RNA–Protein interactions for RNA: ENST00000589686.5

CIRBP-224, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-224ENST00000589686 NISCHQ9Y2I1 1504 aa51.47■■■■■ 5.83
CIRBP-224ENST00000589686 CCDC180Q9P1Z9 1646 aa45.87■■■■■ 4.93
CIRBP-224ENST00000589686 ABCC9O60706 1549 aa45.16■■■■■ 4.82
CIRBP-224ENST00000589686 RB1CC1Q8TDY2 1594 aa43.34■■■■■ 4.53
CIRBP-224ENST00000589686 NACADO15069 1562 aa43.23■■■■■ 4.51
CIRBP-224ENST00000589686 DCAF8L2P0C7V8 631 aa43.17■■■■■ 4.5
CIRBP-224ENST00000589686 MYO15BQ96JP2 1530 aa42.89■■■■■ 4.46
CIRBP-224ENST00000589686 ZCCHC6Q5VYS8 1495 aaKnown RBP42.81■■■■■ 4.44
CIRBP-224ENST00000589686 DCAF1Q9Y4B6 1507 aa42.59■■■■■ 4.41
CIRBP-224ENST00000589686 UNC13AQ9UPW8 1703 aa42.28■■■■■ 4.36
CIRBP-224ENST00000589686 PABPN1Q86U42 306 aaKnown RBP eCLIP42.18■■■■■ 4.34
CIRBP-224ENST00000589686 BICRAQ9NZM4 1560 aa42.01■■■■■ 4.32
CIRBP-224ENST00000589686 SCRIBQ14160 1630 aa41.81■■■■■ 4.28
CIRBP-224ENST00000589686 DNAJC5BQ9UF47 199 aa41.73■■■■■ 4.27
CIRBP-224ENST00000589686 SHROOM4Q9ULL8 1493 aa41.6■■■■■ 4.25
CIRBP-224ENST00000589686 EIF4G1Q04637 1599 aaKnown RBP40.94■■■■■ 4.14
CIRBP-224ENST00000589686 CC2D2AQ9P2K1 1620 aa40.83■■■■■ 4.13
CIRBP-224ENST00000589686 CECR2Q9BXF3 1484 aa40.64■■■■■ 4.1
CIRBP-224ENST00000589686 SMARCA4P51532 1647 aa39.98■■■■□ 3.99
CIRBP-224ENST00000589686 BAZ1AQ9NRL2 1556 aaPredicted RBP39.93■■■■□ 3.98
CIRBP-224ENST00000589686 NCAPD3P42695 1498 aa39.9■■■■□ 3.98
CIRBP-224ENST00000589686 ATAD2BQ9ULI0 1458 aa39.87■■■■□ 3.97
CIRBP-224ENST00000589686 SMARCA2P51531 1590 aa39.8■■■■□ 3.96
CIRBP-224ENST00000589686 HMGXB3Q12766 1538 aa39.65■■■■□ 3.94
CIRBP-224ENST00000589686 MROH2BQ7Z745 1585 aa39.65■■■■□ 3.94
CIRBP-224ENST00000589686 PEG3Q9GZU2 1588 aa39.61■■■■□ 3.93
CIRBP-224ENST00000589686 BAZ1BQ9UIG0 1483 aaKnown RBP39.52■■■■□ 3.92
CIRBP-224ENST00000589686 WIZO95785 1651 aa39.19■■■■□ 3.86
CIRBP-224ENST00000589686 RSF1Q96T23 1441 aaPredicted RBP39.12■■■■□ 3.85
CIRBP-224ENST00000589686 NESP48681 1621 aa38.99■■■■□ 3.83
CIRBP-224ENST00000589686 ERCC6Q03468 1493 aa38.98■■■■□ 3.83
CIRBP-224ENST00000589686 LAMC3Q9Y6N6 1575 aa38.87■■■■□ 3.81
CIRBP-224ENST00000589686 TOP2AP11388 1531 aaKnown RBP38.78■■■■□ 3.8
CIRBP-224ENST00000589686 CADPSQ9ULU8 1353 aa38.73■■■■□ 3.79
CIRBP-224ENST00000589686 CUX2O14529 1486 aa38.67■■■■□ 3.78
CIRBP-224ENST00000589686 PDS5BQ9NTI5 1447 aa38.66■■■■□ 3.78
CIRBP-224ENST00000589686 KIF21AQ7Z4S6 1674 aa38.49■■■■□ 3.75
CIRBP-224ENST00000589686 THOC2Q8NI27 1593 aaKnown RBP38.44■■■■□ 3.74
CIRBP-224ENST00000589686 CFTRP13569 1480 aa38.42■■■■□ 3.74
CIRBP-224ENST00000589686 CCDC88BA6NC98 1476 aa38.35■■■■□ 3.73
CIRBP-224ENST00000589686 FANCD2Q9BXW9 1451 aa38.27■■■■□ 3.72
CIRBP-224ENST00000589686 MRC2Q9UBG0 1479 aa38.25■■■■□ 3.71
CIRBP-224ENST00000589686 CEP164Q9UPV0 1460 aa38.25■■■■□ 3.71
CIRBP-224ENST00000589686 WDR62O43379 1518 aa38.12■■■■□ 3.69
CIRBP-224ENST00000589686 PRDM2Q13029 1718 aa38.05■■■■□ 3.68
CIRBP-224ENST00000589686 SUPT5HO00267 1087 aaKnown RBP37.93■■■■□ 3.66
CIRBP-224ENST00000589686 URB2Q14146 1524 aaKnown RBP37.89■■■■□ 3.66
CIRBP-224ENST00000589686 DNAJC5Q9H3Z4 198 aa37.85■■■■□ 3.65
CIRBP-224ENST00000589686 ABCC8Q09428 1581 aa37.63■■■■□ 3.62
CIRBP-224ENST00000589686 TOPBP1Q92547 1522 aa37.61■■■■□ 3.61
CIRBP-224ENST00000589686 DNMBPQ6XZF7 1577 aa37.54■■■■□ 3.6
CIRBP-224ENST00000589686 IFT140Q96RY7 1462 aa37.46■■■■□ 3.59
CIRBP-224ENST00000589686 ZNF608Q9ULD9 1512 aaPredicted RBP37.3■■■■□ 3.56
CIRBP-224ENST00000589686 POLA1P09884 1462 aaPredicted RBP37.27■■■■□ 3.56
CIRBP-224ENST00000589686 CUX1P39880 1505 aa37.22■■■■□ 3.55
CIRBP-224ENST00000589686 TARBP1Q13395 1621 aaKnown RBP37.21■■■■□ 3.55
CIRBP-224ENST00000589686 SOGA1O94964 1423 aa37.15■■■■□ 3.54
CIRBP-224ENST00000589686 FGD5Q6ZNL6 1462 aa37.14■■■■□ 3.54
CIRBP-224ENST00000589686 RAD54L2Q9Y4B4 1467 aa37.12■■■■□ 3.53
CIRBP-224ENST00000589686 EIF4G3O43432 1585 aaKnown RBP37.12■■■■□ 3.53
CIRBP-224ENST00000589686 AQRO60306 1485 aaKnown RBP eCLIP37.07■■■■□ 3.521e-9■■■■■ 30.9
CIRBP-224ENST00000589686 OSCARQ8IYS5 282 aa37.06■■■■□ 3.52
CIRBP-224ENST00000589686 TDRD9Q8NDG6 1382 aaKnown RBP36.96■■■■□ 3.51
CIRBP-224ENST00000589686 WDR97A6NE52 1622 aa36.92■■■■□ 3.5
CIRBP-224ENST00000589686 WRNQ14191 1432 aaPredicted RBP eCLIP36.9■■■■□ 3.51e-6■■■■■ 58.5
CIRBP-224ENST00000589686 TOP2BQ02880 1626 aa36.82■■■■□ 3.49
CIRBP-224ENST00000589686 BIVM-ERCC5R4GMW8 1640 aa36.81■■■■□ 3.48
CIRBP-224ENST00000589686 ABCA10Q8WWZ4 1543 aa36.78■■■■□ 3.48
CIRBP-224ENST00000589686 SYNJ1O43426 1573 aa36.78■■■■□ 3.48
CIRBP-224ENST00000589686 GRIN2BQ13224 1484 aa36.74■■■■□ 3.47
CIRBP-224ENST00000589686 FBLN2P98095 1184 aa36.71■■■■□ 3.47
CIRBP-224ENST00000589686 GAPVD1Q14C86 1478 aa36.7■■■■□ 3.47
CIRBP-224ENST00000589686 SNAPC4Q5SXM2 1469 aa36.7■■■■□ 3.47
CIRBP-224ENST00000589686 CHD1O14646 1710 aa36.69■■■■□ 3.46
CIRBP-224ENST00000589686 MAGI1Q96QZ7 1491 aaPredicted RBP36.67■■■■□ 3.46
CIRBP-224ENST00000589686 ABCA5Q8WWZ7 1642 aa36.63■■■■□ 3.45
CIRBP-224ENST00000589686 PBRM1Q86U86 1689 aa36.58■■■■□ 3.45
CIRBP-224ENST00000589686 CHMP7Q8WUX9 453 aaPredicted RBP36.58■■■■□ 3.45
CIRBP-224ENST00000589686 SYNJ2O15056 1496 aa36.53■■■■□ 3.44
CIRBP-224ENST00000589686 TRIM41Q8WV44 630 aa36.46■■■■□ 3.43
CIRBP-224ENST00000589686 RIMBP3CA6NJZ7 1639 aa36.42■■■■□ 3.42
CIRBP-224ENST00000589686 RIMBP3BA6NNM3 1639 aa36.42■■■■□ 3.42
CIRBP-224ENST00000589686 RIMBP3Q9UFD9 1639 aa36.42■■■■□ 3.42
CIRBP-224ENST00000589686 ARHGEF11O15085 1522 aa36.4■■■■□ 3.42
CIRBP-224ENST00000589686 ERICH3Q5RHP9 1530 aa36.34■■■■□ 3.41
CIRBP-224ENST00000589686 CLASP1Q7Z460 1538 aa36.32■■■■□ 3.4
CIRBP-224ENST00000589686 ADAMTS12P58397 1594 aa36.3■■■■□ 3.4
CIRBP-224ENST00000589686 FHAD1B1AJZ9 1412 aa36.28■■■■□ 3.4
CIRBP-224ENST00000589686 GRIN2AQ12879 1464 aa36.25■■■■□ 3.39
CIRBP-224ENST00000589686 KIF27Q86VH2 1401 aa36.17■■■■□ 3.38
CIRBP-224ENST00000589686 CYB5RLQ6IPT4 315 aa36.12■■■■□ 3.37
CIRBP-224ENST00000589686 NUP160Q12769 1436 aa36.11■■■■□ 3.37
CIRBP-224ENST00000589686 ARAP1Q96P48 1450 aa36.08■■■■□ 3.37
CIRBP-224ENST00000589686 CEP170Q5SW79 1584 aa36.06■■■■□ 3.36
CIRBP-224ENST00000589686 IGF1RP08069 1367 aa36.05■■■■□ 3.36
CIRBP-224ENST00000589686 CUL7Q14999 1698 aa35.94■■■■□ 3.34
CIRBP-224ENST00000589686 SHROOM2Q13796 1616 aa35.84■■■■□ 3.33
CIRBP-224ENST00000589686 CARMIL1Q5VZK9 1371 aa35.84■■■■□ 3.33
CIRBP-224ENST00000589686 JPH4Q96JJ6 628 aa35.78■■■■□ 3.32
CIRBP-224ENST00000589686 ERCC6L2Q5T890 1561 aa35.77■■■■□ 3.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms