RNA–Protein interactions for RNA: ENST00000356360.9

PICALM-201, Transcript of phosphatidylinositol binding clathrin assembly protein, humanhuman

TSL 5 BASIC

Gene PICALM, Length 1,958 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PICALM-201ENST00000356360 NISCHQ9Y2I1 1504 aa19.09■□□□□ 0.65
PICALM-201ENST00000356360 CCDC180Q9P1Z9 1646 aa17.06■□□□□ 0.32
PICALM-201ENST00000356360 ABCC9O60706 1549 aa16.88■□□□□ 0.29
PICALM-201ENST00000356360 RB1CC1Q8TDY2 1594 aa16.11■□□□□ 0.17
PICALM-201ENST00000356360 DCAF8L2P0C7V8 631 aa16.03■□□□□ 0.16
PICALM-201ENST00000356360 NACADO15069 1562 aa16.03■□□□□ 0.16
PICALM-201ENST00000356360 ZCCHC6Q5VYS8 1495 aaKnown RBP15.9■□□□□ 0.14
PICALM-201ENST00000356360 UNC13AQ9UPW8 1703 aa15.88■□□□□ 0.13
PICALM-201ENST00000356360 MYO15BQ96JP2 1530 aa15.83■□□□□ 0.12
PICALM-201ENST00000356360 DCAF1Q9Y4B6 1507 aa15.78■□□□□ 0.12
PICALM-201ENST00000356360 PABPN1Q86U42 306 aaKnown RBP eCLIP15.71■□□□□ 0.1
PICALM-201ENST00000356360 BICRAQ9NZM4 1560 aa15.68■□□□□ 0.1
PICALM-201ENST00000356360 DNAJC5BQ9UF47 199 aa15.65■□□□□ 0.1
PICALM-201ENST00000356360 SCRIBQ14160 1630 aa15.59■□□□□ 0.09
PICALM-201ENST00000356360 SHROOM4Q9ULL8 1493 aa15.4■□□□□ 0.06
PICALM-201ENST00000356360 CC2D2AQ9P2K1 1620 aa15.27■□□□□ 0.04
PICALM-201ENST00000356360 EIF4G1Q04637 1599 aaKnown RBP15.27■□□□□ 0.03
PICALM-201ENST00000356360 CECR2Q9BXF3 1484 aa15.16■□□□□ 0.02
PICALM-201ENST00000356360 SMARCA4P51532 1647 aa14.86□□□□□ -0.03
PICALM-201ENST00000356360 ATAD2BQ9ULI0 1458 aa14.78□□□□□ -0.04
PICALM-201ENST00000356360 BAZ1AQ9NRL2 1556 aaPredicted RBP14.77□□□□□ -0.04
PICALM-201ENST00000356360 NCAPD3P42695 1498 aa14.77□□□□□ -0.05
PICALM-201ENST00000356360 SMARCA2P51531 1590 aa14.74□□□□□ -0.05
PICALM-201ENST00000356360 MROH2BQ7Z745 1585 aa14.72□□□□□ -0.05
PICALM-201ENST00000356360 HMGXB3Q12766 1538 aa14.72□□□□□ -0.05
PICALM-201ENST00000356360 PEG3Q9GZU2 1588 aa14.67□□□□□ -0.06
PICALM-201ENST00000356360 BAZ1BQ9UIG0 1483 aaKnown RBP14.65□□□□□ -0.06
PICALM-201ENST00000356360 RSF1Q96T23 1441 aaPredicted RBP14.61□□□□□ -0.07
PICALM-201ENST00000356360 WIZO95785 1651 aa14.58□□□□□ -0.08
PICALM-201ENST00000356360 NESP48681 1621 aa14.57□□□□□ -0.08
PICALM-201ENST00000356360 ERCC6Q03468 1493 aa14.53□□□□□ -0.08
PICALM-201ENST00000356360 LAMC3Q9Y6N6 1575 aa14.44□□□□□ -0.1
PICALM-201ENST00000356360 KIF21AQ7Z4S6 1674 aa14.43□□□□□ -0.1
PICALM-201ENST00000356360 CUX2O14529 1486 aa14.43□□□□□ -0.1
PICALM-201ENST00000356360 THOC2Q8NI27 1593 aaKnown RBP14.41□□□□□ -0.1
PICALM-201ENST00000356360 TOP2AP11388 1531 aaKnown RBP14.38□□□□□ -0.11
PICALM-201ENST00000356360 SUPT5HO00267 1087 aaKnown RBP14.34□□□□□ -0.11
PICALM-201ENST00000356360 CADPSQ9ULU8 1353 aa14.33□□□□□ -0.12
PICALM-201ENST00000356360 PDS5BQ9NTI5 1447 aa14.3□□□□□ -0.12
PICALM-201ENST00000356360 CCDC88BA6NC98 1476 aa14.26□□□□□ -0.13
PICALM-201ENST00000356360 MRC2Q9UBG0 1479 aa14.23□□□□□ -0.13
PICALM-201ENST00000356360 CFTRP13569 1480 aa14.22□□□□□ -0.13
PICALM-201ENST00000356360 PRDM2Q13029 1718 aa14.21□□□□□ -0.13
PICALM-201ENST00000356360 WDR62O43379 1518 aa14.21□□□□□ -0.14
PICALM-201ENST00000356360 FANCD2Q9BXW9 1451 aa14.2□□□□□ -0.14
PICALM-201ENST00000356360 CEP164Q9UPV0 1460 aa14.2□□□□□ -0.14
PICALM-201ENST00000356360 DNAJC5Q9H3Z4 198 aa14.17□□□□□ -0.14
PICALM-201ENST00000356360 URB2Q14146 1524 aaKnown RBP14.1□□□□□ -0.15
PICALM-201ENST00000356360 TOPBP1Q92547 1522 aa13.97□□□□□ -0.17
PICALM-201ENST00000356360 AEBP2Q6ZN18 517 aaPredicted RBP13.96□□□□□ -0.18
PICALM-201ENST00000356360 DNMBPQ6XZF7 1577 aa13.94□□□□□ -0.18
PICALM-201ENST00000356360 ZNF608Q9ULD9 1512 aaPredicted RBP13.91□□□□□ -0.18
PICALM-201ENST00000356360 IFT140Q96RY7 1462 aa13.9□□□□□ -0.19
PICALM-201ENST00000356360 ABCC8Q09428 1581 aa13.88□□□□□ -0.19
PICALM-201ENST00000356360 EIF4G3O43432 1585 aaKnown RBP13.87□□□□□ -0.19
PICALM-201ENST00000356360 TARBP1Q13395 1621 aaKnown RBP13.85□□□□□ -0.19
PICALM-201ENST00000356360 CHIC1Q5VXU3 224 aa13.84□□□□□ -0.19
PICALM-201ENST00000356360 POLA1P09884 1462 aaPredicted RBP13.83□□□□□ -0.19
PICALM-201ENST00000356360 CUX1P39880 1505 aa13.81□□□□□ -0.2
PICALM-201ENST00000356360 RAD54L2Q9Y4B4 1467 aa13.79□□□□□ -0.2
PICALM-201ENST00000356360 FGD5Q6ZNL6 1462 aa13.78□□□□□ -0.2
PICALM-201ENST00000356360 AQRO60306 1485 aaKnown RBP eCLIP13.77□□□□□ -0.21e-7■■■■■ 30.3
PICALM-201ENST00000356360 CHD1O14646 1710 aa13.77□□□□□ -0.21
PICALM-201ENST00000356360 WRNQ14191 1432 aaPredicted RBP eCLIP13.76□□□□□ -0.21
PICALM-201ENST00000356360 SOGA1O94964 1423 aa13.75□□□□□ -0.21
PICALM-201ENST00000356360 WDR97A6NE52 1622 aa13.74□□□□□ -0.21
PICALM-201ENST00000356360 OSCARQ8IYS5 282 aa13.74□□□□□ -0.21
PICALM-201ENST00000356360 TDRD9Q8NDG6 1382 aaKnown RBP13.7□□□□□ -0.22
PICALM-201ENST00000356360 TRIM41Q8WV44 630 aa13.68□□□□□ -0.22
PICALM-201ENST00000356360 RIMBP3CA6NJZ7 1639 aa13.68□□□□□ -0.22
PICALM-201ENST00000356360 RIMBP3BA6NNM3 1639 aa13.68□□□□□ -0.22
PICALM-201ENST00000356360 RIMBP3Q9UFD9 1639 aa13.68□□□□□ -0.22
PICALM-201ENST00000356360 PBRM1Q86U86 1689 aa13.68□□□□□ -0.22
PICALM-201ENST00000356360 SYNJ1O43426 1573 aa13.67□□□□□ -0.22
PICALM-201ENST00000356360 SNAPC4Q5SXM2 1469 aa13.67□□□□□ -0.22
PICALM-201ENST00000356360 TOP2BQ02880 1626 aa13.67□□□□□ -0.22
PICALM-201ENST00000356360 BIVM-ERCC5R4GMW8 1640 aa13.66□□□□□ -0.22
PICALM-201ENST00000356360 ABCA5Q8WWZ7 1642 aa13.64□□□□□ -0.23
PICALM-201ENST00000356360 ABCA10Q8WWZ4 1543 aa13.62□□□□□ -0.23
PICALM-201ENST00000356360 FBLN2P98095 1184 aa13.61□□□□□ -0.23
PICALM-201ENST00000356360 ARHGEF11O15085 1522 aa13.61□□□□□ -0.23
PICALM-201ENST00000356360 GRIN2BQ13224 1484 aa13.6□□□□□ -0.23
PICALM-201ENST00000356360 MAGI1Q96QZ7 1491 aaPredicted RBP13.59□□□□□ -0.23
PICALM-201ENST00000356360 GAPVD1Q14C86 1478 aa13.59□□□□□ -0.23
PICALM-201ENST00000356360 CLASP1Q7Z460 1538 aa13.55□□□□□ -0.24
PICALM-201ENST00000356360 SYNJ2O15056 1496 aa13.55□□□□□ -0.24
PICALM-201ENST00000356360 ADAMTS12P58397 1594 aa13.52□□□□□ -0.25
PICALM-201ENST00000356360 CHMP7Q8WUX9 453 aaPredicted RBP13.51□□□□□ -0.25
PICALM-201ENST00000356360 ARAP1Q96P48 1450 aa13.5□□□□□ -0.25
PICALM-201ENST00000356360 KIF27Q86VH2 1401 aa13.48□□□□□ -0.25
PICALM-201ENST00000356360 IGF1RP08069 1367 aa13.45□□□□□ -0.26
PICALM-201ENST00000356360 GRIN2AQ12879 1464 aa13.45□□□□□ -0.26
PICALM-201ENST00000356360 CEP170Q5SW79 1584 aa13.45□□□□□ -0.26
PICALM-201ENST00000356360 ERICH3Q5RHP9 1530 aa13.44□□□□□ -0.26
PICALM-201ENST00000356360 CYB5RLQ6IPT4 315 aa13.43□□□□□ -0.26
PICALM-201ENST00000356360 FHAD1B1AJZ9 1412 aa13.42□□□□□ -0.26
PICALM-201ENST00000356360 ERCC6L2Q5T890 1561 aa13.39□□□□□ -0.27
PICALM-201ENST00000356360 NUP160Q12769 1436 aa13.39□□□□□ -0.27
PICALM-201ENST00000356360 RUSC2Q8N2Y8 1516 aa13.37□□□□□ -0.27
PICALM-201ENST00000356360 SHROOM2Q13796 1616 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms