Protein–RNA interactions for Protein: Q86XP3

DDX42, ATP-dependent RNA helicase DDX42, humanhuman

Known RBP eCLIP

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42Q86XP3 FP236383.1-201ENST00000623860 2498 ntTSL 2 BASIC13.27□□□□□ -0.291e-6■■■■■ 217.1
DDX42Q86XP3 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.199e-8■■■■■ 81.4
DDX42Q86XP3 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.49□□□□□ -1.699e-8■■■■■ 81.4
DDX42Q86XP3 NEDD4-209ENST00000508871 5707 ntTSL 1 (best)4.47□□□□□ -1.699e-8■■■■■ 81.4
DDX42Q86XP3 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.11□□□□□ -1.919e-8■■■■■ 81.4
DDX42Q86XP3 NEDD4-204ENST00000503468 6339 ntTSL 1 (best)2.91□□□□□ -1.949e-8■■■■■ 81.4
DDX42Q86XP3 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.5□□□□□ -2.019e-8■■■■■ 81.4
DDX42Q86XP3 WDR74-208ENST00000538098 548 ntTSL 418.54■□□□□ 0.568e-23■■■■■ 79
DDX42Q86XP3 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.448e-23■■■■■ 79
DDX42Q86XP3 RNU2-2P-201ENST00000410396 191 ntBASIC2.09□□□□□ -2.078e-23■■■■■ 79
DDX42Q86XP3 SNORD3B-1-201ENST00000577988 758 ntBASIC14.63□□□□□ -0.074e-12■■■■■ 60.5
DDX42Q86XP3 SNORD3B-1-203ENST00000631292 217 nt11.64□□□□□ -0.554e-12■■■■■ 60.5
DDX42Q86XP3 SNORD3B-1-202ENST00000617128 218 nt11.52□□□□□ -0.574e-12■■■■■ 60.5
DDX42Q86XP3 YPEL3-208ENST00000566401 522 ntTSL 320.34■□□□□ 0.856e-10■■■■■ 46
DDX42Q86XP3 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC20.34■□□□□ 0.856e-10■■■■■ 46
DDX42Q86XP3 YPEL3-205ENST00000565110 575 ntTSL 520.33■□□□□ 0.856e-10■■■■■ 46
DDX42Q86XP3 YPEL3-206ENST00000565479 865 ntTSL 520.08■□□□□ 0.816e-10■■■■■ 46
DDX42Q86XP3 YPEL3-210ENST00000568674 371 ntTSL 219.73■□□□□ 0.756e-10■■■■■ 46
DDX42Q86XP3 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.746e-10■■■■■ 46
DDX42Q86XP3 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC19.5■□□□□ 0.716e-10■■■■■ 46
DDX42Q86XP3 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.656e-10■■■■■ 46
DDX42Q86XP3 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.556e-10■■■■■ 46
DDX42Q86XP3 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.32■□□□□ 0.366e-10■■■■■ 46
DDX42Q86XP3 YPEL3-211ENST00000568681 1739 ntTSL 216.45■□□□□ 0.226e-10■■■■■ 46
DDX42Q86XP3 LINC00854-214ENST00000615433 874 ntAPPRIS ALT2 TSL 59.82□□□□□ -0.841e-42■■■■■ 42.3
DDX42Q86XP3 LINC00854-204ENST00000594691 649 ntAPPRIS P5 TSL 5 BASIC9.14□□□□□ -0.951e-42■■■■■ 42.3
DDX42Q86XP3 U2.6-201ENST00000619225 191 ntBASIC2.7□□□□□ -1.981e-42■■■■■ 42.3
DDX42Q86XP3 TFG-205ENST00000479672 776 ntTSL 324.6■■□□□ 1.536e-9■■■■■ 41.4
DDX42Q86XP3 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC22.78■■□□□ 1.246e-9■■■■■ 41.4
DDX42Q86XP3 TFG-210ENST00000620299 1289 ntTSL 5 BASIC22.14■■□□□ 1.136e-9■■■■■ 41.4
DDX42Q86XP3 TFG-207ENST00000487505 913 ntTSL 319.27■□□□□ 0.686e-9■■■■■ 41.4
DDX42Q86XP3 TFG-203ENST00000463568 723 ntTSL 318.06■□□□□ 0.486e-9■■■■■ 41.4
DDX42Q86XP3 TFG-208ENST00000490574 1696 ntAPPRIS P3 TSL 3 BASIC13.75□□□□□ -0.216e-9■■■■■ 41.4
DDX42Q86XP3 TFG-202ENST00000418917 1716 ntAPPRIS ALT1 TSL 3 BASIC13.4□□□□□ -0.266e-9■■■■■ 41.4
DDX42Q86XP3 TFG-204ENST00000476228 1783 ntAPPRIS ALT1 TSL 1 (best) BASIC9.03□□□□□ -0.966e-9■■■■■ 41.4
DDX42Q86XP3 RICTOR-206ENST00000510711 3126 ntTSL 210.7□□□□□ -0.72e-7■■■■■ 39.7
DDX42Q86XP3 RICTOR-209ENST00000514735 686 ntTSL 38.21□□□□□ -1.12e-7■■■■■ 39.7
DDX42Q86XP3 RICTOR-208ENST00000513566 1762 ntTSL 1 (best)7.06□□□□□ -1.282e-7■■■■■ 39.7
DDX42Q86XP3 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.47□□□□□ -1.852e-7■■■■■ 39.7
DDX42Q86XP3 RICTOR-207ENST00000511516 7312 ntTSL 1 (best)2.77□□□□□ -1.972e-7■■■■■ 39.7
DDX42Q86XP3 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.982e-7■■■■■ 39.7
DDX42Q86XP3 HERPUD1-215ENST00000568676 571 ntTSL 216.84■□□□□ 0.292e-8■■■■■ 39.1
DDX42Q86XP3 HERPUD1-205ENST00000562914 570 ntTSL 216.84■□□□□ 0.292e-8■■■■■ 39.1
DDX42Q86XP3 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.222e-8■■■■■ 39.1
DDX42Q86XP3 HERPUD1-219ENST00000570273 1425 ntTSL 1 (best)15.94■□□□□ 0.142e-8■■■■■ 39.1
DDX42Q86XP3 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.032e-8■■■■■ 39.1
DDX42Q86XP3 HERPUD1-210ENST00000565966 798 ntTSL 514.56□□□□□ -0.082e-8■■■■■ 39.1
DDX42Q86XP3 HERPUD1-218ENST00000569569 1125 ntTSL 214.56□□□□□ -0.082e-8■■■■■ 39.1
DDX42Q86XP3 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC14.55□□□□□ -0.082e-8■■■■■ 39.1
DDX42Q86XP3 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC13.93□□□□□ -0.182e-8■■■■■ 39.1
DDX42Q86XP3 HNRNPK-209ENST00000483135 900 ntTSL 26.71□□□□□ -1.343e-7■■■■■ 38.1
DDX42Q86XP3 HNRNPK-207ENST00000472778 822 ntTSL 36.71□□□□□ -1.343e-7■■■■■ 38.1
DDX42Q86XP3 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC16.61■□□□□ 0.256e-8■■■■■ 36.8
DDX42Q86XP3 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.086e-8■■■■■ 36.8
DDX42Q86XP3 DIP2A-208ENST00000478105 3234 ntTSL 212.78□□□□□ -0.366e-8■■■■■ 36.8
DDX42Q86XP3 DIP2A-202ENST00000417564 6967 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.676e-8■■■■■ 36.8
DDX42Q86XP3 ASNS-210ENST00000448127 579 ntTSL 29.49□□□□□ -0.897e-15■■■■■ 36.8
DDX42Q86XP3 ASNS-211ENST00000451771 562 ntTSL 220.16■□□□□ 0.821e-9■■■■■ 36.1
DDX42Q86XP3 ASNS-212ENST00000453600 573 ntTSL 315.25■□□□□ 0.031e-9■■■■■ 36.1
DDX42Q86XP3 ARFGAP2-227ENST00000533243 1558 ntTSL 221.22■□□□□ 0.994e-7■■■■■ 35.7
DDX42Q86XP3 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC19.3■□□□□ 0.684e-7■■■■■ 35.7
DDX42Q86XP3 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC17.1■□□□□ 0.334e-7■■■■■ 35.7
DDX42Q86XP3 ARFGAP2-212ENST00000527097 942 ntTSL 216.44■□□□□ 0.224e-7■■■■■ 35.7
DDX42Q86XP3 ARFGAP2-220ENST00000529455 840 ntTSL 516.19■□□□□ 0.184e-7■■■■■ 35.7
DDX42Q86XP3 ARFGAP2-207ENST00000525398 1000 ntTSL 315.24■□□□□ 0.034e-7■■■■■ 35.7
DDX42Q86XP3 ARFGAP2-226ENST00000532478 940 ntTSL 514.63□□□□□ -0.074e-7■■■■■ 35.7
DDX42Q86XP3 ARFGAP2-217ENST00000528444 730 ntTSL 514.63□□□□□ -0.074e-7■■■■■ 35.7
DDX42Q86XP3 ARFGAP2-206ENST00000525314 785 ntTSL 314.39□□□□□ -0.114e-7■■■■■ 35.7
DDX42Q86XP3 ARFGAP2-224ENST00000531750 649 ntTSL 414.39□□□□□ -0.114e-7■■■■■ 35.7
DDX42Q86XP3 ARFGAP2-201ENST00000395449 1772 ntTSL 513.91□□□□□ -0.184e-7■■■■■ 35.7
DDX42Q86XP3 ARFGAP2-214ENST00000527927 850 ntTSL 512.8□□□□□ -0.364e-7■■■■■ 35.7
DDX42Q86XP3 ARFGAP2-225ENST00000532438 740 ntTSL 412.26□□□□□ -0.454e-7■■■■■ 35.7
DDX42Q86XP3 ARFGAP2-205ENST00000524782 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.524e-7■■■■■ 35.7
DDX42Q86XP3 ARFGAP2-210ENST00000526342 474 ntTSL 59.99□□□□□ -0.814e-7■■■■■ 35.7
DDX42Q86XP3 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC7.49□□□□□ -1.214e-7■■■■■ 35.7
DDX42Q86XP3 ASNS-204ENST00000414884 584 ntTSL 220.07■□□□□ 0.82e-11■■■■■ 35.7
DDX42Q86XP3 ASNS-208ENST00000442734 828 ntTSL 216.58■□□□□ 0.242e-11■■■■■ 35.7
DDX42Q86XP3 ANKRD12-206ENST00000577992 390 ntTSL 323.84■■□□□ 1.412e-7■■■■■ 34.5
DDX42Q86XP3 SLC37A3-204ENST00000460560 2111 ntTSL 519.27■□□□□ 0.672e-7■■■■■ 34.5
DDX42Q86XP3 TVP23C-CDRT4-204ENST00000557349 1005 ntTSL 217.6■□□□□ 0.412e-7■■■■■ 34.5
DDX42Q86XP3 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.51■□□□□ 0.392e-7■■■■■ 34.5
DDX42Q86XP3 ANKRD12-209ENST00000585234 313 ntTSL 315.31■□□□□ 0.042e-7■■■■■ 34.5
DDX42Q86XP3 SLC37A3-216ENST00000484416 538 ntTSL 414.56□□□□□ -0.082e-7■■■■■ 34.5
DDX42Q86XP3 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.082e-7■■■■■ 34.5
DDX42Q86XP3 TVP23C-CDRT4-203ENST00000522212 2833 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.092e-7■■■■■ 34.5
DDX42Q86XP3 ANKRD12-204ENST00000540578 1338 ntTSL 1 (best)14.07□□□□□ -0.162e-7■■■■■ 34.5
DDX42Q86XP3 AKNA-203ENST00000312033 3334 ntTSL 1 (best) BASIC13.78□□□□□ -0.22e-6■■■■■ 34.5
DDX42Q86XP3 SLC37A3-203ENST00000447932 3254 ntTSL 1 (best) BASIC13.32□□□□□ -0.282e-7■■■■■ 34.5
DDX42Q86XP3 SLC37A3-222ENST00000490760 574 ntTSL 512.33□□□□□ -0.442e-7■■■■■ 34.5
DDX42Q86XP3 SLC37A3-220ENST00000485861 534 ntTSL 311.94□□□□□ -0.52e-7■■■■■ 34.5
DDX42Q86XP3 ANKRD12-207ENST00000581635 631 ntTSL 411.81□□□□□ -0.522e-7■■■■■ 34.5
DDX42Q86XP3 SLC37A3-215ENST00000477571 3488 ntTSL 510.86□□□□□ -0.672e-7■■■■■ 34.5
DDX42Q86XP3 CDRT4-203ENST00000524205 632 ntAPPRIS ALT2 TSL 210.81□□□□□ -0.682e-7■■■■■ 34.5
DDX42Q86XP3 SLC37A3-202ENST00000340308 2955 ntTSL 1 (best) BASIC8.91□□□□□ -0.982e-7■■■■■ 34.5
DDX42Q86XP3 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.312e-7■■■■■ 34.5
DDX42Q86XP3 TVP23C-CDRT4-201ENST00000481756 556 ntTSL 46.57□□□□□ -1.362e-7■■■■■ 34.5
DDX42Q86XP3 SLC37A3-219ENST00000485734 578 ntTSL 44.8□□□□□ -1.642e-7■■■■■ 34.5
DDX42Q86XP3 MIR6758-201ENST00000620653 63 ntBASIC4.74□□□□□ -1.652e-7■■■■■ 34.5
DDX42Q86XP3 TVP23C-CDRT4-202ENST00000518506 520 ntTSL 52.62□□□□□ -1.992e-7■■■■■ 34.5
DDX42Q86XP3 SRSF6-202ENST00000483871 1680 ntTSL 214.64□□□□□ -0.072e-10■■■■■ 33.6
Retrieved 100 of 2,477 protein–RNA pairs in 29.6 ms