RNA–Protein interactions for RNA: ENST00000585914.5

CIRBP-206, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5

Gene CIRBP, Length 1,052 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-206ENST00000585914 NISCHQ9Y2I1 1504 aa42.28■■■■■ 4.36
CIRBP-206ENST00000585914 ABCC9O60706 1549 aa38.39■■■■□ 3.74
CIRBP-206ENST00000585914 CCDC180Q9P1Z9 1646 aa37.89■■■■□ 3.66
CIRBP-206ENST00000585914 RB1CC1Q8TDY2 1594 aa36.28■■■■□ 3.4
CIRBP-206ENST00000585914 DNAJC5BQ9UF47 199 aa36.21■■■■□ 3.39
CIRBP-206ENST00000585914 DCAF8L2P0C7V8 631 aa36.16■■■■□ 3.38
CIRBP-206ENST00000585914 NACADO15069 1562 aa35.94■■■■□ 3.34
CIRBP-206ENST00000585914 PABPN1Q86U42 306 aaKnown RBP eCLIP35.82■■■■□ 3.321e-14■■□□□ 14.3
CIRBP-206ENST00000585914 UNC13AQ9UPW8 1703 aa35.4■■■■□ 3.26
CIRBP-206ENST00000585914 MYO15BQ96JP2 1530 aa35.27■■■■□ 3.24
CIRBP-206ENST00000585914 BICRAQ9NZM4 1560 aa35.21■■■■□ 3.23
CIRBP-206ENST00000585914 ZCCHC6Q5VYS8 1495 aaKnown RBP34.97■■■■□ 3.19
CIRBP-206ENST00000585914 DCAF1Q9Y4B6 1507 aa34.77■■■■□ 3.16
CIRBP-206ENST00000585914 SCRIBQ14160 1630 aa34.73■■■■□ 3.15
CIRBP-206ENST00000585914 SHROOM4Q9ULL8 1493 aa34.58■■■■□ 3.13
CIRBP-206ENST00000585914 CC2D2AQ9P2K1 1620 aa34.55■■■■□ 3.12
CIRBP-206ENST00000585914 CECR2Q9BXF3 1484 aa34.54■■■■□ 3.12
CIRBP-206ENST00000585914 EIF4G1Q04637 1599 aaKnown RBP34.4■■■■□ 3.1
CIRBP-206ENST00000585914 DNAJC5Q9H3Z4 198 aa33.34■■■□□ 2.93
CIRBP-206ENST00000585914 NCAPD3P42695 1498 aa33.22■■■□□ 2.91
CIRBP-206ENST00000585914 ERCC6Q03468 1493 aa33.16■■■□□ 2.9
CIRBP-206ENST00000585914 ATAD2BQ9ULI0 1458 aa33.14■■■□□ 2.9
CIRBP-206ENST00000585914 SMARCA4P51532 1647 aa33.01■■■□□ 2.87
CIRBP-206ENST00000585914 CUX2O14529 1486 aa32.99■■■□□ 2.87
CIRBP-206ENST00000585914 SMARCA2P51531 1590 aa32.98■■■□□ 2.87
CIRBP-206ENST00000585914 HMGXB3Q12766 1538 aa32.9■■■□□ 2.86
CIRBP-206ENST00000585914 NESP48681 1621 aa32.9■■■□□ 2.86
CIRBP-206ENST00000585914 BAZ1BQ9UIG0 1483 aaKnown RBP32.84■■■□□ 2.85
CIRBP-206ENST00000585914 BAZ1AQ9NRL2 1556 aaPredicted RBP32.82■■■□□ 2.84
CIRBP-206ENST00000585914 MROH2BQ7Z745 1585 aa32.63■■■□□ 2.81
CIRBP-206ENST00000585914 PEG3Q9GZU2 1588 aa32.58■■■□□ 2.81
CIRBP-206ENST00000585914 LAMC3Q9Y6N6 1575 aa32.48■■■□□ 2.79
CIRBP-206ENST00000585914 THOC2Q8NI27 1593 aaKnown RBP32.45■■■□□ 2.78
CIRBP-206ENST00000585914 PDS5BQ9NTI5 1447 aa32.38■■■□□ 2.77
CIRBP-206ENST00000585914 KIF21AQ7Z4S6 1674 aa32.36■■■□□ 2.77
CIRBP-206ENST00000585914 CADPSQ9ULU8 1353 aa32.27■■■□□ 2.76
CIRBP-206ENST00000585914 WIZO95785 1651 aa32.23■■■□□ 2.75
CIRBP-206ENST00000585914 MRC2Q9UBG0 1479 aa32.11■■■□□ 2.73
CIRBP-206ENST00000585914 TRIM41Q8WV44 630 aa32.01■■■□□ 2.71
CIRBP-206ENST00000585914 WDR62O43379 1518 aa31.96■■■□□ 2.71
CIRBP-206ENST00000585914 CEP164Q9UPV0 1460 aa31.96■■■□□ 2.71
CIRBP-206ENST00000585914 FANCD2Q9BXW9 1451 aa31.92■■■□□ 2.7
CIRBP-206ENST00000585914 RSF1Q96T23 1441 aaPredicted RBP31.89■■■□□ 2.7
CIRBP-206ENST00000585914 CFTRP13569 1480 aa31.8■■■□□ 2.68
CIRBP-206ENST00000585914 TOP2AP11388 1531 aaKnown RBP31.75■■■□□ 2.67
CIRBP-206ENST00000585914 URB2Q14146 1524 aaKnown RBP31.65■■■□□ 2.66
CIRBP-206ENST00000585914 OSCARQ8IYS5 282 aa31.63■■■□□ 2.65
CIRBP-206ENST00000585914 CCDC88BA6NC98 1476 aa31.46■■■□□ 2.63
CIRBP-206ENST00000585914 ZNF608Q9ULD9 1512 aaPredicted RBP31.34■■■□□ 2.61
CIRBP-206ENST00000585914 PRDM2Q13029 1718 aa31.34■■■□□ 2.61
CIRBP-206ENST00000585914 IFT140Q96RY7 1462 aa31.3■■■□□ 2.6
CIRBP-206ENST00000585914 TOPBP1Q92547 1522 aa31.27■■■□□ 2.6
CIRBP-206ENST00000585914 RIMBP3CA6NJZ7 1639 aa31.13■■■□□ 2.57
CIRBP-206ENST00000585914 RIMBP3BA6NNM3 1639 aa31.13■■■□□ 2.57
CIRBP-206ENST00000585914 RIMBP3Q9UFD9 1639 aa31.13■■■□□ 2.57
CIRBP-206ENST00000585914 ABCC8Q09428 1581 aa31.12■■■□□ 2.57
CIRBP-206ENST00000585914 DNMBPQ6XZF7 1577 aa31.09■■■□□ 2.57
CIRBP-206ENST00000585914 EIF4G3O43432 1585 aaKnown RBP31.08■■■□□ 2.57
CIRBP-206ENST00000585914 AQRO60306 1485 aaKnown RBP eCLIP31.07■■■□□ 2.562e-10■■■■■ 31.7
CIRBP-206ENST00000585914 FBLN2P98095 1184 aa31.06■■■□□ 2.56
CIRBP-206ENST00000585914 ARHGEF11O15085 1522 aa31.03■■■□□ 2.56
CIRBP-206ENST00000585914 CYB5RLQ6IPT4 315 aa30.99■■■□□ 2.55
CIRBP-206ENST00000585914 POLA1P09884 1462 aaPredicted RBP30.94■■■□□ 2.54
CIRBP-206ENST00000585914 TARBP1Q13395 1621 aaKnown RBP30.93■■■□□ 2.54
CIRBP-206ENST00000585914 RAD54L2Q9Y4B4 1467 aa30.91■■■□□ 2.54
CIRBP-206ENST00000585914 CHD1O14646 1710 aa30.88■■■□□ 2.53
CIRBP-206ENST00000585914 TDRD9Q8NDG6 1382 aaKnown RBP30.88■■■□□ 2.53
CIRBP-206ENST00000585914 SOGA1O94964 1423 aa30.86■■■□□ 2.53
CIRBP-206ENST00000585914 TRHP20396 242 aaPredicted RBP30.77■■■□□ 2.52
CIRBP-206ENST00000585914 FGD5Q6ZNL6 1462 aa30.75■■■□□ 2.51
CIRBP-206ENST00000585914 ARAP1Q96P48 1450 aa30.72■■■□□ 2.51
CIRBP-206ENST00000585914 CHMP7Q8WUX9 453 aaPredicted RBP30.71■■■□□ 2.51
CIRBP-206ENST00000585914 SNAPC4Q5SXM2 1469 aa30.7■■■□□ 2.51
CIRBP-206ENST00000585914 CUX1P39880 1505 aa30.66■■■□□ 2.5
CIRBP-206ENST00000585914 SUPT5HO00267 1087 aaKnown RBP30.59■■■□□ 2.49
CIRBP-206ENST00000585914 GRIN2BQ13224 1484 aa30.55■■■□□ 2.48
CIRBP-206ENST00000585914 MAGI1Q96QZ7 1491 aaPredicted RBP30.52■■■□□ 2.48
CIRBP-206ENST00000585914 WDR97A6NE52 1622 aa30.5■■■□□ 2.47
CIRBP-206ENST00000585914 SYNJ1O43426 1573 aa30.49■■■□□ 2.47
CIRBP-206ENST00000585914 CLASP1Q7Z460 1538 aa30.49■■■□□ 2.47
CIRBP-206ENST00000585914 SYNJ2O15056 1496 aa30.46■■■□□ 2.47
CIRBP-206ENST00000585914 GAPVD1Q14C86 1478 aa30.44■■■□□ 2.46
CIRBP-206ENST00000585914 PBRM1Q86U86 1689 aa30.36■■■□□ 2.45
CIRBP-206ENST00000585914 ABCA10Q8WWZ4 1543 aa30.31■■■□□ 2.44
CIRBP-206ENST00000585914 ABCA5Q8WWZ7 1642 aa30.25■■■□□ 2.43
CIRBP-206ENST00000585914 WRNQ14191 1432 aaPredicted RBP eCLIP30.22■■■□□ 2.431e-6■■■■■ 58.5
CIRBP-206ENST00000585914 GRIN2AQ12879 1464 aa30.15■■■□□ 2.42
CIRBP-206ENST00000585914 ERCC6L2Q5T890 1561 aa30.11■■■□□ 2.41
CIRBP-206ENST00000585914 ADAMTS12P58397 1594 aa30.07■■■□□ 2.4
CIRBP-206ENST00000585914 CEP170Q5SW79 1584 aa30.05■■■□□ 2.4
CIRBP-206ENST00000585914 TOP2BQ02880 1626 aa30.04■■■□□ 2.4
CIRBP-206ENST00000585914 FHAD1B1AJZ9 1412 aa30.03■■■□□ 2.4
CIRBP-206ENST00000585914 AEBP2Q6ZN18 517 aaPredicted RBP30.02■■■□□ 2.4
CIRBP-206ENST00000585914 BIVM-ERCC5R4GMW8 1640 aa30.02■■■□□ 2.4
CIRBP-206ENST00000585914 NUP160Q12769 1436 aa30.02■■■□□ 2.4
CIRBP-206ENST00000585914 ERICH3Q5RHP9 1530 aa29.91■■■□□ 2.38
CIRBP-206ENST00000585914 PRG4Q92954 1404 aaPredicted RBP29.87■■■□□ 2.37
CIRBP-206ENST00000585914 JPH4Q96JJ6 628 aa29.86■■■□□ 2.37
CIRBP-206ENST00000585914 SHROOM2Q13796 1616 aa29.84■■■□□ 2.37
CIRBP-206ENST00000585914 NPM1P06748 294 aaKnown RBP eCLIP29.68■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms