Protein–RNA interactions for Protein: Q86XP3

DDX42, ATP-dependent RNA helicase DDX42, humanhuman

Known RBP eCLIP

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42Q86XP3 UBE2D3-222ENST00000508238 547 ntTSL 48.42□□□□□ -1.064e-7■■■□□ 18.4
DDX42Q86XP3 UBE2D3-204ENST00000349311 838 ntAPPRIS ALT1 TSL 2 BASIC8.1□□□□□ -1.114e-7■■■□□ 18.4
DDX42Q86XP3 WARS-234ENST00000556695 553 ntTSL 47.75□□□□□ -1.174e-7■■■□□ 18.4
DDX42Q86XP3 WARS-219ENST00000554820 538 ntTSL 47.58□□□□□ -1.24e-7■■■□□ 18.4
DDX42Q86XP3 WARS-237ENST00000557094 582 ntTSL 27.08□□□□□ -1.284e-7■■■□□ 18.4
DDX42Q86XP3 WARS-225ENST00000555813 410 ntTSL 46.8□□□□□ -1.324e-7■■■□□ 18.4
DDX42Q86XP3 WARS-227ENST00000556295 517 ntTSL 36.64□□□□□ -1.354e-7■■■□□ 18.4
DDX42Q86XP3 WARS-221ENST00000555031 658 ntTSL 25.36□□□□□ -1.554e-7■■■□□ 18.4
DDX42Q86XP3 WARS-223ENST00000555410 677 ntTSL 55.24□□□□□ -1.574e-7■■■□□ 18.4
DDX42Q86XP3 WARS-226ENST00000556209 564 ntTSL 44.36□□□□□ -1.714e-7■■■□□ 18.4
DDX42Q86XP3 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.344e-8■■■□□ 18.4
DDX42Q86XP3 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.282e-9■■■□□ 18.3
DDX42Q86XP3 HNRNPF-202ENST00000356053 2670 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.212e-9■■■□□ 18.3
DDX42Q86XP3 HNRNPF-203ENST00000357065 2617 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.482e-9■■■□□ 18.3
DDX42Q86XP3 MVD-203ENST00000562651 908 ntTSL 221.48■■□□□ 1.038e-8■■■□□ 18.2
DDX42Q86XP3 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC22.17■■□□□ 1.144e-7■■■□□ 18.2
DDX42Q86XP3 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19.49■□□□□ 0.714e-7■■■□□ 18.2
DDX42Q86XP3 CIRBP-223ENST00000589266 616 ntTSL 326.01■■□□□ 1.752e-6■■■□□ 17.9
DDX42Q86XP3 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC24.56■■□□□ 1.522e-6■■■□□ 17.9
DDX42Q86XP3 CIRBP-231ENST00000591097 1507 ntTSL 1 (best)24.48■■□□□ 1.512e-6■■■□□ 17.9
DDX42Q86XP3 CIRBP-208ENST00000586548 1734 ntTSL 323.48■■□□□ 1.352e-6■■■□□ 17.9
DDX42Q86XP3 CIRBP-219ENST00000588411 619 ntTSL 523.13■■□□□ 1.292e-6■■■□□ 17.9
DDX42Q86XP3 CIRBP-205ENST00000585913 833 ntTSL 322.92■■□□□ 1.262e-6■■■□□ 17.9
DDX42Q86XP3 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC22.61■■□□□ 1.212e-6■■■□□ 17.9
DDX42Q86XP3 CIRBP-224ENST00000589686 532 ntTSL 222.21■■□□□ 1.152e-6■■■□□ 17.9
DDX42Q86XP3 CIRBP-229ENST00000590704 1456 ntTSL 221.96■■□□□ 1.112e-6■■■□□ 17.9
DDX42Q86XP3 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC21.78■■□□□ 1.082e-6■■■□□ 17.9
DDX42Q86XP3 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC21.75■■□□□ 1.072e-6■■■□□ 17.9
DDX42Q86XP3 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC21.75■■□□□ 1.072e-6■■■□□ 17.9
DDX42Q86XP3 CIRBP-226ENST00000590171 905 ntTSL 321.75■■□□□ 1.072e-6■■■□□ 17.9
DDX42Q86XP3 CIRBP-234ENST00000591659 587 ntTSL 221.75■■□□□ 1.072e-6■■■□□ 17.9
DDX42Q86XP3 MICALL2-204ENST00000467394 2080 ntTSL 221.57■■□□□ 1.042e-6■■■□□ 17.9
DDX42Q86XP3 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC21.4■■□□□ 1.022e-6■■■□□ 17.9
DDX42Q86XP3 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC20.96■□□□□ 0.952e-6■■■□□ 17.9
DDX42Q86XP3 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.77■□□□□ 0.922e-6■■■□□ 17.9
DDX42Q86XP3 MICALL2-209ENST00000479007 1855 ntTSL 220.77■□□□□ 0.922e-6■■■□□ 17.9
DDX42Q86XP3 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC20.22■□□□□ 0.832e-6■■■□□ 17.9
DDX42Q86XP3 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.742e-6■■■□□ 17.9
DDX42Q86XP3 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC19.67■□□□□ 0.742e-6■■■□□ 17.9
DDX42Q86XP3 CIRBP-210ENST00000586636 938 ntTSL 219.48■□□□□ 0.712e-6■■■□□ 17.9
DDX42Q86XP3 CIRBP-237ENST00000592234 571 ntTSL 519.48■□□□□ 0.712e-6■■■□□ 17.9
DDX42Q86XP3 CIRBP-232ENST00000591376 830 ntTSL 319.48■□□□□ 0.712e-6■■■□□ 17.9
DDX42Q86XP3 CIRBP-238ENST00000592412 532 ntTSL 419.43■□□□□ 0.72e-6■■■□□ 17.9
DDX42Q86XP3 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.2■□□□□ 0.662e-6■■■□□ 17.9
DDX42Q86XP3 CIRBP-243ENST00000593128 796 ntTSL 319.02■□□□□ 0.642e-6■■■□□ 17.9
DDX42Q86XP3 MICALL2-215ENST00000496184 2722 ntTSL 219■□□□□ 0.632e-6■■■□□ 17.9
DDX42Q86XP3 MICALL2-208ENST00000472100 5248 ntTSL 218.89■□□□□ 0.612e-6■■■□□ 17.9
DDX42Q86XP3 CIRBP-244ENST00000593283 758 ntTSL 518.73■□□□□ 0.592e-6■■■□□ 17.9
DDX42Q86XP3 MICALL2-205ENST00000467783 639 ntTSL 318.61■□□□□ 0.572e-6■■■□□ 17.9
DDX42Q86XP3 CIRBP-212ENST00000587169 3028 ntTSL 218.55■□□□□ 0.562e-6■■■□□ 17.9
DDX42Q86XP3 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC18.41■□□□□ 0.542e-6■■■□□ 17.9
DDX42Q86XP3 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.52e-6■■■□□ 17.9
DDX42Q86XP3 CCNY-209ENST00000493157 816 ntTSL 518.03■□□□□ 0.482e-6■■■□□ 17.9
DDX42Q86XP3 MICALL2-206ENST00000470807 668 ntTSL 317.92■□□□□ 0.462e-6■■■□□ 17.9
DDX42Q86XP3 CIRBP-206ENST00000585914 1052 ntTSL 517.92■□□□□ 0.462e-6■■■□□ 17.9
DDX42Q86XP3 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC17.82■□□□□ 0.442e-6■■■□□ 17.9
DDX42Q86XP3 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC17.78■□□□□ 0.442e-6■■■□□ 17.9
DDX42Q86XP3 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC17.74■□□□□ 0.432e-6■■■□□ 17.9
DDX42Q86XP3 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC17.46■□□□□ 0.392e-6■■■□□ 17.9
DDX42Q86XP3 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC17.42■□□□□ 0.382e-6■■■□□ 17.9
DDX42Q86XP3 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC17.42■□□□□ 0.382e-6■■■□□ 17.9
DDX42Q86XP3 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.372e-6■■■□□ 17.9
DDX42Q86XP3 CIRBP-241ENST00000593048 650 ntTSL 317.13■□□□□ 0.332e-6■■■□□ 17.9
DDX42Q86XP3 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC17.07■□□□□ 0.322e-6■■■□□ 17.9
DDX42Q86XP3 CIRBP-228ENST00000590347 3117 ntTSL 216.86■□□□□ 0.292e-6■■■□□ 17.9
DDX42Q86XP3 CIRBP-230ENST00000591055 928 ntTSL 216.74■□□□□ 0.272e-6■■■□□ 17.9
DDX42Q86XP3 MICALL2-207ENST00000471899 899 ntTSL 216.65■□□□□ 0.262e-6■■■□□ 17.9
DDX42Q86XP3 CCNY-207ENST00000490012 793 ntTSL 316.45■□□□□ 0.222e-6■■■□□ 17.9
DDX42Q86XP3 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.212e-6■■■□□ 17.9
DDX42Q86XP3 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.162e-6■■■□□ 17.9
DDX42Q86XP3 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC15.84■□□□□ 0.132e-6■■■□□ 17.9
DDX42Q86XP3 CIRBP-242ENST00000593093 3528 ntTSL 215.79■□□□□ 0.122e-6■■■□□ 17.9
DDX42Q86XP3 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC15.39■□□□□ 0.052e-6■■■□□ 17.9
DDX42Q86XP3 MICALL2-202ENST00000413446 3046 ntTSL 214.81□□□□□ -0.042e-6■■■□□ 17.9
DDX42Q86XP3 CCNY-203ENST00000374704 3960 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.072e-6■■■□□ 17.9
DDX42Q86XP3 MICALL2-214ENST00000493998 404 ntTSL 213.6□□□□□ -0.232e-6■■■□□ 17.9
DDX42Q86XP3 CCNY-204ENST00000374706 3940 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.632e-6■■■□□ 17.9
DDX42Q86XP3 CIRBP-218ENST00000588344 370 ntTSL 39.52□□□□□ -0.892e-6■■■□□ 17.9
DDX42Q86XP3 CCNY-208ENST00000492478 809 ntTSL 59.29□□□□□ -0.922e-6■■■□□ 17.9
DDX42Q86XP3 CD46-214ENST00000480003 1258 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.821e-9■■■□□ 17.6
DDX42Q86XP3 CD46-202ENST00000322918 3124 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.861e-9■■■□□ 17.6
DDX42Q86XP3 CD46-206ENST00000360212 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.881e-9■■■□□ 17.6
DDX42Q86XP3 CD46-209ENST00000367047 3089 ntTSL 5 BASIC9.25□□□□□ -0.931e-9■■■□□ 17.6
DDX42Q86XP3 CD46-205ENST00000358170 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.961e-9■■■□□ 17.6
DDX42Q86XP3 CD46-208ENST00000367042 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.971e-9■■■□□ 17.6
DDX42Q86XP3 CD46-203ENST00000354848 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.031e-9■■■□□ 17.6
DDX42Q86XP3 CD46-201ENST00000322875 3278 ntAPPRIS P4 TSL 1 (best) BASIC8.56□□□□□ -1.041e-9■■■□□ 17.6
DDX42Q86XP3 CD46-207ENST00000367041 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.041e-9■■■□□ 17.6
DDX42Q86XP3 CD46-204ENST00000357714 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.061e-9■■■□□ 17.6
DDX42Q86XP3 CD46-212ENST00000469535 7826 ntTSL 1 (best)7.2□□□□□ -1.261e-9■■■□□ 17.6
DDX42Q86XP3 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.534e-7■■■□□ 17.6
DDX42Q86XP3 ANKRD10-210ENST00000494859 705 ntTSL 531.28■■■□□ 2.63e-7■■■□□ 17.4
DDX42Q86XP3 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC21.03■□□□□ 0.963e-7■■■□□ 17.4
DDX42Q86XP3 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.83e-7■■■□□ 17.4
DDX42Q86XP3 ANKRD10-206ENST00000465753 997 ntTSL 1 (best)19.99■□□□□ 0.793e-7■■■□□ 17.4
DDX42Q86XP3 ATF5-203ENST00000596658 722 ntTSL 219.14■□□□□ 0.651e-7■■■□□ 17.4
DDX42Q86XP3 ANKRD10-203ENST00000460846 535 ntTSL 313.73□□□□□ -0.213e-7■■■□□ 17.4
DDX42Q86XP3 THEM7P-201ENST00000419556 672 ntBASIC6.94□□□□□ -1.38e-9■■■□□ 17.4
DDX42Q86XP3 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC15.33■□□□□ 0.043e-6■■■□□ 17.4
DDX42Q86XP3 C22orf34-205ENST00000416411 542 ntTSL 414.47□□□□□ -0.093e-6■■■□□ 17.4
Retrieved 100 of 2,477 protein–RNA pairs in 271 ms