Q8WV44 630 aa21.18■□□□□ 0.98
PLOD1-205ENST00000465920 AQRO60306 1485 aaKnown RBP eCLIP21.17■□□□□ 0.988e-8■■■■■ 29
PLOD1-205ENST00000465920 CUX1P39880 1505 aa21.17■□□□□ 0.98
PLOD1-205ENST00000465920 RAD54L2Q9Y4B4 1467 aa21.15■□□□□ 0.98
PLOD1-205ENST00000465920 FGD5Q6ZNL6 1462 aa21.13■□□□□ 0.97
PLOD1-205ENST00000465920 CHD1O14646 1710 aa21.12■□□□□ 0.97
PLOD1-205ENST00000465920 RIMBP3CA6NJZ7 1639 aa21.12■□□□□ 0.97
PLOD1-205ENST00000465920 RIMBP3BA6NNM3 1639 aa21.12■□□□□ 0.97
PLOD1-205ENST00000465920 RIMBP3Q9UFD9 1639 aa21.12■□□□□ 0.97
PLOD1-205ENST00000465920 WDR97A6NE52 1622 aa21.09■□□□□ 0.97
PLOD1-205ENST00000465920 SOGA1O94964 1423 aa21.08■□□□□ 0.97
PLOD1-205ENST00000465920 ARHGEF11O15085 1522 aa21.07■□□□□ 0.96
PLOD1-205ENST00000465920 TDRD9Q8NDG6 1382 aaKnown RBP21.03■□□□□ 0.96
PLOD1-205ENST00000465920 SNAPC4Q5SXM2 1469 aa21■□□□□ 0.95
PLOD1-205ENST00000465920 WRNQ14191 1432 aaPredicted RBP eCLIP20.98■□□□□ 0.95
PLOD1-205ENST00000465920 MAGI1Q96QZ7 1491 aaPredicted RBP20.95■□□□□ 0.94
PLOD1-205ENST00000465920 GRIN2BQ13224 1484 aa20.94■□□□□ 0.94
PLOD1-205ENST00000465920 ABCA5Q8WWZ7 1642 aa20.93■□□□□ 0.94
PLOD1-205ENST00000465920 CLASP1Q7Z460 1538 aa20.92■□□□□ 0.94
PLOD1-205ENST00000465920 ABCA10Q8WWZ4 1543 aa20.92■□□□□ 0.94
PLOD1-205ENST00000465920 PBRM1Q86U86 1689 aa20.92■□□□□ 0.94
PLOD1-205ENST00000465920 SYNJ1O43426 1573 aa20.9■□□□□ 0.94
PLOD1-205ENST00000465920 ARAP1Q96P48 1450 aa20.88■□□□□ 0.93
PLOD1-205ENST00000465920 FBLN2P98095 1184 aa20.88■□□□□ 0.93
PLOD1-205ENST00000465920 GAPVD1Q14C86 1478 aa20.88■□□□□ 0.93
PLOD1-205ENST00000465920 BIVM-ERCC5R4GMW8 1640 aa20.87■□□□□ 0.93
PLOD1-205ENST00000465920 SYNJ2O15056 1496 aa20.87■□□□□ 0.93
PLOD1-205ENST00000465920 TOP2BQ02880 1626 aa20.85■□□□□ 0.93
PLOD1-205ENST00000465920 CHMP7Q8WUX9 453 aaPredicted RBP20.77■□□□□ 0.92
PLOD1-205ENST00000465920 CYB5RLQ6IPT4 315 aa20.75■□□□□ 0.91
PLOD1-205ENST00000465920 ADAMTS12P58397 1594 aa20.75■□□□□ 0.91
PLOD1-205ENST00000465920 GRIN2AQ12879 1464 aa20.69■□□□□ 0.9
PLOD1-205ENST00000465920 CEP170Q5SW79 1584 aa20.65■□□□□ 0.9
PLOD1-205ENST00000465920 ERICH3Q5RHP9 1530 aa20.65■□□□□ 0.9
PLOD1-205ENST00000465920 NUP160Q12769 1436 aa20.64■□□□□ 0.89
PLOD1-205ENST00000465920 FHAD1B1AJZ9 1412 aa20.61■□□□□ 0.89
PLOD1-205ENST00000465920 ERCC6L2Q5T890 1561 aa20.59■□□□□ 0.89
PLOD1-205ENST00000465920 SHROOM2Q13796 1616 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms