RNA–Protein interactions for RNA: ENST00000399434.2

TNRC18-202, Transcript of trinucleotide repeat containing 18, humanhuman

TSL 2 BASIC

Gene TNRC18, Length 1,459 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-202ENST00000399434 NISCHQ9Y2I1 1504 aa38.14■■■■□ 3.7
TNRC18-202ENST00000399434 CCDC180Q9P1Z9 1646 aa33.59■■■□□ 2.97
TNRC18-202ENST00000399434 ABCC9O60706 1549 aa32.01■■■□□ 2.71
TNRC18-202ENST00000399434 ZCCHC6Q5VYS8 1495 aaKnown RBP32■■■□□ 2.71
TNRC18-202ENST00000399434 DCAF1Q9Y4B6 1507 aa31.57■■■□□ 2.65
TNRC18-202ENST00000399434 MYO15BQ96JP2 1530 aa31.37■■■□□ 2.61
TNRC18-202ENST00000399434 DCAF8L2P0C7V8 631 aa31.33■■■□□ 2.61
TNRC18-202ENST00000399434 NACADO15069 1562 aa31.29■■■□□ 2.6
TNRC18-202ENST00000399434 RB1CC1Q8TDY2 1594 aa31.13■■■□□ 2.57
TNRC18-202ENST00000399434 SCRIBQ14160 1630 aa30.74■■■□□ 2.51
TNRC18-202ENST00000399434 SHROOM4Q9ULL8 1493 aa30.64■■■□□ 2.5
TNRC18-202ENST00000399434 UNC13AQ9UPW8 1703 aa30.64■■■□□ 2.5
TNRC18-202ENST00000399434 BICRAQ9NZM4 1560 aa30.29■■■□□ 2.44
TNRC18-202ENST00000399434 PABPN1Q86U42 306 aaKnown RBP eCLIP29.99■■■□□ 2.39
TNRC18-202ENST00000399434 CECR2Q9BXF3 1484 aa29.66■■■□□ 2.34
TNRC18-202ENST00000399434 BAZ1AQ9NRL2 1556 aaPredicted RBP29.48■■■□□ 2.31
TNRC18-202ENST00000399434 SMARCA4P51532 1647 aa29.47■■■□□ 2.31
TNRC18-202ENST00000399434 MROH2BQ7Z745 1585 aa29.46■■■□□ 2.31
TNRC18-202ENST00000399434 RSF1Q96T23 1441 aaPredicted RBP29.37■■■□□ 2.29
TNRC18-202ENST00000399434 EIF4G1Q04637 1599 aaKnown RBP29.35■■■□□ 2.29
TNRC18-202ENST00000399434 WIZO95785 1651 aa29.22■■■□□ 2.27
TNRC18-202ENST00000399434 SUPT5HO00267 1087 aaKnown RBP29.16■■■□□ 2.26
TNRC18-202ENST00000399434 PEG3Q9GZU2 1588 aa29.14■■■□□ 2.26
TNRC18-202ENST00000399434 ATAD2BQ9ULI0 1458 aa29.03■■■□□ 2.24
TNRC18-202ENST00000399434 CC2D2AQ9P2K1 1620 aa29.03■■■□□ 2.24
TNRC18-202ENST00000399434 SMARCA2P51531 1590 aa29.01■■■□□ 2.23
TNRC18-202ENST00000399434 TOP2AP11388 1531 aaKnown RBP28.91■■■□□ 2.22
TNRC18-202ENST00000399434 HMGXB3Q12766 1538 aa28.84■■■□□ 2.21
TNRC18-202ENST00000399434 NCAPD3P42695 1498 aa28.84■■■□□ 2.21
TNRC18-202ENST00000399434 BAZ1BQ9UIG0 1483 aaKnown RBP28.81■■■□□ 2.2
TNRC18-202ENST00000399434 DNAJC5BQ9UF47 199 aa28.77■■■□□ 2.2
TNRC18-202ENST00000399434 CCDC88BA6NC98 1476 aa28.53■■■□□ 2.16
TNRC18-202ENST00000399434 PRDM2Q13029 1718 aa28.09■■■□□ 2.09
TNRC18-202ENST00000399434 CFTRP13569 1480 aa28.09■■■□□ 2.09
TNRC18-202ENST00000399434 CADPSQ9ULU8 1353 aa28.01■■■□□ 2.08
TNRC18-202ENST00000399434 NESP48681 1621 aa28■■■□□ 2.07
TNRC18-202ENST00000399434 LAMC3Q9Y6N6 1575 aa27.98■■■□□ 2.07
TNRC18-202ENST00000399434 ABCC8Q09428 1581 aa27.82■■■□□ 2.04
TNRC18-202ENST00000399434 KIF21AQ7Z4S6 1674 aa27.76■■■□□ 2.03
TNRC18-202ENST00000399434 FANCD2Q9BXW9 1451 aa27.75■■■□□ 2.03
TNRC18-202ENST00000399434 CHIC1Q5VXU3 224 aa27.75■■■□□ 2.03
TNRC18-202ENST00000399434 PDS5BQ9NTI5 1447 aa27.66■■■□□ 2.02
TNRC18-202ENST00000399434 SYNJ1O43426 1573 aa27.65■■■□□ 2.02
TNRC18-202ENST00000399434 WRNQ14191 1432 aaPredicted RBP eCLIP27.63■■■□□ 2.011e-6■■■■■ 58.5
TNRC18-202ENST00000399434 CEP164Q9UPV0 1460 aa27.62■■■□□ 2.01
TNRC18-202ENST00000399434 CUX1P39880 1505 aa27.59■■■□□ 2.01
TNRC18-202ENST00000399434 BIVM-ERCC5R4GMW8 1640 aa27.59■■■□□ 2.01
TNRC18-202ENST00000399434 TOP2BQ02880 1626 aa27.56■■■□□ 2
TNRC18-202ENST00000399434 URB2Q14146 1524 aaKnown RBP27.49■■□□□ 1.99
TNRC18-202ENST00000399434 DNMBPQ6XZF7 1577 aa27.49■■□□□ 1.99
TNRC18-202ENST00000399434 TOPBP1Q92547 1522 aa27.44■■□□□ 1.98
TNRC18-202ENST00000399434 THOC2Q8NI27 1593 aaKnown RBP27.44■■□□□ 1.98
TNRC18-202ENST00000399434 TRIM41Q8WV44 630 aa27.44■■□□□ 1.98
TNRC18-202ENST00000399434 ERCC6Q03468 1493 aa27.43■■□□□ 1.98
TNRC18-202ENST00000399434 MRC2Q9UBG0 1479 aa27.42■■□□□ 1.98
TNRC18-202ENST00000399434 WDR62O43379 1518 aa27.36■■□□□ 1.97
TNRC18-202ENST00000399434 FGD5Q6ZNL6 1462 aa27.33■■□□□ 1.96
TNRC18-202ENST00000399434 POLA1P09884 1462 aaPredicted RBP27.27■■□□□ 1.96
TNRC18-202ENST00000399434 WDR97A6NE52 1622 aa27.19■■□□□ 1.94
TNRC18-202ENST00000399434 SOGA1O94964 1423 aa27.15■■□□□ 1.94
TNRC18-202ENST00000399434 CUX2O14529 1486 aa27.14■■□□□ 1.93
TNRC18-202ENST00000399434 RAD54L2Q9Y4B4 1467 aa27.14■■□□□ 1.93
TNRC18-202ENST00000399434 TARBP1Q13395 1621 aaKnown RBP27.14■■□□□ 1.93
TNRC18-202ENST00000399434 RUSC2Q8N2Y8 1516 aa27.1■■□□□ 1.93
TNRC18-202ENST00000399434 ABCA10Q8WWZ4 1543 aa27.07■■□□□ 1.92
TNRC18-202ENST00000399434 IFT140Q96RY7 1462 aa26.99■■□□□ 1.91
TNRC18-202ENST00000399434 ABCA5Q8WWZ7 1642 aa26.99■■□□□ 1.91
TNRC18-202ENST00000399434 EEA1Q15075 1411 aa26.97■■□□□ 1.91
TNRC18-202ENST00000399434 KIF27Q86VH2 1401 aa26.94■■□□□ 1.9
TNRC18-202ENST00000399434 FAM9AQ8IZU1 332 aaPredicted RBP26.93■■□□□ 1.9
TNRC18-202ENST00000399434 ZNF608Q9ULD9 1512 aaPredicted RBP26.89■■□□□ 1.9
TNRC18-202ENST00000399434 EIF4G3O43432 1585 aaKnown RBP26.86■■□□□ 1.89
TNRC18-202ENST00000399434 PBRM1Q86U86 1689 aa26.85■■□□□ 1.89
TNRC18-202ENST00000399434 TDRD9Q8NDG6 1382 aaKnown RBP26.84■■□□□ 1.89
TNRC18-202ENST00000399434 GAPVD1Q14C86 1478 aa26.81■■□□□ 1.88
TNRC18-202ENST00000399434 AQRO60306 1485 aaKnown RBP eCLIP26.79■■□□□ 1.881e-6■■■■■ 38.8
TNRC18-202ENST00000399434 CSRNP3Q8WYN3 585 aa26.77■■□□□ 1.88
TNRC18-202ENST00000399434 KIF21BO75037 1637 aa26.77■■□□□ 1.88
TNRC18-202ENST00000399434 ERICH3Q5RHP9 1530 aa26.75■■□□□ 1.87
TNRC18-202ENST00000399434 IGF1RP08069 1367 aa26.75■■□□□ 1.87
TNRC18-202ENST00000399434 PRXQ9BXM0 1461 aa26.72■■□□□ 1.87
TNRC18-202ENST00000399434 CUL7Q14999 1698 aa26.71■■□□□ 1.87
TNRC18-202ENST00000399434 GRIN2BQ13224 1484 aa26.68■■□□□ 1.86
TNRC18-202ENST00000399434 ADAMTS12P58397 1594 aa26.65■■□□□ 1.86
TNRC18-202ENST00000399434 RAPGEF2Q9Y4G8 1499 aa26.63■■□□□ 1.85
TNRC18-202ENST00000399434 LOC105371045A0A1W2PR82 267 aa26.62■■□□□ 1.85
TNRC18-202ENST00000399434 GOLGA3Q08378 1498 aa26.6■■□□□ 1.85
TNRC18-202ENST00000399434 SNAPC4Q5SXM2 1469 aa26.59■■□□□ 1.85
TNRC18-202ENST00000399434 CARMIL1Q5VZK9 1371 aa26.59■■□□□ 1.85
TNRC18-202ENST00000399434 EHMT2Q96KQ7 1210 aa26.54■■□□□ 1.84
TNRC18-202ENST00000399434 MAGI1Q96QZ7 1491 aaPredicted RBP26.53■■□□□ 1.84
TNRC18-202ENST00000399434 FHAD1B1AJZ9 1412 aa26.51■■□□□ 1.83
TNRC18-202ENST00000399434 SYNJ2O15056 1496 aa26.42■■□□□ 1.82
TNRC18-202ENST00000399434 CTTNBP2Q8WZ74 1663 aa26.4■■□□□ 1.82
TNRC18-202ENST00000399434 CHD1O14646 1710 aa26.39■■□□□ 1.82
TNRC18-202ENST00000399434 TNIKQ9UKE5 1360 aa26.39■■□□□ 1.81
TNRC18-202ENST00000399434 GRIN2AQ12879 1464 aa26.38■■□□□ 1.81
TNRC18-202ENST00000399434 UBTFP17480 764 aaKnown RBP26.32■■□□□ 1.8
TNRC18-202ENST00000399434 CEP170Q5SW79 1584 aa26.29■■□□□ 1.8
TNRC18-202ENST00000399434 CEP162Q5TB80 1403 aa26.25■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms