RNA–Protein interactions for RNA: ENST00000528398.5

PICALM-209, Transcript of phosphatidylinositol binding clathrin assembly protein, humanhuman

TSL 2 BASIC

Gene PICALM, Length 2,049 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PICALM-209ENST00000528398 AEBP2Q6ZN18 517 aaPredicted RBP16.82■□□□□ 0.28
PICALM-209ENST00000528398 CHIC1Q5VXU3 224 aa16.55■□□□□ 0.24
PICALM-209ENST00000528398 PHF23Q9BUL5 403 aaPredicted RBP14.56□□□□□ -0.08
PICALM-209ENST00000528398 SENP3Q9H4L4 574 aaPredicted RBP14.24□□□□□ -0.13
PICALM-209ENST00000528398 PLPPR3Q6T4P5 718 aa13.49□□□□□ -0.25
PICALM-209ENST00000528398 FOXD1Q16676 465 aa13.2□□□□□ -0.3
PICALM-209ENST00000528398 PPP6R1Q9UPN7 881 aa12.79□□□□□ -0.36
PICALM-209ENST00000528398 ADRA2BP18089 450 aa12.79□□□□□ -0.36
PICALM-209ENST00000528398 PIAS4Q8N2W9 510 aaPredicted RBP12.49□□□□□ -0.41
PICALM-209ENST00000528398 MSH5O43196 834 aa12.13□□□□□ -0.47
PICALM-209ENST00000528398 PPP4R3CPQ6ZMV5 832 aa11.89□□□□□ -0.51
PICALM-209ENST00000528398 KCNA4P22459 653 aa11.77□□□□□ -0.52
PICALM-209ENST00000528398 SCAF1Q9H7N4 1312 aaKnown RBP11.69□□□□□ -0.54
PICALM-209ENST00000528398 NCBP3Q53F19 620 aaKnown RBP11.61□□□□□ -0.55
PICALM-209ENST00000528398 MAPK8IP2Q13387 824 aaPredicted RBP11.56□□□□□ -0.56
PICALM-209ENST00000528398 CNKSR2Q8WXI2 1034 aa11.53□□□□□ -0.56
PICALM-209ENST00000528398 NPM3O75607 178 aaKnown RBP11.46□□□□□ -0.57
PICALM-209ENST00000528398 DMRT2Q9Y5R5 561 aa11.39□□□□□ -0.59
PICALM-209ENST00000528398 RNF216Q9NWF9 866 aaPredicted RBP11.28□□□□□ -0.6
PICALM-209ENST00000528398 SLC4A1APQ9BWU0 796 aaKnown RBP11.23□□□□□ -0.61
PICALM-209ENST00000528398 HOXD11P31277 338 aaPredicted RBP11.21□□□□□ -0.62
PICALM-209ENST00000528398 DNAJC5BQ9UF47 199 aa11.11□□□□□ -0.63
PICALM-209ENST00000528398 EHMT2Q96KQ7 1210 aa11.06□□□□□ -0.64
PICALM-209ENST00000528398 DCAF8L1A6NGE4 600 aa10.88□□□□□ -0.67
PICALM-209ENST00000528398 CSRNP3Q8WYN3 585 aa10.87□□□□□ -0.67
PICALM-209ENST00000528398 ZBTB22O15209 634 aa10.85□□□□□ -0.67
PICALM-209ENST00000528398 POTEDQ86YR6 584 aa10.82□□□□□ -0.68
PICALM-209ENST00000528398 FOXD4L1Q9NU39 408 aa10.81□□□□□ -0.68
PICALM-209ENST00000528398 SLC4A2P04920 1241 aa10.79□□□□□ -0.68
PICALM-209ENST00000528398 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.67□□□□□ -0.78e-8■□□□□ 9.9
PICALM-209ENST00000528398 MYCNP04198 464 aaPredicted RBP10.59□□□□□ -0.71
PICALM-209ENST00000528398 U3KPZ7 1027 aaPredicted RBP10.53□□□□□ -0.72
PICALM-209ENST00000528398 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.42□□□□□ -0.74
PICALM-209ENST00000528398 HNRNPUL2Q1KMD3 747 aaKnown RBP10.42□□□□□ -0.74
PICALM-209ENST00000528398 RNF39Q9H2S5 420 aa10.41□□□□□ -0.74
PICALM-209ENST00000528398 SAMD1Q6SPF0 538 aaPredicted RBP10.4□□□□□ -0.74
PICALM-209ENST00000528398 ATXN8OSP0DMR3 200 aa10.4□□□□□ -0.75
PICALM-209ENST00000528398 ATF5Q9Y2D1 282 aaPredicted RBP10.29□□□□□ -0.76
PICALM-209ENST00000528398 APLP2Q06481 763 aa10.28□□□□□ -0.76
PICALM-209ENST00000528398 C1QBPQ07021 282 aaKnown RBP10.28□□□□□ -0.76
PICALM-209ENST00000528398 SPINK5Q9NQ38 1064 aaPredicted RBP10.19□□□□□ -0.78
PICALM-209ENST00000528398 CAPN15O75808 1086 aa10.14□□□□□ -0.79
PICALM-209ENST00000528398 ZNF219Q9P2Y4 722 aaPredicted RBP10.14□□□□□ -0.79
PICALM-209ENST00000528398 TRHP20396 242 aaPredicted RBP10.11□□□□□ -0.79
PICALM-209ENST00000528398 CACNB1Q02641 598 aaPredicted RBP10.03□□□□□ -0.8
PICALM-209ENST00000528398 POLA2Q14181 598 aa9.97□□□□□ -0.81
PICALM-209ENST00000528398 ABCB7O75027 752 aa9.97□□□□□ -0.81
PICALM-209ENST00000528398 DSG3P32926 999 aa9.94□□□□□ -0.82
PICALM-209ENST00000528398 MKRN4PQ13434 485 aaPredicted RBP9.86□□□□□ -0.83
PICALM-209ENST00000528398 FBLN2P98095 1184 aa9.84□□□□□ -0.83
PICALM-209ENST00000528398 ZBTB12Q9Y330 459 aaPredicted RBP9.83□□□□□ -0.84
PICALM-209ENST00000528398 FKBP8Q14318 412 aa9.82□□□□□ -0.84
PICALM-209ENST00000528398 SPDYE4A6NLX3 237 aa9.69□□□□□ -0.86
PICALM-209ENST00000528398 OSCARQ8IYS5 282 aa9.66□□□□□ -0.86
PICALM-209ENST00000528398 SPDYE2BA6NHP3 402 aa9.58□□□□□ -0.88
PICALM-209ENST00000528398 SPDYE6P0CI01 402 aa9.58□□□□□ -0.88
PICALM-209ENST00000528398 SPDYE2Q495Y8 402 aa9.58□□□□□ -0.88
PICALM-209ENST00000528398 PROM2Q8N271 834 aa9.56□□□□□ -0.88
PICALM-209ENST00000528398 ZNF692Q9BU19 519 aaPredicted RBP9.55□□□□□ -0.88
PICALM-209ENST00000528398 SSUH2Q9Y2M2 353 aa9.53□□□□□ -0.88
PICALM-209ENST00000528398 RBM42Q9BTD8 480 aaKnown RBP9.48□□□□□ -0.89
PICALM-209ENST00000528398 PABPN1Q86U42 306 aaKnown RBP eCLIP9.44□□□□□ -0.9
PICALM-209ENST00000528398 FBXO3Q9UK99 471 aa9.43□□□□□ -0.9
PICALM-209ENST00000528398 AKT1S1Q96B36 256 aa9.38□□□□□ -0.91
PICALM-209ENST00000528398 VASPP50552 380 aaPredicted RBP9.32□□□□□ -0.92
PICALM-209ENST00000528398 STAG3Q9UJ98 1225 aa9.29□□□□□ -0.92
PICALM-209ENST00000528398 REM2Q8IYK8 340 aaPredicted RBP9.28□□□□□ -0.92
PICALM-209ENST00000528398 SPDYE1Q8NFV5 336 aaPredicted RBP9.26□□□□□ -0.93
PICALM-209ENST00000528398 CLEC11AQ9Y240 323 aa9.21□□□□□ -0.94
PICALM-209ENST00000528398 PITPNM1O00562 1244 aa9.2□□□□□ -0.94
PICALM-209ENST00000528398 IFNLR1Q8IU57 520 aaPredicted RBP9.18□□□□□ -0.94
PICALM-209ENST00000528398 AMER1Q5JTC6 1135 aaPredicted RBP9.17□□□□□ -0.94
PICALM-209ENST00000528398 PLCD3Q8N3E9 789 aa9.17□□□□□ -0.94
PICALM-209ENST00000528398 RTN4Q9NQC3 1192 aaKnown RBP9.16□□□□□ -0.94
PICALM-209ENST00000528398 MIER1Q8N108 512 aa9.15□□□□□ -0.94
PICALM-209ENST00000528398 PRR29P0C7W0 189 aa9.14□□□□□ -0.95
PICALM-209ENST00000528398 PLEKHG5O94827 1062 aa9.1□□□□□ -0.95
PICALM-209ENST00000528398 KLHL34Q8N239 644 aa9.1□□□□□ -0.95
PICALM-209ENST00000528398 CREBZFQ9NS37 354 aa9.07□□□□□ -0.96
PICALM-209ENST00000528398 ZBTB47Q9UFB7 747 aaPredicted RBP9.06□□□□□ -0.96
PICALM-209ENST00000528398 SPOCK2Q92563 424 aa9.05□□□□□ -0.96
PICALM-209ENST00000528398 CHRDL2Q6WN34 429 aa9.03□□□□□ -0.96
PICALM-209ENST00000528398 MNX1P50219 401 aaPredicted RBP9□□□□□ -0.97
PICALM-209ENST00000528398 CHADLQ6NUI6 762 aa8.98□□□□□ -0.97
PICALM-209ENST00000528398 FXR2P51116 673 aaKnown RBP eCLIP8.98□□□□□ -0.975e-15■■□□□ 11.9
PICALM-209ENST00000528398 PRKAR2AP13861 404 aaKnown RBP8.95□□□□□ -0.98
PICALM-209ENST00000528398 PIP4P2Q8N4L2 257 aa8.94□□□□□ -0.98
PICALM-209ENST00000528398 PKD2Q13563 968 aa8.93□□□□□ -0.98
PICALM-209ENST00000528398 NUBP1P53384 320 aa8.93□□□□□ -0.98
PICALM-209ENST00000528398 FARP1Q9Y4F1 1045 aaPredicted RBP8.91□□□□□ -0.98
PICALM-209ENST00000528398 NPM1P06748 294 aaKnown RBP eCLIP8.9□□□□□ -0.98
PICALM-209ENST00000528398 CIZ1Q9ULV3 898 aaPredicted RBP8.88□□□□□ -0.99
PICALM-209ENST00000528398 RASEFQ8IZ41 740 aa8.87□□□□□ -0.99
PICALM-209ENST00000528398 FAM212AQ96EL1 285 aa8.86□□□□□ -0.99
PICALM-209ENST00000528398 GSE1Q14687 1217 aa8.85□□□□□ -0.99
PICALM-209ENST00000528398 ECM2O94769 699 aaPredicted RBP8.85□□□□□ -0.99
PICALM-209ENST00000528398 DCAF8Q5TAQ9 597 aa8.83□□□□□ -1
PICALM-209ENST00000528398 TRIM41Q8WV44 630 aa8.81□□□□□ -1
PICALM-209ENST00000528398 RGL2O15211 777 aa8.77□□□□□ -1.01
PICALM-209ENST00000528398 TSPYL2Q9H2G4 693 aaPredicted RBP8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms