RNA–Protein interactions for RNA: ENST00000591323.5

PPP6R1-206, Transcript of protein phosphatase 6 regulatory subunit 1, humanhuman

TSL 3

Gene PPP6R1, Length 848 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP6R1-206ENST00000591323 NISCHQ9Y2I1 1504 aa39.29■■■■□ 3.88
PPP6R1-206ENST00000591323 CCDC180Q9P1Z9 1646 aa35.22■■■■□ 3.23
PPP6R1-206ENST00000591323 ABCC9O60706 1549 aa35.11■■■■□ 3.21
PPP6R1-206ENST00000591323 RB1CC1Q8TDY2 1594 aa33.43■■■□□ 2.94
PPP6R1-206ENST00000591323 NACADO15069 1562 aa33.19■■■□□ 2.9
PPP6R1-206ENST00000591323 MYO15BQ96JP2 1530 aa32.96■■■□□ 2.87
PPP6R1-206ENST00000591323 DCAF8L2P0C7V8 631 aa32.91■■■□□ 2.86
PPP6R1-206ENST00000591323 UNC13AQ9UPW8 1703 aa32.88■■■□□ 2.85
PPP6R1-206ENST00000591323 DNAJC5BQ9UF47 199 aa32.86■■■□□ 2.85
PPP6R1-206ENST00000591323 DCAF1Q9Y4B6 1507 aa32.63■■■□□ 2.81
PPP6R1-206ENST00000591323 ZCCHC6Q5VYS8 1495 aaKnown RBP32.6■■■□□ 2.81
PPP6R1-206ENST00000591323 PABPN1Q86U42 306 aaKnown RBP eCLIP32.58■■■□□ 2.81
PPP6R1-206ENST00000591323 BICRAQ9NZM4 1560 aa32.55■■■□□ 2.8
PPP6R1-206ENST00000591323 SCRIBQ14160 1630 aa32.08■■■□□ 2.73
PPP6R1-206ENST00000591323 SHROOM4Q9ULL8 1493 aa32.03■■■□□ 2.72
PPP6R1-206ENST00000591323 CC2D2AQ9P2K1 1620 aa31.77■■■□□ 2.68
PPP6R1-206ENST00000591323 EIF4G1Q04637 1599 aaKnown RBP31.7■■■□□ 2.67
PPP6R1-206ENST00000591323 CECR2Q9BXF3 1484 aa31.6■■■□□ 2.65
PPP6R1-206ENST00000591323 NCAPD3P42695 1498 aa30.62■■■□□ 2.49
PPP6R1-206ENST00000591323 SMARCA4P51532 1647 aa30.59■■■□□ 2.49
PPP6R1-206ENST00000591323 ATAD2BQ9ULI0 1458 aa30.54■■■□□ 2.48
PPP6R1-206ENST00000591323 BAZ1AQ9NRL2 1556 aaPredicted RBP30.48■■■□□ 2.47
PPP6R1-206ENST00000591323 SMARCA2P51531 1590 aa30.46■■■□□ 2.47
PPP6R1-206ENST00000591323 HMGXB3Q12766 1538 aa30.46■■■□□ 2.47
PPP6R1-206ENST00000591323 PEG3Q9GZU2 1588 aa30.31■■■□□ 2.44
PPP6R1-206ENST00000591323 ERCC6Q03468 1493 aa30.25■■■□□ 2.43
PPP6R1-206ENST00000591323 CUX2O14529 1486 aa30.24■■■□□ 2.43
PPP6R1-206ENST00000591323 BAZ1BQ9UIG0 1483 aaKnown RBP30.24■■■□□ 2.43
PPP6R1-206ENST00000591323 NESP48681 1621 aa30.2■■■□□ 2.43
PPP6R1-206ENST00000591323 MROH2BQ7Z745 1585 aa30.19■■■□□ 2.42
PPP6R1-206ENST00000591323 DNAJC5Q9H3Z4 198 aa30.1■■■□□ 2.41
PPP6R1-206ENST00000591323 THOC2Q8NI27 1593 aaKnown RBP29.98■■■□□ 2.39
PPP6R1-206ENST00000591323 LAMC3Q9Y6N6 1575 aa29.98■■■□□ 2.39
PPP6R1-206ENST00000591323 KIF21AQ7Z4S6 1674 aa29.91■■■□□ 2.38
PPP6R1-206ENST00000591323 WIZO95785 1651 aa29.87■■■□□ 2.37
PPP6R1-206ENST00000591323 RSF1Q96T23 1441 aaPredicted RBP29.81■■■□□ 2.36
PPP6R1-206ENST00000591323 PDS5BQ9NTI5 1447 aa29.69■■■□□ 2.34
PPP6R1-206ENST00000591323 CADPSQ9ULU8 1353 aa29.68■■■□□ 2.34
PPP6R1-206ENST00000591323 TOP2AP11388 1531 aaKnown RBP29.52■■■□□ 2.32
PPP6R1-206ENST00000591323 MRC2Q9UBG0 1479 aa29.52■■■□□ 2.32
PPP6R1-206ENST00000591323 WDR62O43379 1518 aa29.5■■■□□ 2.31
PPP6R1-206ENST00000591323 CFTRP13569 1480 aa29.41■■■□□ 2.3
PPP6R1-206ENST00000591323 CEP164Q9UPV0 1460 aa29.4■■■□□ 2.3
PPP6R1-206ENST00000591323 FANCD2Q9BXW9 1451 aa29.36■■■□□ 2.29
PPP6R1-206ENST00000591323 PRDM2Q13029 1718 aa29.27■■■□□ 2.28
PPP6R1-206ENST00000591323 CCDC88BA6NC98 1476 aa29.22■■■□□ 2.27
PPP6R1-206ENST00000591323 URB2Q14146 1524 aaKnown RBP29.18■■■□□ 2.26
PPP6R1-206ENST00000591323 ABCC8Q09428 1581 aa28.91■■■□□ 2.22
PPP6R1-206ENST00000591323 TOPBP1Q92547 1522 aa28.84■■■□□ 2.21
PPP6R1-206ENST00000591323 ZNF608Q9ULD9 1512 aaPredicted RBP28.79■■■□□ 2.2
PPP6R1-206ENST00000591323 TRIM41Q8WV44 630 aa28.79■■■□□ 2.2
PPP6R1-206ENST00000591323 IFT140Q96RY7 1462 aa28.78■■■□□ 2.2
PPP6R1-206ENST00000591323 DNMBPQ6XZF7 1577 aa28.75■■■□□ 2.19
PPP6R1-206ENST00000591323 EIF4G3O43432 1585 aaKnown RBP28.72■■■□□ 2.19
PPP6R1-206ENST00000591323 SUPT5HO00267 1087 aaKnown RBP28.72■■■□□ 2.19
PPP6R1-206ENST00000591323 OSCARQ8IYS5 282 aa28.69■■■□□ 2.18
PPP6R1-206ENST00000591323 TARBP1Q13395 1621 aaKnown RBP28.65■■■□□ 2.18
PPP6R1-206ENST00000591323 RIMBP3CA6NJZ7 1639 aa28.58■■■□□ 2.17
PPP6R1-206ENST00000591323 RIMBP3BA6NNM3 1639 aa28.58■■■□□ 2.17
PPP6R1-206ENST00000591323 RIMBP3Q9UFD9 1639 aa28.58■■■□□ 2.17
PPP6R1-206ENST00000591323 POLA1P09884 1462 aaPredicted RBP28.54■■■□□ 2.16
PPP6R1-206ENST00000591323 CHD1O14646 1710 aa28.54■■■□□ 2.16
PPP6R1-206ENST00000591323 AQRO60306 1485 aaKnown RBP eCLIP28.47■■■□□ 2.156e-8■■■□□ 15.8
PPP6R1-206ENST00000591323 ARHGEF11O15085 1522 aa28.44■■■□□ 2.14
PPP6R1-206ENST00000591323 RAD54L2Q9Y4B4 1467 aa28.41■■■□□ 2.14
PPP6R1-206ENST00000591323 SOGA1O94964 1423 aa28.41■■■□□ 2.14
PPP6R1-206ENST00000591323 CUX1P39880 1505 aa28.38■■■□□ 2.13
PPP6R1-206ENST00000591323 FGD5Q6ZNL6 1462 aa28.36■■■□□ 2.13
PPP6R1-206ENST00000591323 WDR97A6NE52 1622 aa28.32■■■□□ 2.12
PPP6R1-206ENST00000591323 TDRD9Q8NDG6 1382 aaKnown RBP28.27■■■□□ 2.12
PPP6R1-206ENST00000591323 SNAPC4Q5SXM2 1469 aa28.24■■■□□ 2.11
PPP6R1-206ENST00000591323 ARAP1Q96P48 1450 aa28.18■■■□□ 2.1
PPP6R1-206ENST00000591323 PBRM1Q86U86 1689 aa28.18■■■□□ 2.1
PPP6R1-206ENST00000591323 FBLN2P98095 1184 aa28.16■■■□□ 2.1
PPP6R1-206ENST00000591323 CLASP1Q7Z460 1538 aa28.16■■■□□ 2.1
PPP6R1-206ENST00000591323 MAGI1Q96QZ7 1491 aaPredicted RBP28.14■■■□□ 2.09
PPP6R1-206ENST00000591323 WRNQ14191 1432 aaPredicted RBP eCLIP28.12■■■□□ 2.09
PPP6R1-206ENST00000591323 GRIN2BQ13224 1484 aa28.11■■■□□ 2.09
PPP6R1-206ENST00000591323 ABCA10Q8WWZ4 1543 aa28.1■■■□□ 2.09
PPP6R1-206ENST00000591323 ABCA5Q8WWZ7 1642 aa28.09■■■□□ 2.09
PPP6R1-206ENST00000591323 SYNJ1O43426 1573 aa28.07■■■□□ 2.08
PPP6R1-206ENST00000591323 TOP2BQ02880 1626 aa28.05■■■□□ 2.08
PPP6R1-206ENST00000591323 CYB5RLQ6IPT4 315 aa28.05■■■□□ 2.08
PPP6R1-206ENST00000591323 SYNJ2O15056 1496 aa28.03■■■□□ 2.08
PPP6R1-206ENST00000591323 GAPVD1Q14C86 1478 aa28.03■■■□□ 2.08
PPP6R1-206ENST00000591323 CHMP7Q8WUX9 453 aaPredicted RBP28.03■■■□□ 2.08
PPP6R1-206ENST00000591323 BIVM-ERCC5R4GMW8 1640 aa28.01■■■□□ 2.07
PPP6R1-206ENST00000591323 ADAMTS12P58397 1594 aa27.87■■■□□ 2.05
PPP6R1-206ENST00000591323 GRIN2AQ12879 1464 aa27.79■■■□□ 2.04
PPP6R1-206ENST00000591323 ERICH3Q5RHP9 1530 aa27.77■■■□□ 2.04
PPP6R1-206ENST00000591323 CEP170Q5SW79 1584 aa27.77■■■□□ 2.04
PPP6R1-206ENST00000591323 FHAD1B1AJZ9 1412 aa27.75■■■□□ 2.03
PPP6R1-206ENST00000591323 ERCC6L2Q5T890 1561 aa27.73■■■□□ 2.03
PPP6R1-206ENST00000591323 TRHP20396 242 aaPredicted RBP27.71■■■□□ 2.03
PPP6R1-206ENST00000591323 NUP160Q12769 1436 aa27.69■■■□□ 2.02
PPP6R1-206ENST00000591323 SHROOM2Q13796 1616 aa27.67■■■□□ 2.02
PPP6R1-206ENST00000591323 KIF27Q86VH2 1401 aa27.6■■■□□ 2.01
PPP6R1-206ENST00000591323 IGF1RP08069 1367 aa27.57■■■□□ 2
PPP6R1-206ENST00000591323 RUSC2Q8N2Y8 1516 aa27.49■■□□□ 1.99
PPP6R1-206ENST00000591323 JPH4Q96JJ6 628 aa27.45■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms