RNA–Protein interactions for RNA: ENST00000534412.5

PICALM-223, Transcript of phosphatidylinositol binding clathrin assembly protein, humanhuman

TSL 5

Gene PICALM, Length 811 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PICALM-223ENST00000534412 AEBP2Q6ZN18 517 aaPredicted RBP28.44■■■□□ 2.14
PICALM-223ENST00000534412 CHIC1Q5VXU3 224 aa27.45■■□□□ 1.98
PICALM-223ENST00000534412 SENP3Q9H4L4 574 aaPredicted RBP24.34■■□□□ 1.49
PICALM-223ENST00000534412 PHF23Q9BUL5 403 aaPredicted RBP24.04■■□□□ 1.44
PICALM-223ENST00000534412 FOXD1Q16676 465 aa22.56■■□□□ 1.2
PICALM-223ENST00000534412 PLPPR3Q6T4P5 718 aa22.17■■□□□ 1.14
PICALM-223ENST00000534412 ADRA2BP18089 450 aa21.34■■□□□ 1.01
PICALM-223ENST00000534412 PPP6R1Q9UPN7 881 aa21.34■■□□□ 1.01
PICALM-223ENST00000534412 PIAS4Q8N2W9 510 aaPredicted RBP21.25■□□□□ 0.99
PICALM-223ENST00000534412 MSH5O43196 834 aa21.07■□□□□ 0.96
PICALM-223ENST00000534412 POTEDQ86YR6 584 aa19.85■□□□□ 0.77
PICALM-223ENST00000534412 SCAF1Q9H7N4 1312 aaKnown RBP19.67■□□□□ 0.74
PICALM-223ENST00000534412 MAPK8IP2Q13387 824 aaPredicted RBP19.47■□□□□ 0.71
PICALM-223ENST00000534412 PPP4R3CPQ6ZMV5 832 aa19.45■□□□□ 0.7
PICALM-223ENST00000534412 DMRT2Q9Y5R5 561 aa19.32■□□□□ 0.68
PICALM-223ENST00000534412 CNKSR2Q8WXI2 1034 aa19.02■□□□□ 0.64
PICALM-223ENST00000534412 NCBP3Q53F19 620 aaKnown RBP18.9■□□□□ 0.62
PICALM-223ENST00000534412 RNF216Q9NWF9 866 aaPredicted RBP18.74■□□□□ 0.59
PICALM-223ENST00000534412 HOXD11P31277 338 aaPredicted RBP18.73■□□□□ 0.59
PICALM-223ENST00000534412 DCAF8L1A6NGE4 600 aa18.61■□□□□ 0.57
PICALM-223ENST00000534412 NPM3O75607 178 aaKnown RBP18.51■□□□□ 0.55
PICALM-223ENST00000534412 KCNA4P22459 653 aa18.48■□□□□ 0.55
PICALM-223ENST00000534412 DNAJC5BQ9UF47 199 aa18.05■□□□□ 0.48
PICALM-223ENST00000534412 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.95■□□□□ 0.465e-8■□□□□ 8.8
PICALM-223ENST00000534412 RNF39Q9H2S5 420 aa17.94■□□□□ 0.46
PICALM-223ENST00000534412 CACNB1Q02641 598 aaPredicted RBP17.86■□□□□ 0.45
PICALM-223ENST00000534412 C1QBPQ07021 282 aaKnown RBP17.76■□□□□ 0.43
PICALM-223ENST00000534412 SLC4A1APQ9BWU0 796 aaKnown RBP17.59■□□□□ 0.41
PICALM-223ENST00000534412 SLC4A2P04920 1241 aa17.54■□□□□ 0.4
PICALM-223ENST00000534412 U3KPZ7 1027 aaPredicted RBP17.51■□□□□ 0.39
PICALM-223ENST00000534412 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.29■□□□□ 0.36
PICALM-223ENST00000534412 HNRNPUL2Q1KMD3 747 aaKnown RBP17.29■□□□□ 0.36
PICALM-223ENST00000534412 APLP2Q06481 763 aa17.25■□□□□ 0.35
PICALM-223ENST00000534412 CAPN15O75808 1086 aa17.2■□□□□ 0.34
PICALM-223ENST00000534412 SAMD1Q6SPF0 538 aaPredicted RBP17.18■□□□□ 0.34
PICALM-223ENST00000534412 FOXD4L1Q9NU39 408 aa17.18■□□□□ 0.34
PICALM-223ENST00000534412 MYCNP04198 464 aaPredicted RBP17.17■□□□□ 0.34
PICALM-223ENST00000534412 SPINK5Q9NQ38 1064 aaPredicted RBP17.15■□□□□ 0.34
PICALM-223ENST00000534412 TRHP20396 242 aaPredicted RBP17.01■□□□□ 0.31
PICALM-223ENST00000534412 ZNF219Q9P2Y4 722 aaPredicted RBP17■□□□□ 0.31
PICALM-223ENST00000534412 ZBTB22O15209 634 aa16.93■□□□□ 0.3
PICALM-223ENST00000534412 DSG3P32926 999 aa16.93■□□□□ 0.3
PICALM-223ENST00000534412 ABCB7O75027 752 aa16.79■□□□□ 0.28
PICALM-223ENST00000534412 ATF5Q9Y2D1 282 aaPredicted RBP16.64■□□□□ 0.25
PICALM-223ENST00000534412 ATXN8OSP0DMR3 200 aa16.63■□□□□ 0.25
PICALM-223ENST00000534412 POLA2Q14181 598 aa16.61■□□□□ 0.25
PICALM-223ENST00000534412 EHMT2Q96KQ7 1210 aa16.6■□□□□ 0.25
PICALM-223ENST00000534412 CSRNP3Q8WYN3 585 aa16.54■□□□□ 0.24
PICALM-223ENST00000534412 ZBTB12Q9Y330 459 aaPredicted RBP16.37■□□□□ 0.21
PICALM-223ENST00000534412 RBM42Q9BTD8 480 aaKnown RBP16.25■□□□□ 0.19
PICALM-223ENST00000534412 FBLN2P98095 1184 aa16.14■□□□□ 0.17
PICALM-223ENST00000534412 OSCARQ8IYS5 282 aa16.04■□□□□ 0.16
PICALM-223ENST00000534412 AKT1S1Q96B36 256 aa15.91■□□□□ 0.14
PICALM-223ENST00000534412 MKRN4PQ13434 485 aaPredicted RBP15.89■□□□□ 0.13
PICALM-223ENST00000534412 SPDYE2BA6NHP3 402 aa15.85■□□□□ 0.13
PICALM-223ENST00000534412 SPDYE6P0CI01 402 aa15.85■□□□□ 0.13
PICALM-223ENST00000534412 SPDYE2Q495Y8 402 aa15.85■□□□□ 0.13
PICALM-223ENST00000534412 ZNF692Q9BU19 519 aaPredicted RBP15.74■□□□□ 0.11
PICALM-223ENST00000534412 REM2Q8IYK8 340 aaPredicted RBP15.73■□□□□ 0.11
PICALM-223ENST00000534412 CHRDL2Q6WN34 429 aa15.68■□□□□ 0.1
PICALM-223ENST00000534412 POTEHQ6S545 545 aa15.67■□□□□ 0.1
PICALM-223ENST00000534412 SSUH2Q9Y2M2 353 aa15.62■□□□□ 0.09
PICALM-223ENST00000534412 PITPNM1O00562 1244 aa15.54■□□□□ 0.08
PICALM-223ENST00000534412 SPDYE1Q8NFV5 336 aaPredicted RBP15.51■□□□□ 0.07
PICALM-223ENST00000534412 NISCHQ9Y2I1 1504 aa15.5■□□□□ 0.07
PICALM-223ENST00000534412 PABPN1Q86U42 306 aaKnown RBP eCLIP15.49■□□□□ 0.07
PICALM-223ENST00000534412 CLEC11AQ9Y240 323 aa15.47■□□□□ 0.07
PICALM-223ENST00000534412 SPDYE4A6NLX3 237 aa15.44■□□□□ 0.06
PICALM-223ENST00000534412 PIP4P2Q8N4L2 257 aa15.36■□□□□ 0.05
PICALM-223ENST00000534412 FXR2P51116 673 aaKnown RBP eCLIP15.32■□□□□ 0.047e-15■■□□□ 12.9
PICALM-223ENST00000534412 PRR29P0C7W0 189 aa15.28■□□□□ 0.04
PICALM-223ENST00000534412 STAG3Q9UJ98 1225 aa15.21■□□□□ 0.03
PICALM-223ENST00000534412 PRKAR2AP13861 404 aaKnown RBP15.19■□□□□ 0.02
PICALM-223ENST00000534412 HAX1O00165 279 aa15.06■□□□□ 0
PICALM-223ENST00000534412 CHADLQ6NUI6 762 aa15.06■□□□□ 0
PICALM-223ENST00000534412 FKBP8Q14318 412 aa15.05■□□□□ -0
PICALM-223ENST00000534412 PROM2Q8N271 834 aa15.02■□□□□ -0
PICALM-223ENST00000534412 FARP1Q9Y4F1 1045 aaPredicted RBP14.9□□□□□ -0.02
PICALM-223ENST00000534412 CREBZFQ9NS37 354 aa14.88□□□□□ -0.03
PICALM-223ENST00000534412 SP7Q8TDD2 431 aaPredicted RBP14.87□□□□□ -0.03
PICALM-223ENST00000534412 C19orf67A6NJJ6 358 aa14.82□□□□□ -0.04
PICALM-223ENST00000534412 PLEKHG5O94827 1062 aa14.79□□□□□ -0.04
PICALM-223ENST00000534412 EVX2Q03828 476 aa14.76□□□□□ -0.05
PICALM-223ENST00000534412 NPM1P06748 294 aaKnown RBP eCLIP14.75□□□□□ -0.05
PICALM-223ENST00000534412 CD44P16070 742 aaKnown RBP14.73□□□□□ -0.05
PICALM-223ENST00000534412 MIER1Q8N108 512 aa14.73□□□□□ -0.05
PICALM-223ENST00000534412 FBXO3Q9UK99 471 aa14.7□□□□□ -0.06
PICALM-223ENST00000534412 PLCD3Q8N3E9 789 aa14.68□□□□□ -0.06
PICALM-223ENST00000534412 PAK3O75914 559 aaPredicted RBP14.64□□□□□ -0.07
PICALM-223ENST00000534412 MNX1P50219 401 aaPredicted RBP14.63□□□□□ -0.07
PICALM-223ENST00000534412 ZRANB1Q9UGI0 708 aa14.6□□□□□ -0.07
PICALM-223ENST00000534412 ZBTB47Q9UFB7 747 aaPredicted RBP14.57□□□□□ -0.08
PICALM-223ENST00000534412 GABBR2O75899 941 aa14.52□□□□□ -0.09
PICALM-223ENST00000534412 CLCN6P51797 869 aa14.52□□□□□ -0.09
PICALM-223ENST00000534412 ZNF579Q8NAF0 562 aaKnown RBP14.49□□□□□ -0.09
PICALM-223ENST00000534412 TSPYL2Q9H2G4 693 aaPredicted RBP14.44□□□□□ -0.1
PICALM-223ENST00000534412 VASPP50552 380 aaPredicted RBP14.43□□□□□ -0.1
PICALM-223ENST00000534412 KLHL34Q8N239 644 aa14.37□□□□□ -0.11
PICALM-223ENST00000534412 PHF12Q96QT6 1004 aa14.37□□□□□ -0.11
PICALM-223ENST00000534412 RASEFQ8IZ41 740 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms