RNA–Protein interactions for RNA: ENST00000549332.1

TCERG1-216, Transcript of transcription elongation regulator 1, humanhuman

TSL 5

Gene TCERG1, Length 3,518 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCERG1-216ENST00000549332 NISCHQ9Y2I1 1504 aa22.41■■□□□ 1.18
TCERG1-216ENST00000549332 SHROOM4Q9ULL8 1493 aa19.6■□□□□ 0.73
TCERG1-216ENST00000549332 DCAF8L2P0C7V8 631 aa19.35■□□□□ 0.69
TCERG1-216ENST00000549332 SUPT5HO00267 1087 aaKnown RBP19.13■□□□□ 0.65
TCERG1-216ENST00000549332 ZCCHC6Q5VYS8 1495 aaKnown RBP18.88■□□□□ 0.61
TCERG1-216ENST00000549332 CCDC180Q9P1Z9 1646 aa18.87■□□□□ 0.61
TCERG1-216ENST00000549332 CHIC1Q5VXU3 224 aa18.23■□□□□ 0.51
TCERG1-216ENST00000549332 ABCC9O60706 1549 aa18.21■□□□□ 0.51
TCERG1-216ENST00000549332 MYO15BQ96JP2 1530 aa18.14■□□□□ 0.49
TCERG1-216ENST00000549332 SCRIBQ14160 1630 aa18.12■□□□□ 0.49
TCERG1-216ENST00000549332 DCAF1Q9Y4B6 1507 aa18.1■□□□□ 0.49
TCERG1-216ENST00000549332 LOC105371045A0A1W2PR82 267 aa17.92■□□□□ 0.46
TCERG1-216ENST00000549332 EHMT2Q96KQ7 1210 aa17.89■□□□□ 0.45
TCERG1-216ENST00000549332 FAM9AQ8IZU1 332 aaPredicted RBP17.79■□□□□ 0.44
TCERG1-216ENST00000549332 RSF1Q96T23 1441 aaPredicted RBP17.77■□□□□ 0.44
TCERG1-216ENST00000549332 PCGF6Q9BYE7 350 aa17.72■□□□□ 0.43
TCERG1-216ENST00000549332 CECR2Q9BXF3 1484 aa17.71■□□□□ 0.43
TCERG1-216ENST00000549332 TRIM41Q8WV44 630 aa17.64■□□□□ 0.41
TCERG1-216ENST00000549332 RB1CC1Q8TDY2 1594 aa17.62■□□□□ 0.41
TCERG1-216ENST00000549332 NACADO15069 1562 aa17.59■□□□□ 0.41
TCERG1-216ENST00000549332 PABPN1Q86U42 306 aaKnown RBP eCLIP17.55■□□□□ 0.4
TCERG1-216ENST00000549332 MROH2BQ7Z745 1585 aa17.55■□□□□ 0.4
TCERG1-216ENST00000549332 WIZO95785 1651 aa17.44■□□□□ 0.38
TCERG1-216ENST00000549332 PPARGC1BQ86YN6 1023 aaKnown RBP17.37■□□□□ 0.37
TCERG1-216ENST00000549332 HRCP23327 699 aa17.34■□□□□ 0.37
TCERG1-216ENST00000549332 TTBK1Q5TCY1 1321 aaPredicted RBP17.21■□□□□ 0.35
TCERG1-216ENST00000549332 BAZ1AQ9NRL2 1556 aaPredicted RBP17.19■□□□□ 0.34
TCERG1-216ENST00000549332 UNC13AQ9UPW8 1703 aa17.15■□□□□ 0.34
TCERG1-216ENST00000549332 TRIM26Q12899 539 aaPredicted RBP17.15■□□□□ 0.34
TCERG1-216ENST00000549332 ABCC8Q09428 1581 aa17.12■□□□□ 0.33
TCERG1-216ENST00000549332 SMARCA4P51532 1647 aa17.09■□□□□ 0.33
TCERG1-216ENST00000549332 CCDC88BA6NC98 1476 aa17.08■□□□□ 0.32
TCERG1-216ENST00000549332 TOP2AP11388 1531 aaKnown RBP17.01■□□□□ 0.31
TCERG1-216ENST00000549332 BICRAQ9NZM4 1560 aa16.99■□□□□ 0.31
TCERG1-216ENST00000549332 SMARCA2P51531 1590 aa16.96■□□□□ 0.31
TCERG1-216ENST00000549332 RANGAP1P46060 587 aaPredicted RBP16.96■□□□□ 0.31
TCERG1-216ENST00000549332 SOGA1O94964 1423 aa16.93■□□□□ 0.3
TCERG1-216ENST00000549332 UBTFP17480 764 aaKnown RBP16.92■□□□□ 0.3
TCERG1-216ENST00000549332 EIF4G1Q04637 1599 aaKnown RBP16.89■□□□□ 0.29
TCERG1-216ENST00000549332 RUSC2Q8N2Y8 1516 aa16.88■□□□□ 0.29
TCERG1-216ENST00000549332 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.79■□□□□ 0.28
TCERG1-216ENST00000549332 CSRNP3Q8WYN3 585 aa16.78■□□□□ 0.28
TCERG1-216ENST00000549332 BAZ1BQ9UIG0 1483 aaKnown RBP16.76■□□□□ 0.27
TCERG1-216ENST00000549332 ATAD2BQ9ULI0 1458 aa16.76■□□□□ 0.27
TCERG1-216ENST00000549332 WRNQ14191 1432 aaPredicted RBP eCLIP16.74■□□□□ 0.27
TCERG1-216ENST00000549332 CEP162Q5TB80 1403 aa16.7■□□□□ 0.26
TCERG1-216ENST00000549332 CCER1Q8TC90 406 aaPredicted RBP16.66■□□□□ 0.26
TCERG1-216ENST00000549332 SYNJ1O43426 1573 aa16.63■□□□□ 0.25
TCERG1-216ENST00000549332 PEG3Q9GZU2 1588 aa16.56■□□□□ 0.24
TCERG1-216ENST00000549332 TNIKQ9UKE5 1360 aa16.56■□□□□ 0.24
TCERG1-216ENST00000549332 ZEB1P37275 1124 aaPredicted RBP16.55■□□□□ 0.24
TCERG1-216ENST00000549332 HNRNPUL2Q1KMD3 747 aaKnown RBP16.53■□□□□ 0.24
TCERG1-216ENST00000549332 GOLGA3Q08378 1498 aa16.52■□□□□ 0.24
TCERG1-216ENST00000549332 RAPGEF2Q9Y4G8 1499 aa16.47■□□□□ 0.23
TCERG1-216ENST00000549332 EEA1Q15075 1411 aa16.47■□□□□ 0.23
TCERG1-216ENST00000549332 CLIP1P30622 1438 aa16.44■□□□□ 0.22
TCERG1-216ENST00000549332 APLP2Q06481 763 aa16.43■□□□□ 0.22
TCERG1-216ENST00000549332 CEP164Q9UPV0 1460 aa16.42■□□□□ 0.22
TCERG1-216ENST00000549332 NCAPD3P42695 1498 aa16.35■□□□□ 0.21
TCERG1-216ENST00000549332 CUX1P39880 1505 aa16.31■□□□□ 0.2
TCERG1-216ENST00000549332 TOP2BQ02880 1626 aa16.3■□□□□ 0.2
TCERG1-216ENST00000549332 ITGAEP38570 1179 aa16.27■□□□□ 0.2
TCERG1-216ENST00000549332 KIF21BO75037 1637 aa16.26■□□□□ 0.19
TCERG1-216ENST00000549332 HMGXB3Q12766 1538 aa16.26■□□□□ 0.19
TCERG1-216ENST00000549332 P3H3Q8IVL6 736 aa16.25■□□□□ 0.19
TCERG1-216ENST00000549332 ATP1B4Q9UN42 357 aaPredicted RBP16.25■□□□□ 0.19
TCERG1-216ENST00000549332 VPS8Q8N3P4 1428 aa16.24■□□□□ 0.19
TCERG1-216ENST00000549332 KANK4Q5T7N3 995 aaPredicted RBP16.23■□□□□ 0.19
TCERG1-216ENST00000549332 DNAJC5BQ9UF47 199 aa16.23■□□□□ 0.19
TCERG1-216ENST00000549332 CFTRP13569 1480 aa16.22■□□□□ 0.19
TCERG1-216ENST00000549332 KIF27Q86VH2 1401 aa16.2■□□□□ 0.18
TCERG1-216ENST00000549332 CUX2O14529 1486 aa16.2■□□□□ 0.18
TCERG1-216ENST00000549332 CC2D2AQ9P2K1 1620 aa16.17■□□□□ 0.18
TCERG1-216ENST00000549332 CADPSQ9ULU8 1353 aa16.17■□□□□ 0.18
TCERG1-216ENST00000549332 BIVM-ERCC5R4GMW8 1640 aa16.17■□□□□ 0.18
TCERG1-216ENST00000549332 DIEXFQ68CQ4 756 aaKnown RBP16.15■□□□□ 0.18
TCERG1-216ENST00000549332 NESP48681 1621 aa16.15■□□□□ 0.18
TCERG1-216ENST00000549332 PRXQ9BXM0 1461 aa16.14■□□□□ 0.17
TCERG1-216ENST00000549332 ARAP1Q96P48 1450 aa16.12■□□□□ 0.17
TCERG1-216ENST00000549332 FGD5Q6ZNL6 1462 aa16.1■□□□□ 0.17
TCERG1-216ENST00000549332 RAD54L2Q9Y4B4 1467 aa16.07■□□□□ 0.16
TCERG1-216ENST00000549332 IGF1RP08069 1367 aa16.07■□□□□ 0.16
TCERG1-216ENST00000549332 YTHDC1Q96MU7 727 aaKnown RBP16.06■□□□□ 0.16
TCERG1-216ENST00000549332 FANCD2Q9BXW9 1451 aa16.05■□□□□ 0.16
TCERG1-216ENST00000549332 CARMIL1Q5VZK9 1371 aa16.05■□□□□ 0.16
TCERG1-216ENST00000549332 ERICH3Q5RHP9 1530 aa16.02■□□□□ 0.15
TCERG1-216ENST00000549332 ARHGAP35Q9NRY4 1499 aa16.01■□□□□ 0.15
TCERG1-216ENST00000549332 SCAF1Q9H7N4 1312 aaKnown RBP16■□□□□ 0.15
TCERG1-216ENST00000549332 ZNF316A6NFI3 1004 aaPredicted RBP15.99■□□□□ 0.15
TCERG1-216ENST00000549332 FAM50AQ14320 339 aaKnown RBP15.97■□□□□ 0.15
TCERG1-216ENST00000549332 TDRD9Q8NDG6 1382 aaKnown RBP15.95■□□□□ 0.14
TCERG1-216ENST00000549332 NEUROD1Q13562 356 aa15.94■□□□□ 0.14
TCERG1-216ENST00000549332 ARID3CA6NKF2 412 aa15.93■□□□□ 0.14
TCERG1-216ENST00000549332 FHOD3Q2V2M9 1422 aa15.91■□□□□ 0.14
TCERG1-216ENST00000549332 POLA1P09884 1462 aaPredicted RBP15.9■□□□□ 0.14
TCERG1-216ENST00000549332 TOPBP1Q92547 1522 aa15.88■□□□□ 0.13
TCERG1-216ENST00000549332 MIER1Q8N108 512 aa15.87■□□□□ 0.13
TCERG1-216ENST00000549332 CCNB3Q8WWL7 1395 aa15.87■□□□□ 0.13
TCERG1-216ENST00000549332 DHX57Q6P158 1386 aaKnown RBP15.85■□□□□ 0.13
TCERG1-216ENST00000549332 PRDM2Q13029 1718 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms