RNA–Protein interactions for RNA: ENST00000527045.1

FDFT1-211, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 1 (best)

Gene FDFT1, Length 642 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-211ENST00000527045 AEBP2Q6ZN18 517 aaPredicted RBP24.39■■□□□ 1.49
FDFT1-211ENST00000527045 CHIC1Q5VXU3 224 aa22.97■■□□□ 1.27
FDFT1-211ENST00000527045 NISCHQ9Y2I1 1504 aa22.57■■□□□ 1.2
FDFT1-211ENST00000527045 ABCC9O60706 1549 aa21.36■■□□□ 1.01
FDFT1-211ENST00000527045 SENP3Q9H4L4 574 aaPredicted RBP20.87■□□□□ 0.93
FDFT1-211ENST00000527045 DNAJC5BQ9UF47 199 aa20.83■□□□□ 0.93
FDFT1-211ENST00000527045 CCDC180Q9P1Z9 1646 aa20.59■□□□□ 0.89
FDFT1-211ENST00000527045 PHF23Q9BUL5 403 aaPredicted RBP20.53■□□□□ 0.88
FDFT1-211ENST00000527045 RB1CC1Q8TDY2 1594 aa19.95■□□□□ 0.78
FDFT1-211ENST00000527045 DNAJC5Q9H3Z4 198 aa19.92■□□□□ 0.78
FDFT1-211ENST00000527045 PABPN1Q86U42 306 aaKnown RBP eCLIP19.78■□□□□ 0.76
FDFT1-211ENST00000527045 NACADO15069 1562 aa19.61■□□□□ 0.73
FDFT1-211ENST00000527045 UNC13AQ9UPW8 1703 aa19.6■□□□□ 0.73
FDFT1-211ENST00000527045 DCAF8L2P0C7V8 631 aa19.45■□□□□ 0.7
FDFT1-211ENST00000527045 FOXD1Q16676 465 aa19.45■□□□□ 0.7
FDFT1-211ENST00000527045 BICRAQ9NZM4 1560 aa19.43■□□□□ 0.7
FDFT1-211ENST00000527045 CECR2Q9BXF3 1484 aa19.29■□□□□ 0.68
FDFT1-211ENST00000527045 CC2D2AQ9P2K1 1620 aa19.25■□□□□ 0.67
FDFT1-211ENST00000527045 MYO15BQ96JP2 1530 aa19.05■□□□□ 0.64
FDFT1-211ENST00000527045 EIF4G1Q04637 1599 aaKnown RBP19■□□□□ 0.63
FDFT1-211ENST00000527045 SHROOM4Q9ULL8 1493 aa18.98■□□□□ 0.63
FDFT1-211ENST00000527045 SCRIBQ14160 1630 aa18.78■□□□□ 0.6
FDFT1-211ENST00000527045 CUX2O14529 1486 aa18.67■□□□□ 0.58
FDFT1-211ENST00000527045 TRIM41Q8WV44 630 aa18.58■□□□□ 0.56
FDFT1-211ENST00000527045 DCAF1Q9Y4B6 1507 aa18.54■□□□□ 0.56
FDFT1-211ENST00000527045 ZCCHC6Q5VYS8 1495 aaKnown RBP18.54■□□□□ 0.56
FDFT1-211ENST00000527045 ERCC6Q03468 1493 aa18.47■□□□□ 0.55
FDFT1-211ENST00000527045 MSH5O43196 834 aa18.32■□□□□ 0.52
FDFT1-211ENST00000527045 PLPPR3Q6T4P5 718 aa18.24■□□□□ 0.51
FDFT1-211ENST00000527045 POTEDQ86YR6 584 aa18.24■□□□□ 0.51
FDFT1-211ENST00000527045 NESP48681 1621 aa18.15■□□□□ 0.5
FDFT1-211ENST00000527045 PIAS4Q8N2W9 510 aaPredicted RBP18.12■□□□□ 0.49
FDFT1-211ENST00000527045 NCAPD3P42695 1498 aa18.11■□□□□ 0.49
FDFT1-211ENST00000527045 THOC2Q8NI27 1593 aaKnown RBP18.09■□□□□ 0.49
FDFT1-211ENST00000527045 PPP6R1Q9UPN7 881 aa18■□□□□ 0.47
FDFT1-211ENST00000527045 ATAD2BQ9ULI0 1458 aa17.97■□□□□ 0.47
FDFT1-211ENST00000527045 SMARCA2P51531 1590 aa17.96■□□□□ 0.47
FDFT1-211ENST00000527045 ADRA2BP18089 450 aa17.92■□□□□ 0.46
FDFT1-211ENST00000527045 HMGXB3Q12766 1538 aa17.92■□□□□ 0.46
FDFT1-211ENST00000527045 KIF21AQ7Z4S6 1674 aa17.91■□□□□ 0.46
FDFT1-211ENST00000527045 LAMC3Q9Y6N6 1575 aa17.83■□□□□ 0.45
FDFT1-211ENST00000527045 SMARCA4P51532 1647 aa17.8■□□□□ 0.44
FDFT1-211ENST00000527045 BAZ1AQ9NRL2 1556 aaPredicted RBP17.78■□□□□ 0.44
FDFT1-211ENST00000527045 BAZ1BQ9UIG0 1483 aaKnown RBP17.77■□□□□ 0.44
FDFT1-211ENST00000527045 PDS5BQ9NTI5 1447 aa17.74■□□□□ 0.43
FDFT1-211ENST00000527045 OSCARQ8IYS5 282 aa17.69■□□□□ 0.42
FDFT1-211ENST00000527045 MRC2Q9UBG0 1479 aa17.66■□□□□ 0.42
FDFT1-211ENST00000527045 WDR62O43379 1518 aa17.64■□□□□ 0.41
FDFT1-211ENST00000527045 RIMBP3CA6NJZ7 1639 aa17.6■□□□□ 0.41
FDFT1-211ENST00000527045 RIMBP3BA6NNM3 1639 aa17.6■□□□□ 0.41
FDFT1-211ENST00000527045 RIMBP3Q9UFD9 1639 aa17.6■□□□□ 0.41
FDFT1-211ENST00000527045 PEG3Q9GZU2 1588 aa17.57■□□□□ 0.4
FDFT1-211ENST00000527045 CADPSQ9ULU8 1353 aa17.53■□□□□ 0.4
FDFT1-211ENST00000527045 TRHP20396 242 aaPredicted RBP17.46■□□□□ 0.39
FDFT1-211ENST00000527045 CEP164Q9UPV0 1460 aa17.44■□□□□ 0.38
FDFT1-211ENST00000527045 ARHGEF11O15085 1522 aa17.43■□□□□ 0.38
FDFT1-211ENST00000527045 MROH2BQ7Z745 1585 aa17.41■□□□□ 0.38
FDFT1-211ENST00000527045 CYB5RLQ6IPT4 315 aa17.37■□□□□ 0.37
FDFT1-211ENST00000527045 FANCD2Q9BXW9 1451 aa17.37■□□□□ 0.37
FDFT1-211ENST00000527045 URB2Q14146 1524 aaKnown RBP17.28■□□□□ 0.36
FDFT1-211ENST00000527045 ILDR1Q86SU0 546 aaPredicted RBP17.22■□□□□ 0.35
FDFT1-211ENST00000527045 WIZO95785 1651 aa17.21■□□□□ 0.35
FDFT1-211ENST00000527045 ARAP1Q96P48 1450 aa17.21■□□□□ 0.35
FDFT1-211ENST00000527045 ZNF608Q9ULD9 1512 aaPredicted RBP17.21■□□□□ 0.34
FDFT1-211ENST00000527045 CFTRP13569 1480 aa17.18■□□□□ 0.34
FDFT1-211ENST00000527045 CHD1O14646 1710 aa17.13■□□□□ 0.33
FDFT1-211ENST00000527045 IFT140Q96RY7 1462 aa17.11■□□□□ 0.33
FDFT1-211ENST00000527045 EIF4G3O43432 1585 aaKnown RBP17.07■□□□□ 0.32
FDFT1-211ENST00000527045 RSF1Q96T23 1441 aaPredicted RBP17.03■□□□□ 0.32
FDFT1-211ENST00000527045 PRDM2Q13029 1718 aa17.02■□□□□ 0.32
FDFT1-211ENST00000527045 FBLN2P98095 1184 aa17.01■□□□□ 0.31
FDFT1-211ENST00000527045 TOPBP1Q92547 1522 aa16.96■□□□□ 0.3
FDFT1-211ENST00000527045 AQRO60306 1485 aaKnown RBP eCLIP16.95■□□□□ 0.31e-13■■■■□ 22.3
FDFT1-211ENST00000527045 TOP2AP11388 1531 aaKnown RBP16.88■□□□□ 0.29
FDFT1-211ENST00000527045 TARBP1Q13395 1621 aaKnown RBP16.87■□□□□ 0.29
FDFT1-211ENST00000527045 CLASP1Q7Z460 1538 aa16.85■□□□□ 0.29
FDFT1-211ENST00000527045 DNMBPQ6XZF7 1577 aa16.82■□□□□ 0.28
FDFT1-211ENST00000527045 ABCC8Q09428 1581 aa16.81■□□□□ 0.28
FDFT1-211ENST00000527045 SYNJ1O43426 1573 aa16.77■□□□□ 0.27
FDFT1-211ENST00000527045 SNAPC4Q5SXM2 1469 aa16.74■□□□□ 0.27
FDFT1-211ENST00000527045 GAPVD1Q14C86 1478 aa16.73■□□□□ 0.27
FDFT1-211ENST00000527045 TDRD9Q8NDG6 1382 aaKnown RBP16.73■□□□□ 0.27
FDFT1-211ENST00000527045 POLA1P09884 1462 aaPredicted RBP16.73■□□□□ 0.27
FDFT1-211ENST00000527045 CHMP7Q8WUX9 453 aaPredicted RBP16.72■□□□□ 0.27
FDFT1-211ENST00000527045 RAD54L2Q9Y4B4 1467 aa16.72■□□□□ 0.27
FDFT1-211ENST00000527045 CCDC88BA6NC98 1476 aa16.71■□□□□ 0.27
FDFT1-211ENST00000527045 SOGA1O94964 1423 aa16.64■□□□□ 0.25
FDFT1-211ENST00000527045 MAGI1Q96QZ7 1491 aaPredicted RBP16.63■□□□□ 0.25
FDFT1-211ENST00000527045 KIF13AQ9H1H9 1805 aa16.63■□□□□ 0.25
FDFT1-211ENST00000527045 KDM4FA0A1W2PPD8 638 aa16.61■□□□□ 0.25
FDFT1-211ENST00000527045 SYNJ2O15056 1496 aa16.61■□□□□ 0.25
FDFT1-211ENST00000527045 ERCC6L2Q5T890 1561 aa16.59■□□□□ 0.25
FDFT1-211ENST00000527045 WDR97A6NE52 1622 aa16.59■□□□□ 0.25
FDFT1-211ENST00000527045 GRIN2BQ13224 1484 aa16.56■□□□□ 0.24
FDFT1-211ENST00000527045 FGD5Q6ZNL6 1462 aa16.54■□□□□ 0.24
FDFT1-211ENST00000527045 PBRM1Q86U86 1689 aa16.53■□□□□ 0.24
FDFT1-211ENST00000527045 MAPK8IP2Q13387 824 aaPredicted RBP16.52■□□□□ 0.24
FDFT1-211ENST00000527045 DMRT2Q9Y5R5 561 aa16.51■□□□□ 0.23
FDFT1-211ENST00000527045 CEP170Q5SW79 1584 aa16.44■□□□□ 0.22
FDFT1-211ENST00000527045 SCAF1Q9H7N4 1312 aaKnown RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms